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Petr Smirnov
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Journal Articles
- 2022
- [j11]Petr Smirnov, Ian Smith, Zhaleh Safikhani, Wail Ba-alawi, Farnoosh Khodakarami, Eva Lin, Yihong Yu, Scott Martin, Janosch Ortmann, Tero Aittokallio
, Marc Hafner, Benjamin Haibe-Kains:
Evaluation of statistical approaches for association testing in noisy drug screening data. BMC Bioinform. 23(1): 188 (2022) - [j10]Nikta Feizi, Sisira Kadambat Nair
, Petr Smirnov
, Gangesh Beri, Christopher Eeles, Parinaz Nasr Esfahani, Minoru Nakano, Denis Tkachuk, Anthony Mammoliti, Evgeniya Gorobets, Arvind Singh Mer
, Eva Lin, Yihong Yu, Scott Martin, Marc Hafner
, Benjamin Haibe-Kains
:
PharmacoDB 2.0: improving scalability and transparency of in vitro pharmacogenomics analysis. Nucleic Acids Res. 50(D1): 1348-1357 (2022) - 2021
- [j9]Hossein Sharifi-Noghabi
, Soheil Jahangiri-Tazehkand, Petr Smirnov, Casey Hon, Anthony Mammoliti, Sisira Kadambat Nair
, Arvind Singh Mer
, Martin Ester, Benjamin Haibe-Kains
:
Drug sensitivity prediction from cell line-based pharmacogenomics data: guidelines for developing machine learning models. Briefings Bioinform. 22(6) (2021) - [j8]Dmitry Itsykson, Artur Riazanov, Danil Sagunov, Petr Smirnov
:
Near-Optimal Lower Bounds on Regular Resolution Refutations of Tseitin Formulas for All Constant-Degree Graphs. Comput. Complex. 30(2): 13 (2021) - [j7]Dmitry Itsykson, Artur Riazanov, Danil Sagunov, Petr Smirnov
:
Correction to: Near-Optimal Lower Bounds on Regular Resolution Refutations of Tseitin Formulas for All Constant-Degree Graphs. Comput. Complex. 30(2): 16 (2021) - 2020
- [j6]Sisira Kadambat Nair
, Christopher Eeles, Chantal Ho, Gangesh Beri, Esther Yoo
, Denis Tkachuk, Amy Tang, Parwaiz Nijrabi, Petr Smirnov
, Heewon Seo
, Danyel Jennen, Benjamin Haibe-Kains
:
ToxicoDB: an integrated database to mine and visualize large-scale toxicogenomic datasets. Nucleic Acids Res. 48(Webserver-Issue): W455-W462 (2020) - 2019
- [j5]Ladislav Rampásek
, Daniel Hidru, Petr Smirnov
, Benjamin Haibe-Kains
, Anna Goldenberg
:
Dr.VAE: improving drug response prediction via modeling of drug perturbation effects. Bioinform. 35(19): 3743-3751 (2019) - 2018
- [j4]Fupan Yao, Seyed Ali Madani Tonekaboni, Zhaleh Safikhani, Petr Smirnov, Nehme El-Hachem
, Mark Freeman, Venkata Satya Kumar Manem, Benjamin Haibe-Kains
:
Tissue specificity of in vitro drug sensitivity. J. Am. Medical Informatics Assoc. 25(2): 158-166 (2018) - [j3]Petr Smirnov, Victor Kofia, Alexander Maru, Mark Freeman, Chantal Ho, Nehme El-Hachem
, George-Alexandru Adam, Wail Ba-alawi
, Zhaleh Safikhani, Benjamin Haibe-Kains
:
PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies. Nucleic Acids Res. 46(Database-Issue): D994-D1002 (2018) - 2016
- [j2]Petr Smirnov
, Zhaleh Safikhani, Nehme Hachem
, Dong Wang, Adrian She, Catharina Olsen
, Mark Freeman, Heather Marie Selby, Deena M. A. Gendoo
, Patrick Grossmann, Andrew H. Beck, Hugo J. W. L. Aerts, Mathieu Lupien
, Anna Goldenberg, Benjamin Haibe-Kains
:
PharmacoGx: an R package for analysis of large pharmacogenomic datasets. Bioinform. 32(8): 1244-1246 (2016) - [j1]Zhaleh Safikhani, Nehme Hachem
, Petr Smirnov, Mark Freeman, Anna Goldenberg, Nicolai J. Birkbak
, Andrew H. Beck, Hugo J. W. L. Aerts, John Quackenbush, Benjamin Haibe-Kains
:
Safikhani et al. reply. Nat. 540(7631): E2-E4 (2016)
Conference and Workshop Papers
- 2022
- [c5]Dmitry Itsykson, Artur Riazanov, Petr Smirnov
:
Tight Bounds for Tseitin Formulas. SAT 2022: 6:1-6:21 - 2021
- [c4]Petr Smirnov
, Artem Kovalev
:
Dedicated Payload Stabilization System in a Service Robot for Catering. ICR 2021: 194-204 - 2019
- [c3]Arvind Singh Mer
, Petr Smirnov, Benjamin Haibe-Kains:
Machine Learning for Biomarker Discovery in Cancer Pharmacogenomics Data. BCB 2019: 557 - [c2]Konstantin Krestovnikov
, Ekaterina Cherskikh
, Petr Smirnov
:
Wireless Power Transmission System Based on Coreless Coils for Resource Reallocation Within Robot Group. ICR 2019: 193-203 - [c1]Nikita Pavliuk
, Petr Smirnov
, Artem Kondratkov, Andrey Ronzhin
:
Connecting Gripping Mechanism Based on Iris Diaphragm for Modular Autonomous Robots. ICR 2019: 260-269
Informal and Other Publications
- 2022
- [i4]Xuelin Yang, Louis Abraham, Sejin Kim, Petr Smirnov, Feng Ruan, Benjamin Haibe-Kains, Robert Tibshirani:
FastCPH: Efficient Survival Analysis for Neural Networks. CoRR abs/2208.09793 (2022) - 2019
- [i3]George Adam, Petr Smirnov, Benjamin Haibe-Kains, Anna Goldenberg:
Reducing Adversarial Example Transferability Using Gradient Regularization. CoRR abs/1904.07980 (2019) - [i2]Dmitry Itsykson, Artur Riazanov, Danil Sagunov, Petr Smirnov:
Almost Tight Lower Bounds on Regular Resolution Refutations of Tseitin Formulas for All Constant-Degree Graphs. Electron. Colloquium Comput. Complex. TR19 (2019) - 2018
- [i1]George-Alexandru Adam, Petr Smirnov, Anna Goldenberg, David Duvenaud, Benjamin Haibe-Kains:
Stochastic Combinatorial Ensembles for Defending Against Adversarial Examples. CoRR abs/1808.06645 (2018)
Coauthor Index
![](https://dblp.uni-trier.de/img/cog.dark.24x24.png)
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