
Anita Burgun-Parenthoine
Anita Burgun
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2020 – today
- 2020
- [c75]Antoine Neuraz, Bastien Rance, Nicolas Garcelon
, Leonardo Campillos Llanos, Anita Burgun, Sophie Rosset:
The Impact of Specialized Corpora for Word Embeddings in Natural Langage Understanding. MIE 2020: 432-436 - [i4]Ivan Lerner, Jordan Jouffroy, Anita Burgun, Antoine Neuraz:
Learning the grammar of prescription: recurrent neural network grammars for medication information extraction in clinical texts. CoRR abs/2004.11622 (2020)
2010 – 2019
- 2019
- [j37]Vincent Looten
, Liliane Kong Win Chang, Antoine Neuraz, Marie-Anne Landau-Loriot, Benoit Vedie, Jean-Louis Paul, Laëtitia Mauge, Nadia Rivet, Angela Bonifati, Gilles Chatellier, Anita Burgun, Bastien Rance
:
What can millions of laboratory test results tell us about the temporal aspect of data quality? Study of data spanning 17 years in a clinical data warehouse. Comput. Methods Programs Biomed. 181 (2019) - [j36]Xiaoyi Chen
, Nicolas Garcelon
, Antoine Neuraz
, Katy Billot, Marc Lelarge, Thomas Bonald, Hugo Garcia, Yoann Martin, Vincent Benoit, Marc Vincent, Hassan Faour, Maxime Douillet, Stanislas Lyonnet, Sophie Saunier, Anita Burgun:
Phenotypic similarity for rare disease: Ciliopathy diagnoses and subtyping. J. Biomed. Informatics 100 (2019) - [c74]William Digan, Maxime Wack, Vincent Looten, Antoine Neuraz, Anita Burgun, Bastien Rance:
Evaluating the Impact of Text Duplications on a Corpus of More than 600, 000 Clinical Narratives in a French Hospital. MedInfo 2019: 103-107 - [c73]Antoine Neuraz, Vincent Looten, Bastien Rance, Nicolas Daniel, Nicolas Garcelon, Leonardo Campillos Llanos, Anita Burgun, Sophie Rosset:
Do You Need Embeddings Trained on a Massive Specialized Corpus for Your Clinical Natural Language Processing Task? MedInfo 2019: 1558-1559 - 2018
- [j35]Nicolas Garcelon
, Antoine Neuraz
, Rémi Salomon, Hassan Faour, Vincent Benoit, Arthur Delapalme, Arnold Munnich, Anita Burgun, Bastien Rance
:
A clinician friendly data warehouse oriented toward narrative reports: Dr. Warehouse. J. Biomed. Informatics 80: 52-63 (2018) - [c72]Rodolphe Jantzen
, Bastien Rance, Sandrine Katsahian, Anita Burgun, Vincent Looten:
The Need of an Open Data Quality Policy: The Case of the "Transparency - Health" Database in the Prevention of Conflict of Interest. MIE 2018: 611-615 - [i3]Simon Bussy, Raphaël Veil, Vincent Looten, Anita Burgun, Stéphane Gaïffas, Agathe Guilloux, Brigitte Ranque, Anne-Sophie Jannot:
Comparison of methods for early-readmission prediction in a high-dimensional heterogeneous covariates and time-to-event outcome framework. CoRR abs/1807.09821 (2018) - [i2]Antoine Neuraz, Leonardo Campillos Llanos, Anita Burgun, Sophie Rosset:
Natural language understanding for task oriented dialog in the biomedical domain in a low resources context. CoRR abs/1811.09417 (2018) - 2017
- [j34]William Dunn Jr, Anita Burgun
, Marie-Odile Krebs, Bastien Rance:
Exploring and visualizing multidimensional data in translational research platforms. Briefings Bioinform. 18(6): 1044-1056 (2017) - [j33]Adrien Barton, Jean-François Ethier
, Régis Duvauferrier, Anita Burgun
:
An ontological analysis of medical Bayesian indicators of performance. J. Biomed. Semant. 8(1): 1:1-1:13 (2017) - [j32]Anne-Sophie Jannot
