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ORCIDBrian Jiménez-García
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2020 – today
- 2023
[j13]Cyprien Plateau-Holleville
, Simon Guionnière, Benjamin Boyer, Brian Jiménez-García, Guillaume Levieux, Stéphane Mérillou, Maxime Maria, Matthieu Montès:
UDock2: interactive real-time multi-body protein-protein docking software. Bioinform. 39(10) (2023)- [j12]Gilberto Pereira, Brian Jiménez-García, Riccardo Pellarin, Guillaume Launay, Sangwook Wu, Juliette Martin, Paulo Cesar Telles de Souza:
Rational Prediction of PROTAC-Compatible Protein-Protein Interfaces by Molecular Docking. J. Chem. Inf. Model. 63(21): 6823-6833 (2023) - [j11]Brian Jiménez-García, Jorge Roel-Touris, Didier Barradas-Bautista:
The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions. Nucleic Acids Res. 51(W1): 298-304 (2023) - 2021
- [i1]Rodrigo Vargas Honorato, Panagiotis I. Koukos, Brian Jiménez-García, Andrei Tsaregorodtsev, Marco Verlato, Andrea Giachetti, Antonio Rosato, Alexandre M. J. J. Bonvin:
Structural biology in the clouds: The WeNMR-EOSC Ecosystem. CoRR abs/2107.01056 (2021) - 2020
- [j10]Jorge Roel-Touris, Alexandre M. J. J. Bonvin, Brian Jiménez-García:
LightDock goes information-driven. Bioinform. 36(3): 950-952 (2020) - [j9]Miguel Romero-Durana, Brian Jiménez-García, Juan Fernández-Recio:
pyDockEneRes: per-residue decomposition of protein-protein docking energy. Bioinform. 36(7): 2284-2285 (2020) - [j8]Francesco Ambrosetti, Tobias Hegelund Olsen, Pier Paolo Olimpieri, Brian Jiménez-García, Edoardo Milanetti, Paolo Marcatili, Alexandre M. J. J. Bonvin:
proABC-2: PRediction of AntiBody contacts v2 and its application to information-driven docking. Bioinform. 36(20): 5107-5108 (2020)
2010 – 2019
- 2019
- [j7]Justina Jankauskaite, Brian Jiménez-García, Justas Dapkunas, Juan Fernández-Recio, Iain H. Moal:
SKEMPI 2.0: an updated benchmark of changes in protein-protein binding energy, kinetics and thermodynamics upon mutation. Bioinform. 35(3): 462-469 (2019) - [j6]Brian Jiménez-García, Katarina Elez, Panagiotis I. Koukos, Alexandre M. J. J. Bonvin, Anna Vangone:
PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes. Bioinform. 35(22): 4821-4823 (2019) - 2018
- [j5]Brian Jiménez-García, Jorge Roel-Touris, Miguel Romero-Durana, Miquel Vidal, Daniel Jiménez-González, Juan Fernández-Recio:
LightDock: a new multi-scale approach to protein-protein docking. Bioinform. 34(1): 49-55 (2018) - 2017
- [j4]Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio:
IRaPPA: information retrieval based integration of biophysical models for protein assembly selection. Bioinform. 33(12): 1806-1813 (2017) - 2015
- [j3]Iain H. Moal, Brian Jiménez-García, Juan Fernández-Recio:
CCharPPI web server: computational characterization of protein-protein interactions from structure. Bioinform. 31(1): 123-125 (2015) - [j2]Brian Jiménez-García, Carles Pons, Dmitri I. Svergun, Pau Bernadó, Juan Fernández-Recio:
pyDockSAXS: protein-protein complex structure by SAXS and computational docking. Nucleic Acids Res. 43(Webserver-Issue): W356-W361 (2015) - 2013
- [j1]Brian Jiménez-García, Carles Pons, Juan Fernández-Recio:
pyDockWEB: a web server for rigid-body protein-protein docking using electrostatics and desolvation scoring. Bioinform. 29(13): 1698-1699 (2013)
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