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Journal Articles
- 2023
[j10]Göknur Giner
, Saima Ikram, Marco J. Herold, Anthony T. Papenfuss:
A systematic review of computational methods for designing efficient guides for CRISPR DNA base editor systems. Briefings Bioinform. 24(4) (2023)- [j9]Md. Abdullah-Al-Kamran Khan, Jian Wu, Yuhan Sun, Alexander D. Barrow, Anthony T. Papenfuss, Stefano Mangiola:
cellsig plug-in enhances CIBERSORTx signature selection for multidataset transcriptomes with sparse multilevel modelling. Bioinform. 39(12) (2023) - 2022
- [j8]Daniel Cameron, Ruining Dong, Anthony T. Papenfuss:
StructuralVariantAnnotation: a R/Bioconductor foundation for a caller-agnostic structural variant software ecosystem. Bioinform. 38(7): 2046-2048 (2022) - 2021
- [j7]Daniel Cameron, Nina Jacobs, Paul Roepman, Peter Priestley, Edwin Cuppen, Anthony T. Papenfuss:
VIRUSBreakend: Viral Integration Recognition Using Single Breakends. Bioinform. 37(19): 3115-3119 (2021) - [j6]Stefano Mangiola, Maria A. Doyle, Anthony T. Papenfuss:
Interfacing Seurat with the R tidy universe. Bioinform. 37(22): 4100-4107 (2021) - 2020
- [j5]Stefano Mangiola, Anthony T. Papenfuss:
tidyHeatmap: an R package for modular heatmap production based on tidy principles. J. Open Source Softw. 5(52): 2472 (2020) - 2017
- [j4]Jan Schröder, Vincent Corbin, Anthony T. Papenfuss:
HYSYS: have you swapped your samples? Bioinform. 33(4): 596-598 (2017) - [j3]Jan Schröder, Adrianto Wirawan, Bertil Schmidt, Anthony T. Papenfuss:
CLOVE: classification of genomic fusions into structural variation events. BMC Bioinform. 18(1): 346 (2017) - [j2]Kenneth D. Doig, Jason Ellul, Andrew Fellowes, Ella R. Thompson, Georgina L. Ryland, Piers Blombery, Anthony T. Papenfuss, Stephen B. Fox:
Canary: an atomic pipeline for clinical amplicon assays. BMC Bioinform. 18(1): 555:1-555:7 (2017) - 2014
- [j1]Jan Schröder, Arthur L. Hsu, Samantha E. Boyle, Geoff MacIntyre, Marek Cmero, Richard W. Tothill, Ricky W. Johnstone, Mark Shackleton, Anthony T. Papenfuss:
Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads. Bioinform. 30(8): 1064-1072 (2014)
Coauthor Index
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