, Eric Zapletal, Paul Avillach, Marie-France Mamzer
, Anita Burgun
, Patrice Degoulet:
The Georges Pompidou University Hospital Clinical Data Warehouse: A 8-years follow-up experience. Int. J. Medical Informatics 102: 21-28 (2017) - [j31]Jean-François Ethier
, Vasa Curcin
, Mark M. McGilchrist, Sarah N. Lim Choi Keung
, Lei Zhao, Anna Andreasson
, Piotr Bródka
, Radoslaw Michalski
, Theodoros N. Arvanitis, Nikolaos Mastellos, Anita Burgun
, Brendan C. Delaney:
eSource for clinical trials: Implementation and evaluation of a standards-based approach in a real world trial. Int. J. Medical Informatics 106: 17-24 (2017) - [j30]Nicolas Garcelon
, Antoine Neuraz
, Vincent Benoit, Rémi Salomon, Anita Burgun
:
Improving a full-text search engine: the importance of negation detection and family history context to identify cases in a biomedical data warehouse. J. Am. Medical Informatics Assoc. 24(3): 607-613 (2017) - [j29]Nicolas Garcelon
, Antoine Neuraz
, Vincent Benoit, Rémi Salomon, Sven Kracker
, Felipe Suarez, Nadia Bahi-Buisson
, Smail Hadj-Rabia, Alain Fischer, Arnold Munnich, Anita Burgun
:
Finding patients using similarity measures in a rare diseases-oriented clinical data warehouse: Dr. Warehouse and the needle in the needle stack. J. Biomed. Informatics 73: 51-61 (2017) - [j28]Jean-Baptiste Escudié
, Bastien Rance
, Georgia Malamut, Sherine Khater, Anita Burgun
, Christophe Cellier, Anne-Sophie Jannot:
A novel data-driven workflow combining literature and electronic health records to estimate comorbidities burden for a specific disease: a case study on autoimmune comorbidities in patients with celiac disease. BMC Medical Informatics Decis. Mak. 17(1): 140:1-140:10 (2017) - [c71]Christina Khnaisser, Luc Lavoie, Anita Burgun, Jean-François Ethier:
Past Indeterminacy in Data Warehouse Design. DEXA (2) 2017: 90-100 - [c70]Xiaoyi Chen, Myrtille Deldossi, Rim Aboukhamis, Carole Faviez, Badisse Dahamna, Pierre Karapetiantz, Armelle Guenegou-Arnoux, Yannick Girardeau, Sylvie Guillemin-Lanne, Agnès Lillo-Le Louët, Nathalie Texier, Anita Burgun, Sandrine Katsahian:
Mining Adverse Drug Reactions in Social Media with Named Entity Recognition and Semantic Methods. MedInfo 2017: 322-326 - [i1]Jean-François Ethier, Vasa Curcin, Mark M. McGilchrist, Sarah N. Lim Choi Keung, Lei Zhao, Anna Andreasson, Piotr Bródka, Radoslaw Michalski, Theodoros N. Arvanitis, Nikolaos Mastellos, Anita Burgun, Brendan C. Delaney:
eSource for clinical trials: Implementation and evaluation of a standards-based approach in a real world trial. CoRR abs/1707.07994 (2017) - 2016
- [j27]Dimitar Hristovski, Andrej Kastrin, Dejan Dinevski
, Anita Burgun
, Lovro Ziberna, Thomas C. Rindflesch:
Using Literature-Based Discovery to Explain Adverse Drug Effects. J. Medical Syst. 40(8): 185:1-185:5 (2016) - 2015
- [j26]Vincent Canuel
, Bastien Rance
, Paul Avillach, Patrice Degoulet, Anita Burgun
:
Translational research platforms integrating clinical and omics data: a review of publicly available solutions. Briefings Bioinform. 16(2): 280-290 (2015) - [j25]Arnaud Rosier
, Philippe Mabo, Michel Chauvin, Anita Burgun
:
An Ontology-Based Annotation of Cardiac Implantable Electronic Devices to Detect Therapy Changes in a National Registry. IEEE J. Biomed. Health Informatics 19(3): 971-978 (2015) - [c69]Jean-Baptiste Escudié, Anne-Sophie Jannot, Eric Zapletal, Sarah Cohen Boulakia, Georgia Malamut, Anita Burgun, Bastien Rance:
