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Vincenzo Manca
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Books and Theses
- 2023
- [b1]Vincenzo Manca, Vincenzo Bonnici:
Infogenomics - The Informational Analysis of Genomes. Springer 2023, ISBN 978-3-031-44500-2, pp. 1-281
Journal Articles
- 2024
- [j47]Vincenzo Manca
:
The Archimedean Origin of Modern Positional Number Systems. Algorithms 17(1): 11 (2024) - [j46]Vincenzo Manca
:
Agile Logical Semantics for Natural Languages. Inf. 15(1): 64 (2024) - [j45]Vincenzo Manca
:
Artificial Neural Network Learning, Attention, and Memory. Inf. 15(7): 387 (2024) - 2021
- [j44]Giuditta Franco
, Vincenzo Manca
, Marco Andreolli
, Silvia Lampis:
Emergence of random selections in evolution of biological populations. Theor. Comput. Sci. 862: 130-143 (2021) - [j43]Vincenzo Bonnici
, Giuditta Franco
, Vincenzo Manca
:
Spectral concepts in genome informational analysis. Theor. Comput. Sci. 894: 23-30 (2021) - [j42]Vincenzo Manca
, Giuseppe Scollo:
Explaining DNA structure. Theor. Comput. Sci. 894: 152-171 (2021) - 2019
- [j41]Vincenzo Manca
:
Metabolic computing. J. Membr. Comput. 1(3): 223-232 (2019) - [j40]Vincenzo Manca
:
From biopolymer duplication to membrane duplication and beyond. J. Membr. Comput. 1(4): 292-303 (2019) - 2018
- [j39]Vincenzo Bonnici
, Vincenzo Manca
:
An Informational Test for Random Finite Strings. Entropy 20(12): 934 (2018) - 2017
- [j38]Vincenzo Manca
:
The principles of informational genomics. Theor. Comput. Sci. 701: 190-202 (2017) - 2015
- [j37]Alberto Castellini, Daniele Paltrinieri, Vincenzo Manca
:
MP-GeneticSynth: inferring biological network regulations from time series. Bioinform. 31(5): 785-787 (2015) - [j36]Luca Marchetti
, Vincenzo Manca
:
MpTheory Java library: a multi-platform Java library for systems biology based on the Metabolic P theory. Bioinform. 31(8): 1328-1330 (2015) - [j35]Alberto Castellini, Vincenzo Manca
, Mauro Zucchelli
:
An evolutionary procedure for inferring MP systems regulation functions of biological networks. Nat. Comput. 14(3): 375-391 (2015) - 2014
- [j34]Aliccia Bollig-Fischer
, Luca Marchetti
, Cristina Mitrea, Jiusheng Wu, Adéle Kruger, Vincenzo Manca
, Sorin Draghici
:
Modeling time-dependent transcription effects of HER2 oncogene and discovery of a role for E2F2 in breast cancer cell-matrix adhesion. Bioinform. 30(21): 3036-3043 (2014) - [j33]Vincenzo Manca
, Giovanni Pardini:
Morphogenesis through moving membranes. Nat. Comput. 13(3): 403-419 (2014) - 2013
- [j32]Vincenzo Manca
, Luca Marchetti
:
An algebraic formulation of inverse problems in MP dynamics. Int. J. Comput. Math. 90(4): 845-856 (2013) - 2012
- [j31]Vincenzo Manca
, Luca Marchetti
:
Solving dynamical inverse problems by means of Metabolic P systems. Biosyst. 109(1): 78-86 (2012) - 2011
- [j30]Vincenzo Manca
, Luca Marchetti
:
Log-Gain stoichiometric Stepwise Regression for MP Systems. Int. J. Found. Comput. Sci. 22(1): 97-106 (2011) - [j29]Vincenzo Manca
, Luca Marchetti, Roberto Pagliarini:
MP Modelling of Glucose-Insulin Interactions in the Intravenous Glucose Tolerance Test. Int. J. Nat. Comput. Res. 2(3): 13-24 (2011) - [j28]Vincenzo Manca:
Algorithmic Models of Biochemical Dynamics: MP Grammars Synthetizing Complex Oscillators. Int. J. Nanotechnol. Mol. Comput. 3(4): 24-37 (2011) - [j27]Giuditta Franco
, Vincenzo Manca
:
Algorithmic applications of XPCR. Nat. Comput. 10(2): 805-819 (2011) - 2010
- [j26]Vincenzo Manca
, Luca Marchetti
:
Metabolic approximation of real periodical functions. J. Log. Algebraic Methods Program. 79(6): 363-373 (2010) - [j25]Alberto Castellini, Giuditta Franco
, Vincenzo Manca
:
Hybrid Functional Petri Nets as MP systems. Nat. Comput. 9(1): 61-81 (2010) - [j24]Marian Gheorghe
, Vincenzo Manca
, Francisco José Romero-Campero
:
Deterministic and stochastic P systems for modelling cellular processes. Nat. Comput. 9(2): 457-473 (2010) - [j23]Vincenzo Manca
:
Metabolic P systems. Scholarpedia 5(3): 9273 (2010) - 2009
- [j22]Roberto Pagliarini, Giuditta Franco
, Vincenzo Manca:
An Algorithm for Initial Fluxes of Metabolic P Systems. Int. J. Comput. Commun. Control 4(3): 263-272 (2009) - [j21]Vincenzo Manca
, Roberto Pagliarini, Simone Zorzan:
A photosynthetic process modelled by a metabolic P system. Nat. Comput. 8(4): 847-864 (2009) - 2008
- [j20]Vincenzo Manca
, Luca Bianco
:
Biological networks in metabolic P systems. Biosyst. 91(3): 489-498 (2008) - [j19]Federico Fontana
, Vincenzo Manca
:
Predator-prey dynamics in P systems ruled by metabolic algorithm. Biosyst. 91(3): 545-557 (2008) - [j18]Giuseppe Scollo
, Giuditta Franco
, Vincenzo Manca
:
Relational state transition dynamics. J. Log. Algebraic Methods Program. 76(1): 130-144 (2008) - [j17]Vincenzo Manca
:
The metabolic algorithm for P systems: Principles and applications. Theor. Comput. Sci. 404(1-2): 142-155 (2008) - 2007
- [j16]Federico Fontana
, Vincenzo Manca
:
Discrete solutions to differential equations by metabolic P systems. Theor. Comput. Sci. 372(2-3): 165-182 (2007) - 2006
- [j15]Luca Bianco
, Vincenzo Manca
:
Symbolic generation and representation of complex oscillations. Int. J. Comput. Math. 83(7): 549-568 (2006) - [j14]Luca Bianco
, Federico Fontana
, Vincenzo Manca
:
P systems with reaction maps. Int. J. Found. Comput. Sci. 17(1): 27-48 (2006) - [j13]Paolo Bottoni
, Anna Labella, Vincenzo Manca
, Victor Mitrana:
Superposition Based on Watson-Crick-Like Complementarity. Theory Comput. Syst. 39(4): 503-524 (2006) - [j12]Henning Bordihn, Henning Fernau
, Markus Holzer
, Vincenzo Manca
, Carlos Martín-Vide:
Iterated sequential transducers as language generating devices. Theor. Comput. Sci. 369(1-3): 67-81 (2006) - 2005
- [j11]Francesco Bernardini, Marian Gheorghe, Vincenzo Manca:
On P Systems and Almost Periodicity. Fundam. Informaticae 64(1-4): 29-42 (2005) - [j10]Vincenzo Manca:
On the Logic and Geometry of Bilinear Forms. Fundam. Informaticae 64(1-4): 261-273 (2005) - [j9]Giuditta Franco
, Vincenzo Manca
:
An algorithmic analysis of DNA structure. Soft Comput. 9(10): 761-768 (2005) - 2002
- [j8]Vincenzo Manca:
DNA and Membrane Algorithms for SAT. Fundam. Informaticae 49(1-3): 205-221 (2002) - 2001
- [j7]Vincenzo Manca, Carlos Martín-Vide, Gheorghe Paun:
