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ORCIDGiovanni Bottegoni
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Journal Articles
- 2018
[j9]Sergio Decherchi
, Giovanni Bottegoni, Andrea Spitaleri, Walter Rocchia, Andrea Cavalli:
BiKi Life Sciences: A New Suite for Molecular Dynamics and Related Methods in Drug Discovery. J. Chem. Inf. Model. 58(2): 219-224 (2018)- [j8]Sergio Decherchi, Giovanni Bottegoni, Andrea Spitaleri, Walter Rocchia, Andrea Cavalli:
Addendum to BiKi Life Sciences: A New Suite for Molecular Dynamics and Related Methods in Drug Discovery. J. Chem. Inf. Model. 58(8): 1721 (2018) - 2015
- [j7]Jarmila Husby, Giovanni Bottegoni, Irina Kufareva, Ruben Abagyan, Andrea Cavalli:
Structure-Based Predictions of Activity Cliffs. J. Chem. Inf. Model. 55(5): 1062-1076 (2015) - 2012
- [j6]Puneet Kacker, Matteo Masetti, Martina Mangold, Giovanni Bottegoni, Andrea Cavalli:
Combining Dyad Protonation and Active Site Plasticity in BACE-1 Structure-Based Drug Design. J. Chem. Inf. Model. 52(5): 1079-1085 (2012) - 2011
- [j5]Angelo D. Favia, Giovanni Bottegoni, Irene Nobeli, Paola Bisignano, Andrea Cavalli:
SERAPhiC: A Benchmark for in Silico Fragment-Based Drug Design. J. Chem. Inf. Model. 51(11): 2882-2896 (2011) - 2010
- [j4]Manuel Rueda, Giovanni Bottegoni, Ruben Abagyan:
Recipes for the Selection of Experimental Protein Conformations for Virtual Screening. J. Chem. Inf. Model. 50(1): 186-193 (2010) - 2009
- [j3]Manuel Rueda, Giovanni Bottegoni, Ruben Abagyan:
Consistent Improvement of Cross-Docking Results Using Binding Site Ensembles Generated with Elastic Network Normal Modes. J. Chem. Inf. Model. 49(3): 716-725 (2009) - 2008
- [j2]Giovanni Bottegoni, Irina Kufareva, Maxim Totrov, Ruben Abagyan:
A new method for ligand docking to flexible receptors by dual alanine scanning and refinement (SCARE). J. Comput. Aided Mol. Des. 22(5): 311-325 (2008) - 2006
- [j1]Giovanni Bottegoni, Andrea Cavalli, Maurizio Recanatini:
A Comparative Study on the Application of Hierarchical-Agglomerative Clustering Approaches to Organize Outputs of Reiterated Docking Runs. J. Chem. Inf. Model. 46(2): 852-862 (2006)
Conference and Workshop Papers
- 2006
- [c1]Giovanni Bottegoni, Walter Rocchia, Maurizio Recanatini, Andrea Cavalli:
AClAP, Autonomous hierarchical agglomerative Cluster Analysis based protocol to partition conformational datasets. ISMB (Supplement of Bioinformatics) 2006: 58-65
Coauthor Index
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