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ORCIDPeng Tao 0001
Person information
- affiliation: Southern Methodist University, Department of Chemistry, Dallas, TX, USA
Other persons with the same name
- Peng Tao 0002 — State Grid Hebei Electric Power Co., Ltd, China (and 2 more)
- Peng Tao 0003 — Carnegie Mellon University, Department of ECE, Pittsburgh, PA, USA
- Peng Tao 0004 — Zhejiang University of Technology, College of Computer Science and Technology, China
- Peng Tao 0005 — Chinese Academy of Sciences, Haixi Institutes, Jinjiang, China
- Peng Tao 0006 — Wuhan University, School of Cyber Science and Engineering, China
- Peng Tao 0007 — University of Pittsburgh, Department of Pharmaceutical Sciences, PA, USA
- Peng Tao 0008 — Sincetech (Fujian) Technology Co., Ltd, Quanzhou, China
- Peng Tao 0009
![[0000-0002-6971-5843]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0000-0002-6971-5843")
— University of Chinese Academy of Sciences, Hangzhou Institute for Advanced Study, Key Laboratory of Systems Health Science of Zhejiang Province, China - Peng Tao 0010 — Chongqing University, China
- Peng Tao 0011 — SNBC Ltd, Weihai, China
- Peng Tao 0012 — Jiangxi University of Chinese Medicine, School of Computing, China
- Peng Tao 0013 — Chongqing Normal University, College of Computer and Information Science, China
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2020 – today
- 2024
[j19]Sian Xiao, Mayar Tarek Ibrahim, Gennady M. Verkhivker, Brian D. Zoltowski, Peng Tao:
β-sheets mediate the conformational change and allosteric signal transmission between the AsLOV2 termini. J. Comput. Chem. 45(17): 1493-1504 (2024)- [j18]Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, Sian Xiao, Peng Tao, Gennady Verkhivker:
AlphaFold2-Enabled Atomistic Modeling of Structure, Conformational Ensembles, and Binding Energetics of the SARS-CoV-2 Omicron BA.2.86 Spike Protein with ACE2 Host Receptor and Antibodies: Compensatory Functional Effects of Binding Hotspots in Modulating Mechanisms of Receptor Binding and Immune Escape. J. Chem. Inf. Model. 64(5): 1657-1681 (2024) - 2023
- [j17]Hao Tian, Sian Xiao, Xi Jiang, Peng Tao:
PASSerRank: Prediction of allosteric sites with learning to rank. J. Comput. Chem. 44(28): 2223-2229 (2023) - [j16]Hao Tian, Xi Jiang, Sian Xiao, Hunter La Force, Eric C. Larson, Peng Tao:
LAST: Latent Space-Assisted Adaptive Sampling for Protein Trajectories. J. Chem. Inf. Model. 63(1): 67-75 (2023) - [j15]Steve Agajanian, Mohammed Alshahrani, Fang Bai, Peng Tao, Gennady M. Verkhivker:
Exploring and Learning the Universe of Protein Allostery Using Artificial Intelligence Augmented Biophysical and Computational Approaches. J. Chem. Inf. Model. 63(5): 1413-1428 (2023) - [j14]Sian Xiao, Mohammed Alshahrani, Grace Gupta, Peng Tao, Gennady Verkhivker:
Markov State Models and Perturbation-Based Approaches Reveal Distinct Dynamic Signatures and Hidden Allosteric Pockets in the Emerging SARS-Cov-2 Spike Omicron Variant Complexes with the Host Receptor: The Interplay of Dynamics and Convergent Evolution Modulates Allostery and Functional Mechanisms. J. Chem. Inf. Model. 63(16): 5272-5296 (2023) - [j13]Hao Tian, Sian Xiao, Xi Jiang, Peng Tao:
PASSer: fast and accurate prediction of protein allosteric sites. Nucleic Acids Res. 51(W1): 427-431 (2023) - 2022
- [j12]Fangyun Bai, Kin Ming Puk, Jin Liu, Hongyu Zhou, Peng Tao, Wenyong Zhou, Shouyi Wang:
Sparse group selection and analysis of function-related residue for protein-state recognition. J. Comput. Chem. 43(20): 1342-1354 (2022) - [i1]Hao Tian, Rajas Ketkar, Peng Tao:
Accurate ADMET Prediction with XGBoost. CoRR abs/2204.07532 (2022) - 2021
- [j11]Hao Tian, Xi Jiang, Peng Tao:
PASSer: prediction of allosteric sites server. Mach. Learn. Sci. Technol. 2(3): 35015 (2021) - [j10]Francesco Trozzi, Feng Wang, Gennady Verkhivker, Brian D. Zoltowski, Peng Tao:
Dimeric allostery mechanism of the plant circadian clock photoreceptor ZEITLUPE. PLoS Comput. Biol. 17(7) (2021) - 2020
- [j9]Hao Tian, Peng Tao:
ivis Dimensionality Reduction Framework for Biomacromolecular Simulations. J. Chem. Inf. Model. 60(10): 4569-4581 (2020)
2010 – 2019
- 2019
- [j8]Feng Wang, Hongyu Zhou, Xinlei Wang, Peng Tao:
Dynamical Behavior of β-Lactamases and Penicillin- Binding Proteins in Different Functional States and Its Potential Role in Evolution. Entropy 21(11): 1130 (2019) - [j7]Hamed S. Hayatshahi, Emilio Ahuactzin, Peng Tao, Shouyi Wang, Jin Liu:
Probing Protein Allostery as a Residue-Specific Concept via Residue Response Maps. J. Chem. Inf. Model. 59(11): 4691-4705 (2019) - [j6]Hongyu Zhou, Zheng Dong, Gennady Verkhivker, Brian D. Zoltowski, Peng Tao:
Allosteric mechanism of the circadian protein Vivid resolved through Markov state model and machine learning analysis. PLoS Comput. Biol. 15(2) (2019) - 2018
- [j5]Hongyu Zhou, Zheng Dong, Peng Tao:
Recognition of protein allosteric states and residues: Machine learning approaches. J. Comput. Chem. 39(20): 1481-1490 (2018) - [j4]Arshad Mehmood, Stephanie I. Jones, Peng Tao, Benjamin G. Janesko:
An Orbital-Overlap Complement to Ligand and Binding Site Electrostatic Potential Maps. J. Chem. Inf. Model. 58(9): 1836-1846 (2018) - 2016
- [j3]Robert Kalescky, Hongyu Zhou, Jin Liu, Peng Tao:
Rigid Residue Scan Simulations Systematically Reveal Residue Entropic Roles in Protein Allostery. PLoS Comput. Biol. 12(4) (2016) - 2010
- [j2]Peng Tao, H. Bernhard Schlegel:
A toolkit to assist ONIOM calculations. J. Comput. Chem. 31(12): 2363-2369 (2010)
2000 – 2009
- 2001
- [j1]Peng Tao, Luhua Lai:
Protein ligand docking based on empirical method for binding affinity estimation. J. Comput. Aided Mol. Des. 15(5): 429-446 (2001)
Coauthor Index
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