On the Power of P Systems with Replicated Rewriting. J. Autom. Lang. Comb. 6(3): 359-374 (2001) - [j6]Vincenzo Manca
:
Logical string rewriting. Theor. Comput. Sci. 264(1): 25-51 (2001) - 1998
- [j5]Vincenzo Manca, Gheorghe Paun:
Arithmetically Controlled H Systems. Comput. Sci. J. Moldova 6(2): 106-118 (1998) - 1992
- [j4]Vincenzo Manca
, Antonino Salibra
:
Soundness and Completeness of the Birkhoff Equational Calculus for Many-Sorted Algebras with Possibly Empty Carrier Sets. Theor. Comput. Sci. 94(1): 101-124 (1992) - 1990
- [j3]Vincenzo Manca
, Antonino Salibra
, Giuseppe Scollo
:
Equational Type Logic. Theor. Comput. Sci. 77(1&2): 131-159 (1990) - 1984
- [j2]Vincenzo Manca
, Antonino Salibra
:
First-order theories as many-sorted algebras. Notre Dame J. Formal Log. 25(1): 86-94 (1984) - 1981
- [j1]Vincenzo Manca:
Computational formalism: abstract combinatory view-point and related first order logical framework. Fundam. Informaticae 4(1): 3-18 (1981)
Conference and Workshop Papers
- 2018
- [c51]Vincenzo Manca
:
A Note on the Entropy of Computation. Enjoying Natural Computing 2018: 192-203 - 2015
- [c50]Vincenzo Manca
:
A Brief Philosophical Note on Information. BIRS-IMLKE 2015: 146-149 - [c49]Vincenzo Manca
:
Information Theory in Genome Analysis. Int. Conf. on Membrane Computing 2015: 3-18 - [c48]Ricardo Henrique Gracini Guiraldelli, Vincenzo Manca
:
Automatic Translation of MP ^+ V Systems to Register Machines. Int. Conf. on Membrane Computing 2015: 185-199 - 2014
- [c47]Luca Marchetti
, Vincenzo Manca
, Ivan Zelinka:
On the inference of deterministic chaos: Evolutionary algorithm and metabolic P system approaches. IEEE Congress on Evolutionary Computation 2014: 1483-1489 - [c46]Alberto Castellini, Giuditta Franco
, Vincenzo Manca
, Riccardo Ortolani, Antonio Vella:
Towards an MP Model for B Lymphocytes Maturation. UCNC 2014: 80-92 - 2012
- [c45]Vincenzo Manca, Luca Marchetti:
Application of the MP Theory to Systems Biology. BIOSIGNALS 2012: 303-308 - [c44]Alberto Castellini, Vincenzo Manca
, Mauro Zucchelli
, Mirko Busato:
A genetic approach for synthesizing metabolic models from time series. GECCO (Companion) 2012: 1415-1416 - [c43]Alberto Castellini, Vincenzo Manca
, Mauro Zucchelli
:
Towards an Evolutionary Procedure for Reverse-Engineering Biological Networks. ICARIS 2012: 271-285 - [c42]Vincenzo Manca
:
An Outline of MP Modeling Framework. Int. Conf. on Membrane Computing 2012: 47-55 - [c41]Roberto Pagliarini, Oana Agrigoroaiei, Gabriel Ciobanu
, Vincenzo Manca
:
An Analysis of Correlative and Static Causality in P Systems. Int. Conf. on Membrane Computing 2012: 323-341 - 2011
- [c40]Vincenzo Manca
:
A Recurrent Enumeration of Free Hypermultisets. Computation, Cooperation, and Life 2011: 16-23 - [c39]Rosario Lombardo
, Vincenzo Manca
:
Arithmetical Metabolic P Systems. IWINAC (1) 2011: 284-294 - [c38]Vincenzo Manca
, Rosario Lombardo
:
Computing with Multi-membranes. Int. Conf. on Membrane Computing 2011: 282-299 - [c37]Luca Marchetti
, Vincenzo Manca
:
A Methodology Based on MP Theory for Gene Expression Analysis. Int. Conf. on Membrane Computing 2011: 300-313 - 2010
- [c36]Vincenzo Manca, Luca Marchetti:
