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Mattia D'Antonio
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Journal Articles
- 2023
- [j9]Martina Betti, Chiara Maria Salzano
, Alice Massacci, Mattia D'Antonio, Isabella Grassucci
, Benedetta Marcozzi, Marco Canfora
, Elisa Melucci, Simonetta Buglioni
, Beatrice Casini
, Enzo Gallo
, Edoardo Pescarmona, Gennaro Ciliberto
, Matteo Pallocca
:
Development of a somatic variant registry in a National Cancer Center: towards Molecular Real World Data preparedness. J. Biomed. Informatics 142: 104394 (2023) - 2017
- [j8]Bruno Fosso
, Monica Santamaria
, Mattia D'Antonio, Domenica Lovero
, Giacomo Corrado
, Enrico Vizza
, N. Pássaro, Anna Rosa Garbuglia, M. R. Capobianchi, Marco Crescenzi
, Gabriel Valiente, Graziano Pesole:
MetaShot: an accurate workflow for taxon classification of host-associated microbiome from shotgun metagenomic data. Bioinform. 33(11): 1730-1732 (2017) - 2013
- [j7]Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Berardino Elmi, Matteo Pallocca
, Nico Sanna
, Ernesto Picardi
, Graziano Pesole
, Tiziana Castrignanò:
WEP: a high-performance analysis pipeline for whole-exome data. BMC Bioinform. 14(S-7): S11 (2013) - [j6]Matteo Giulietti
, Francesco Piva
, Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Tiziana Castrignanò, Anna Maria D'Erchia
, Ernesto Picardi
, Federico Zambelli
, Giovanni Principato
, Giulio Pavesi
, Graziano Pesole
:
SpliceAid-F: a database of human splicing factors and their RNA-binding sites. Nucleic Acids Res. 41(Database-Issue): 125-131 (2013) - 2012
- [j5]Paolo D'Onorio De Meo, Mattia D'Antonio, Francesca Griggio, Renato Lupi, Massimiliano Borsani
, Giulio Pavesi
, Tiziana Castrignanò, Graziano Pesole
, Carmela Gissi
:
MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa. Nucleic Acids Res. 40(Database-Issue): 1168-1172 (2012) - 2011
- [j4]Ernesto Picardi
, Mattia D'Antonio, Danilo Carrabino, Tiziana Castrignanò, Graziano Pesole
:
ExpEdit: a webserver to explore human RNA editing in RNA-Seq experiments. Bioinform. 27(9): 1311-1312 (2011) - [j3]Pier Luigi Martelli
, Mattia D'Antonio, Paola Bonizzoni
, Tiziana Castrignanò, Anna Maria D'Erchia
, Paolo D'Onorio De Meo, Piero Fariselli
, Michele Finelli, Flavio Licciulli
, Marina Mangiulli, Flavio Mignone, Giulio Pavesi
, Ernesto Picardi
, Raffaella Rizzi
, Ivan Rossi
, Alessio Valletti
, Andrea Zauli, Federico Zambelli
, Rita Casadio
, Graziano Pesole
:
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Res. 39(Database-Issue): 80-85 (2011) - 2009
- [j2]Francesco Chiani, Camilla Iannone, Rodolfo Negri, Daniele Paoletti, Mattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò:
Radiation Genes: a database devoted to microarrays screenings revealing transcriptome alterations induced by ionizing radiation in mammalian cells. Database J. Biol. Databases Curation 2009 (2009) - 2008
- [j1]Tiziana Castrignanò, Mattia D'Antonio, Anna Anselmo
, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia
, Flavio Licciulli
, Marina Mangiulli, Flavio Mignone, Giulio Pavesi
, Ernesto Picardi
, Alberto Riva
, Raffaella Rizzi
, Paola Bonizzoni
, Graziano Pesole
:
ASPicDB: A database resource for alternative splicing analysis. Bioinform. 24(10): 1300-1304 (2008)
Conference and Workshop Papers
- 2017
- [c4]Mattia D'Antonio, Paolo D'Onorio De Meo, Claudio Cacciari, Giuseppe Fiameni:
Characterization of Genomic Data Using Graph Databases. PARCO 2017: 423-432 - [c3]Simona Caraceni, Michele Carpenè, Mattia D'Antonio, Giuseppe Fiameni, Antonella Guidazzoli, Silvano Imboden, Maria Chiara Liguori
, Margherita Montanari, Giuseppe Trotta, Gabriella Scipione
, Davy Hanegreefs:
I-media-cities, a searchable platform on moving images with automatic and manual annotations. VSMM 2017: 1-8 - 2014
- [c2]Mattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò, Giovanni Erbacci, Matteo Pallocca
, Graziano Pesole
:
ODESSA: A high performance analysis pipeline for Ultra Deep targeted Exome Sequencing data. HPCS 2014: 608-615 - 2008
- [c1]Paolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo
, Sabino Liuni, Flavio Mignone, Graziano Pesole
, Nicola Ancona
:
HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers. CCGRID 2008: 747-752
Coauthor Index
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