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Journal Articles
- 2023
[j10]Maria Theiss
, Jean-Karim Hériché, Craig Russell, David Helekal, Alisdair Soppitt, Jonas Ries, Jan Ellenberg, Alvis Brazma, Virginie Uhlmann:
Simulating structurally variable nuclear pore complexes for microscopy. Bioinform. 39(10) (2023)- 2018
- [j9]Yin Cai, M. Julius Hossain, Jean-Karim Hériché, Antonio Z. Politi, Nike Walther, Birgit Koch, Malte Wachsmuth, Bianca Nijmeijer, Moritz Kueblbeck, Marina Martinic-Kavur, Rene Ladurner, Stephanie Alexander, Jan-Michael Peters, Jan Ellenberg:
Experimental and computational framework for a dynamic protein atlas of human cell division. Nat. 561(7723): 411-415 (2018) - 2017
- [j8]Beatriz Serrano-Solano, Antonio Díaz Ramos, Jean-Karim Hériché, Juan A. G. Ranea:
How can functional annotations be derived from profiles of phenotypic annotations? BMC Bioinform. 18(1): 96:1-96:12 (2017) - [j7]Beatriz Serrano-Solano, Antonio Díaz Ramos, Jean-Karim Hériché, Juan A. G. Ranea:
Erratum to: How can functional annotations be derived from profiles of phenotypic annotations? BMC Bioinform. 18(1): 194:1-194:2 (2017) - 2016
- [j6]Simon Jupp, James Malone, Tony Burdett, Jean-Karim Hériché, Eleanor Williams, Jan Ellenberg, Helen E. Parkinson, Gabriella Rustici:
The cellular microscopy phenotype ontology. J. Biomed. Semant. 7: 28 (2016) - 2015
- [j5]Jonathan G. Lees, Jean-Karim Hériché, Ian Morilla, José María Fernández, Priit Adler, Martin Krallinger, Jaak Vilo, Alfonso Valencia, Jan Ellenberg, Juan A. G. Ranea, Christine A. Orengo:
FUN-L: gene prioritization for RNAi screens. Bioinform. 31(12): 2052-2053 (2015) - 2013
- [j4]Grégoire Pau, Thomas Walter, Beate Neumann, Jean-Karim Hériché, Jan Ellenberg, Wolfgang Huber:
Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay. BMC Bioinform. 14: 308 (2013) - 2010
- [j3]Damian Smedley, Paul N. Schofield, Chao-Kung Chen, Vassilis Aidinis, Crysanthi Ainali, Jonathan B. L. Bard, Rudi Balling, Ewan Birney, Andrew Blake, Erik Bongcam-Rudloff, Anthony J. Brookes, Gianni Cesareni, Christina Chandras, Janan T. Eppig, Paul Flicek, Georgios V. Gkoutos, Simon Greenaway, Michael Gruenberger, Jean-Karim Hériché, Andrew Lyall, Ann-Marie Mallon, Dawn Muddyman, Florian Reisinger, Martin Ringwald, Nadia A. Rosenthal, Klaus Schughart, Morris A. Swertz, Gudmundur A. Thorisson, Michael Zouberakis, John M. Hancock:
Finding and sharing: new approaches to registries of databases and services for the biomedical sciences. Database J. Biol. Databases Curation 2010 (2010) - 2008
- [j2]Jue Ruan, Heng Li, Zhongzhong Chen, Avril Coghlan, Lachlan James M. Coin, Yiran Guo, Jean-Karim Hériché, Yafeng Hu, Karsten Kristiansen, Ruiqiang Li, Tao Liu, Alan Moses, Junjie Qin, Søren Vang, Albert J. Vilella, Abel Ureta-Vidal, Lars Bolund, Jun Wang, Richard Durbin:
TreeFam: 2008 Update. Nucleic Acids Res. 36(Database-Issue): 735-740 (2008) - 2006
- [j1]Heng Li, Avril Coghlan, Jue Ruan, Lachlan James M. Coin, Jean-Karim Hériché, Lara Osmotherly, Ruiqiang Li, Tao Liu, Zhang Zhang, Lars Bolund, Gane Ka-Shu Wong, Wei-Mou Zheng, Paramvir Dehal, Jun Wang, Richard Durbin:
TreeFam: a curated database of phylogenetic trees of animal gene families. Nucleic Acids Res. 34(Database-Issue): 572-580 (2006)
Conference and Workshop Papers
- 2023
- [c2]Dirk von Suchodoletz, Yi Sun, Jean-Karim Hériché, Manuel Messner:
Improving the Research Desktop Experience for OpenStack VDI Integrating Hardware Accelerated Rendering and Remote Transport. CoRDI 2023 - 2008
- [c1]Thomas Walter, Michael Held, Beate Neumann, Jean-Karim Hériché, Christian Conrad, Rainer Pepperkok, Jan Ellenberg:
A genome wide RNAI screen by time lapse microscopy in order to identify mitotic genes - computational aspects and challenges. ISBI 2008: 328-331
Informal and Other Publications
- 2021
- [i1]Perrine Paul-Gilloteaux, Sébastien Tosi, Jean-Karim Hériché, Alban Gaignard, Hervé Ménager, Raphaël Marée, Volker Bäcker, Anna H. Klemm, Matús Kalas, Chong Zhang, Kota Miura, Julien Colombelli:
Bioimage analysis workflows: community resources to navigate through a complex ecosystem. F1000Research 10: 320 (2021)
Coauthor Index
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