Goldbeter's Mitotic Oscillator Entirely Modeled by MP Systems. Int. Conf. on Membrane Computing 2010: 273-284 - 2009
- [c35]Vincenzo Manca
:
Log-gain Principles for Metabolic P Systems. Algorithmic Bioprocesses 2009: 585-605 - [c34]Vincenzo Manca
, Luca Marchetti
:
XML Representation of Metabolic P Systems. IEEE Congress on Evolutionary Computation 2009: 3103-3110 - [c33]Alberto Castellini, Vincenzo Manca
:
Learning regulation functions of metabolic systems by artificial neural networks. GECCO 2009: 193-200 - [c32]Vincenzo Manca
, María Dolores Jiménez-López
:
Recombination Patterns for Natural Syntax. IWINAC (1) 2009: 315-324 - [c31]Vincenzo Manca
:
From P to MP Systems. Workshop on Membrane Computing 2009: 74-94 - [c30]Alberto Castellini, Vincenzo Manca
, Yasuhiro Suzuki
:
Metabolic P System Flux Regulation by Artificial Neural Networks. Workshop on Membrane Computing 2009: 196-209 - [c29]Giuditta Franco
, Vincenzo Manca
, Roberto Pagliarini:
Regulation and Covering Problems in MP Systems. Workshop on Membrane Computing 2009: 242-251 - 2008
- [c28]Alberto Castellini, Vincenzo Manca
:
MetaPlab: A Computational Framework for Metabolic P Systems. Workshop on Membrane Computing 2008: 157-168 - [c27]Vincenzo Manca
:
Enumerating Membrane Structures. Workshop on Membrane Computing 2008: 292-298 - [c26]Vincenzo Manca
, Roberto Pagliarini, Simone Zorzan:
Toward an MP Model of Non-Photochemical Quenching. Workshop on Membrane Computing 2008: 299-310 - 2007
- [c25]Luca Bianco
, Vincenzo Manca
, Luca Marchetti
, Michele Petterlini:
Psim: a simulator for biomolecular dynamics based on P systems. IEEE Congress on Evolutionary Computation 2007: 883-887 - [c24]Vincenzo Manca
:
Discrete Simulations of Biochemical Dynamics. DNA 2007: 231-235 - [c23]Alberto Castellini, Giuditta Franco
, Vincenzo Manca
:
Toward a Representation of Hybrid Functional Petri Nets by MP Systems. IWNC 2007: 28-37 - 2006
- [c22]Giuseppe Scollo, Giuditta Franco
, Vincenzo Manca:
A Relational View of Recurrence and Attractors in State Transition Dynamics. RelMiCS 2006: 358-372 - [c21]Vincenzo Manca
:
MP Systems Approaches to Biochemical Dynamics: Biological Rhythms and Oscillations. Workshop on Membrane Computing 2006: 86-99 - [c20]Giuditta Franco
, Pietro Hiram Guzzi, Vincenzo Manca
, Tommaso Mazza
:
Mitotic Oscillators as MP Graphs. Workshop on Membrane Computing 2006: 382-394 - 2005
- [c19]Federico Fontana
, Luca Bianco
, Vincenzo Manca
:
A symbolic approach to the simulation of biochemical models: application to circadian rhythms. CSB Workshops 2005: 168-169 - [c18]Giuditta Franco
, Vincenzo Manca
, Cinzia Giagulli, Carlo Laudanna:
DNA Recombination by XPCR. DNA 2005: 55-66 - [c17]Luca Bianco, Federico Fontana
, Vincenzo Manca:
Reaction-Driven Membrane Systems. ICNC (2) 2005: 1155-1158 - [c16]Luca Bianco
, Vincenzo Manca
:
Encoding-Decoding Transitional Systems for Classes of P Systems. Workshop on Membrane Computing 2005: 134-143 - [c15]Federico Fontana
, Luca Bianco
, Vincenzo Manca
:
P Systems and the Modeling of Biochemical Oscillations. Workshop on Membrane Computing 2005: 199-208 - [c14]Luca Bianco
, Vincenzo Manca
, Simone Zorzan:
