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Richard G. Posner
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2020 – today
- 2022
- [j8]Jacob Neumann, Yen Ting Lin
, Abhishek Mallela
, Ely F. Miller
, Joshua Colvin, Abell T. Duprat, Ye Chen, William S. Hlavacek
, Richard G. Posner:
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit. Bioinform. 38(6): 1770-1772 (2022)
2010 – 2019
- 2019
- [j7]Keesha E. Erickson, Oleksii S. Rukhlenko
, MD Shahinuzzaman
, Kalina P. Slavkova
, Yen Ting Lin
, Ryan Suderman
, Edward C. Stites, Marian Anghel, Richard G. Posner
, Dipak Barua
, Boris N. Kholodenko
, William S. Hlavacek
:
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor. PLoS Comput. Biol. 15(1) (2019) - 2016
- [j6]Brandon R. Thomas, Lily A. Chylek, Joshua Colvin, Suman Sirimulla, Andrew H. A. Clayton
, William S. Hlavacek
, Richard G. Posner:
BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments. Bioinform. 32(5): 798-800 (2016) - [j5]Mathew R. Koebel, Grant Schmadeke, Richard G. Posner, Suman Sirimulla:
AutoDock VinaXB: implementation of XBSF, new empirical halogen bond scoring function, into AutoDock Vina. J. Cheminformatics 8(1): 27:1-27:8 (2016) - 2012
- [j4]Matthew S. Creamer, Edward C. Stites, Meraj Aziz, James A. Cahill, Chin Wee Tan
, Michael E. Berens, Haiyong Han, Kimberly J. Bussey
, Daniel D. Von Hoff, William S. Hlavacek
, Richard G. Posner:
Specification, annotation, visualization and simulation of a large rule-based model for ERBB receptor signaling. BMC Syst. Biol. 6: 107 (2012) - 2010
- [j3]Joshua Colvin, Michael I. Monine, Ryan N. Gutenkunst, William S. Hlavacek
, Daniel D. Von Hoff, Richard G. Posner:
RuleMonkey: software for stochastic simulation of rule-based models. BMC Bioinform. 11: 404 (2010)
2000 – 2009
- 2009
- [j2]Joshua Colvin, Michael I. Monine, James R. Faeder
, William S. Hlavacek
, Daniel D. Von Hoff, Richard G. Posner:
Simulation of large-scale rule-based models. Bioinform. 25(7): 910-917 (2009) - [j1]Bin Hu
, G. Matthew Fricke, James R. Faeder
, Richard G. Posner, William S. Hlavacek
:
GetBonNie for building, analyzing and sharing rule-based models. Bioinform. 25(11): 1457-1460 (2009)
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