Reviewing 741 patients records in two hours with FASTVISU. AMIA 2015 - [c68]Sarah N. Lim Choi Keung
, Lei Zhao, Vasa Curcin
, Jean-François Ethier
, Anita Burgun, Mark M. McGilchrist, Piotr Bródka
, Wodzimierz Tuligowicz, Brendan C. Delaney, Theodoros N. Arvanitis
, Anna Andreasson
:
Transform: Implementing a Learning Healthcare System in Europe through Embedding Clinical Research into Clinical Practice. HICSS 2015: 3176-3185 - [c67]Adrien Barton, Régis Duvauferrier, Anita Burgun:
Formalization of indicators of diagnostic performance in a realist ontology. ICBO 2015 - [c66]Anita Burgun, Dina V. Oksen, Wolfgang Kuchinke, Hans-Ulrich Prokosch, Thomas Ganslandt, Iain E. Buchan, Tjeerd Pieter van Staa, James A. Cunningham, Marianne L. Gjerstorff, Jean-Charles Dufour, Jean-François Gibrat, Macha Nikolski, Pierre Verger, Anne Cambon-Thomsen, Cristina Masella, Emanuele Lettieri, Paolo Bertele, Marjut Salokannel, Rodolphe Thiébaut, Charles Persoz, Geneviève Chêne, Christian Ohmann:
Proposal for a European Public Health Research Infrastructure for Sharing of health and Medical administrative data (PHRIMA). MedInfo 2015: 1005 - [c65]Sandrine Katsahian, Erica Simond Moreau, Damien Leprovost, Jérémy Lardon, Cédric Bousquet, Gaétan Kerdelhué
, Redhouane Abdellaoui, Nathalie Texier, Anita Burgun, Abdelali Boussadi, Carole Faviez:
Evaluation of Internet Social Networks using Net scoring Tool: A Case Study in Adverse Drug Reaction Mining. MIE 2015: 526-530 - 2014
- [j24]Anne-Dominique Pham, Aurélie Névéol, Thomas Lavergne, Daisuke Yasunaga, Olivier Clément
, Guy Meyer, Rémy Morello, Anita Burgun
:
Natural language processing of radiology reports for the detection of thromboembolic diseases and clinically relevant incidental findings. BMC Bioinform. 15: 266 (2014) - [c64]Adrien Barton, Arnaud Rosier, Anita Burgun, Jean-François Ethier
:
The Cardiovascular Disease Ontology. FOIS 2014: 409-414 - [c63]Nicolas Garcelon, Rémi Salomon, Anita Burgun:
Enrichissement sémantique associé à la détection de la négation et des antécédents familiaux dans un entrepôt de données hospitalier. JFIM 2014: 83-93 - 2013
- [j23]Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun
, Marc Cuggia:
OWL model of clinical trial eligibility criteria compatible with partially-known information. J. Biomed. Semant. 4: 17 (2013) - [j22]Jean-François Ethier
, Olivier Dameron, Vasa Curcin
, Mark M. McGilchrist, Robert A. Verheij, Theodoros N. Arvanitis
, Adel Taweel
, Brendan Delaney
, Anita Burgun
:
A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm. J. Am. Medical Informatics Assoc. 20(5): 986-994 (2013) - [j21]Antoine Neuraz
, Laurent Chouchana
, Georgia Malamut
, Christine Le Beller, Denis Roche, Philippe Beaune
, Patrice Degoulet, Anita Burgun
, Marie-Anne Loriot
, Paul Avillach:
Phenome-Wide Association Studies on a Quantitative Trait: Application to TPMT Enzyme Activity and Thiopurine Therapy in Pharmacogenomics. PLoS Comput. Biol. 9(12) (2013) - [c62]Dimitar Hristovski, Anita Burgun-Parenthoine, Paul Avillach, Thomas C. Rindflesch:
Preliminary Evaluation of a Literature-based Discovery Method for Explaining Drug Adverse Effects. AMIA 2013 - 2012
- [j20]Charles Bettembourg, Christian Diot, Anita Burgun