Symbolic Representations of Biological Oscillations. SYNASC 2005: 407-414 - 2004
- [c13]Vincenzo Manca:
A Proof of Regularity for Finite Splicing. Aspects of Molecular Computing 2004: 309-317 - [c12]Giuditta Franco
, Cinzia Giagulli, Carlo Laudanna, Vincenzo Manca:
DNA Extraction by XPCR. DNA 2004: 104-112 - [c11]Vincenzo Manca, Luca Bianco, Federico Fontana
:
Evolution and Oscillation in P Systems: Applications to Biological Phenomena. Workshop on Membrane Computing 2004: 63-84 - 2003
- [c10]Giuditta Franco
, Vincenzo Manca:
A Membrane System for the Leukocyte Selective Recruitment. Workshop on Membrane Computing 2003: 181-190 - 2002
- [c9]Francesco Bernardini, Vincenzo Manca:
P Systems with Boundary Rules. WMC-CdeA 2002: 107-118 - 2001
- [c8]Vincenzo Manca:
On the Generative Power of Iterated Transductions. Words, Semigroups, and Transductions 2001: 315-327 - [c7]Vincenzo Manca:
On some forms of splicing. Where Mathematics, Computer Science, Linguistics and Biology Meet 2001: 387-398 - [c6]Vincenzo Manca
, Claudio Zandron:
A Clause String DNA Algorithm for SAT. DNA 2001: 172-181 - 1999
- [c5]Vincenzo Manca, Carlos Martín-Vide, Gheorghe Paun:
Iterated GSM Mappings: A Collapsing Hierarchy. Jewels are Forever 1999: 182-193 - [c4]Vincenzo Manca, Domenico Marco Martina:
From String Rewriting to Logical Metabolic Systems. Grammatical Models of Multi-Agent Systems 1999: 297-315 - 1990
- [c3]Vincenzo Manca
, Antonino Salibra
:
Equational Calculi for Many-Sorted Algebras with Empty Carrier Sets. MFCS 1990: 423-429 - 1989
- [c2]Vincenzo Manca
, Antonino Salibra
, Giuseppe Scollo:
On the Nature of TELLUS (a Typed Equational Logic Look over Uniform Specification). MFCS 1989: 338-349 - 1986
- [c1]Vincenzo Manca:
Specification of Abstract Data Types with Experiments. ADT 1986
Parts in Books or Collections
- 2018
- [p5]Giuditta Franco
, Vincenzo Manca
:
Decoding Genomic Information. Computational Matter 2018: 129-149 - 2016
- [p4]Vincenzo Manca
:
Grammars for Discrete Dynamics. Machine Learning for Health Informatics 2016: 37-58 - 2007
- [p3]Alberto Castellini, Vincenzo Manca
, Luca Marchetti
:
MP Systems and Hybrid Petri Nets. NICSO 2007: 53-62 - 2006
- [p2]Luca Bianco, Federico Fontana, Giuditta Franco, Vincenzo Manca:
P Systems for Biological Dynamics. Applications of Membrane Computing 2006: 83-128 - 2000
- [p1]Vincenzo Manca:
Splicing Normalization and Regularity. Finite Versus Infinite 2000: 199-215
Informal and Other Publications
- 2021
- [i4]Vincenzo Bonnici, Giuditta Franco, Vincenzo Manca:
Spectral concepts in genome informational analysis. CoRR abs/2106.15351 (2021) - 2020
- [i3]Vincenzo Bonnici, Giuditta Franco, Vincenzo Manca:
A word recurrence based algorithm to extract genomic dictionaries. CoRR abs/2009.10449 (2020) - 2015
- [i2]Ricardo Henrique Gracini Guiraldelli, Vincenzo Manca:
The Computational Universality of Metabolic Computing. CoRR abs/1505.02420 (2015) - 2011
- [i1]Giuditta Franco, Vincenzo Manca:
On Synthesizing Replicating Metabolic Systems. ERCIM News 2011(85): 21 (2011)
Coauthor Index
![](https://dblp.uni-trier.de/img/cog.dark.24x24.png)
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