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2020 – today
- 2024
[c18]Marketa Nykrynova
, Matej Bezdicek, Martina Lengerova, Helena Vitkova:
Exploring DNA Methylation Patterns in the Core Genome of Klebsiella pneumoniae. IWBBIO (2) 2024: 140-152- [c17]Helena Vitkova, Marketa Nykrynova, Matej Bezdicek, Martina Lengerova:
Unveiling Diversity: Classification of Klebsiella Pneumoniae Plasmids from Long-read Assemblies. IWBBIO (2) 2024: 314-328 - 2023
- [j3]Robin Jugas, Helena Vitkova:
ProcaryaSV: structural variation detection pipeline for bacterial genomes using short-read sequencing. BMC Bioinform. 24(1): 233 (2023) - [c16]Marketa Nykrynova, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Bacterial phenotype prediction based on methylation site profiles. CIBCB 2023: 1-6 - 2022
- [c15]Vojtech Barton, Helena Skutkova:
Data Transformation for Clustering Utilization for Feature Detection in Mass Spectrometry. IWBBIO (2) 2022: 288-299 - 2021
- [c14]Vojtech Barton, Markéta Nykrýnová, Helena Skutková:
MANASIG: Python Package to Manipulate Nanopore Signals From Sequencing Files. BIBM 2021: 1941-1947 - [c13]Marketa Nykrynova, Vojtech Barton, Martin Vítek, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Raw nanopore squiggle alignment for bacterial typing distinction enhancement. BIBM 2021: 1969-1974 - 2020
- [c12]Vojtech Barton, Markéta Nykrýnová, Helena Skutková:
Watershed Segmentation for Peak Picking in Mass Spectrometry Data. IWBBIO 2020: 494-502 - [c11]Marketa Nykrynova, Vojtech Barton, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Detection of Highly Variable Genome Fragments in Unmapped Reads of Escherichia coli Genomes. IWBBIO 2020: 569-578
2010 – 2019
- 2019
- [c10]Robin Jugas, Martin Vítek, Denisa Maderankova, Helena Skutkova:
Signal Processing Based CNV Detection in Bacterial Genomes. IWBBIO (1) 2019: 93-102 - [c9]Marketa Nykrynova, Denisa Maderankova, Vojtech Barton, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Entropy-Based Detection of Genetic Markers for Bacteria Genotyping. IWBBIO (2) 2019: 177-188 - [c8]Vojtech Barton, Marketa Nykrynova, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Clustering of Klebsiella Strains Based on Variability in Sequencing Data. IWBBIO (2) 2019: 189-199 - 2018
- [c7]Marketa Nykrynova, Denisa Maderankova, Matej Bezdicek, Martina Lengerova, Helena Skutkova:
Bioinformatic Tools for Genotyping of Klebsiella pneumoniae Isolates. ITIB 2018: 419-428 - [c6]Robin Jugas, Martin Vítek, Karel Sedlár, Helena Skutkova:
Cross-correlation based detection of contigs overlaps. MIPRO 2018: 155-158 - 2017
- [c5]Robin Jugas, Karel Sedlár, Martin Vítek, Helena Skutkova:
Overlap Detection for a Genome Assembly Based on Genomic Signal Processing. CBMS 2017: 300-305 - [c4]Denisa Maderankova, Karel Sedlár, Martin Vítek, Helena Skutkova:
The identification of replication origin in bacterial genomes by cumulated phase signal. CIBCB 2017: 1-5 - 2016
- [j2]Karel Sedlár, Helena Skutkova, Martin Vítek, Ivo Provazník:
Set of rules for genomic signal downsampling. Comput. Biol. Medicine 69: 308-314 (2016) - 2015
- [c3]Karel Sedlár, Helena Skutkova, Petra Videnska, Ivan Rychlik, Ivo Provazník:
Bipartite graphs for metagenomic data analysis and visualization. BIBM 2015: 1123-1128 - 2013
- [j1]Helena Skutkova, Martin Vítek, Petr Babula, René Kizek, Ivo Provazník:
Classification of genomic signals using dynamic time warping. BMC Bioinform. 14(S-10): S1 (2013) - 2012
- [c2]Ivo Provazník, Vladimira Kubicova, Helena Skutkova, Jiri Nedved, Ewaryst Tkacz, Petr Babula, René Kizek:
Detection of short exons in DNA sequences using complex wavelet transform of structural features. GENSiPS 2012: 107-110 - 2011
- [c1]Helena Skutkova, Ivo Provazník, René Kizek:
Influence of sample variance on the phylogenetic reconstruction of protein sequences. ISABEL 2011: 43:1-43:5
Coauthor Index
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