, Olivier Dameron:
GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J. Biomed. Semant. 3: 7 (2012) - [c61]Dimitar Hristovski, Anita Burgun, Paul Avillach, Thomas C. Rindflesch:
Using Literature-based Discovery to Explain Drug Adverse Effects. AMIA 2012 - [c60]Adrien Barton, Anita Burgun, Régis Duvauferrier:
Probability assignments to dispositions in ontologies. FOIS 2012: 3-14 - [c59]Fleur Mougin
, Anita Burgun, Olivier Bodenreider:
Comparing drug-class membership in ATC and NDF-RT. IHI 2012: 437-444 - [c58]Jérémy Lasbleiz, John Morelli, Nicolas Schnel, Anita Burgun, Régis Duvauferrier, Hervé Saint-Jalmes:
MRI image artifact ontology: A Proposed Method for Improved Recognition. MIE 2012: 103-107 - [c57]Pascal Van Hille, Julie Jacques, Julien Taillard, Arnaud Rosier, David Delerue, Anita Burgun, Olivier Dameron:
Comparing Drools and ontology reasoning approaches for telecardiology decision support. MIE 2012: 300-304 - [c56]Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia:
OWL Model of Clinical Trial Eligibility Criteria Compatible with Partially-known Information. SWAT4LS 2012 - 2011
- [c55]Jérémy Lasbleiz, Hervé Saint-Jalmes, Régis Duvauferrier, Anita Burgun:
Creating a Magnetic Resonance Imaging Ontology. MIE 2011: 784-788 - 2010
- [c54]Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron:
Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS 2010: 845-848 - [c53]Denis Delamarre, Agnès Lillo-Le Louët, Laetitia Guillot, Anne Jamet, Eric Sadou, Theo Ouazine, Anita Burgun, Marie-Christine Jaulent:
Documentation in Pharmacovigilance: Using an ontology to extend and normalize Pubmed queries. MedInfo 2010: 518-522 - [c52]Lynda Temal, Arnaud Rosier, Olivier Dameron, Anita Burgun:
Mapping BFO and DOLCE. MedInfo 2010: 1065-1069 - [c51]Olivier Bodenreider, Anita Burgun:
A Framework for Comparing Phenotype Annotations of Orthologous Genes. MedInfo 2010: 1309-1313 - [c50]Paolo Besana, Marc Cuggia, Oussama Zekri, Annabel Bourde, Anita Burgun:
Using Semantic Web Technologies for Clinical Trial Recruitment. International Semantic Web Conference (2) 2010: 34-49 - [c49]Paolo Besana, Marc Cuggia, Oussama Zekri, Annabel Bourde, Anita Burgun:
From French EHR to NCI ontology via UMLS. OM 2010
2000 – 2009
- 2009
- [j19]Fleur Mougin
, Olivier Bodenreider, Anita Burgun
:
Analyzing polysemous concepts from a clinical perspective: Application to auditing concept categorization in the UMLS. J. Biomed. Informatics 42(3): 440-451 (2009) - [c48]Anita Burgun, Fleur Mougin, Olivier Bodenreider:
Two approaches to integrating phenotype and clinical information. AMIA 2009 - [c47]Florence Amardeilh, Cédric Bousquet, Sylvie Guillemin-Lanne, Mathilde Wiss-Thébault, Laetitia Guillot, Denis Delamarre, Agnès Lillo-Le Louët, Anita Burgun:
A Knowledge Management Platform for Documentation of Case Reports in Pharmacovigilance. MIE 2009: 517-521 - [c46]Fleur Mougin, Olivier Bodenreider, Anita Burgun:
Identifying anatomical concepts associated with ICD10 diseases. TIA 2009 - 2008
- [j18]Valérie Bertaud, Jérémy Lasbleiz
, Fleur Mougin
, Anita Burgun
, Régis Duvauferrier:
A unified representation of findings in clinical radiology using the UMLS and DICOM. Int. J. Medical Informatics 77(9): 621-629 (2008) - [c45]Arnaud Rosier, Anita Burgun, Philippe Mabo:
Using regular expressions to extract information on pacemaker implantation procedures from clinical reports. AMIA 2008 - [c44]Fleur Mougin
, Anita Burgun, Olivier Bodenreider, Julie Chabalier, Olivier Loréal
, Pierre Le Beux:
Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. DILS 2008: 61-76 - [c43]Delphine Rossille, Anita Burgun, Céline Pangault-Lorho, Thierry Fest:
Integrating clinical, gene expression, protein expression and preanalytical data for in silico cancer research. MIE 2008: 455-460 - 2007
- [j17]Olivier Bodenreider, Barry Smith
, Anand Kumar, Anita Burgun
:
Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. Artif. Intell. Medicine 39(3): 183-195 (2007) - [j16]Julie Chabalier, Jean Mosser, Anita Burgun
:
A transversal approach to predict gene product networks from ontology-based similarity. BMC Bioinform. 8 (2007) - [j15]Gwenaëlle Marquet, Jean Mosser, Anita Burgun
:
A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: The case of OBO disease ontologies. Int. J. Medical Informatics 76(S3): S353-S361 (2007) - [c42]Gwenaëlle Marquet, Olivier Dameron, Stephan Saikali, Jean Mosser, Anita Burgun:
Grading glioma tumors using OWL-DL and NCI Thesaurus. AMIA 2007 - [c41]Fleur Mougin, Julie Chabalier, Olivier Bodenreider, Anita Burgun:
Méthodes de mapping situées aux niveaux instance et schéma pour l'intégration de sources de données hétérogènes. Actes d'IC 2007: 37-49 - [c40]Julie Chabalier, Jean Mosser, Anita Burgun:
Integrating Biological Pathways in Disease Ontologies. MedInfo 2007: 791-795 - 2006
- [j14]Marc Aubry, Annabelle Monnier, Celine Chicault, Marie de Tayrac, Marie-Dominique Galibert, Anita Burgun
, Jean Mosser:
Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets. BMC Bioinform. 7: 241 (2006) - [j13]Fleur Mougin
, Anita Burgun
, Olivier Bodenreider:
Mapping data elements to terminological resources for integrating biomedical data sources. BMC Bioinform. 7(S-3) (2006) - [j12]Anita Burgun
, Stéfan Jacques Darmoni, Franck Le Duff
, Jacques Wéber:
Problem-based learning in medical informatics for undergraduate medical students: An experiment in two medical schools. Int. J. Medical Informatics 75(5): 396-402 (2006) - [j11]Paul Fabry, Robert H. Baud, Anita Burgun
, Christian Lovis
:
Amplification of Terminologia anatomica by French language terms using Latin terms matching algorithm: A prototype for other language. Int. J. Medical Informatics 75(7): 542-552 (2006) - [j10]Anita Burgun
:
Desiderata for domain reference ontologies in biomedicine. J. Biomed. Informatics 39(3): 307-313 (2006) - [j9]Emilie Guérin, Gwenaëlle Marquet, Julie Chabalier, Marie-Bérengère Troadec, Christiane Guguen-Guillouzo, Olivier Loréal, Anita Burgun, Fouzia Moussouni:
Combining biomedical knowledge and transcriptomic data to extract new knowledge on genes. J. Integr. Bioinform. 3(2) (2006) - [c39]Fleur Mougin, Anita Burgun, Olivier Bodenreider:
Using WordNet to Improve the Mapping of Data Elements to UMLS for Data Sources Integration. AMIA 2006 - [c38]Nicolas Garcelon, Fleur Mougin, Cédric Bousquet, Anita Burgun:
Evidence in pharmacovigilance: extracting Adverse Drug Reactions articles from MEDLINE to link them to case databases. MIE 2006: 528-533 - [c37]Gwenaëlle Marquet, Jean Mosser, Anita Burgun:
Aligning biomedical ontologies using lexical methods and the UMLS: the case of Disease ontologies. MIE 2006: 781-786 - [c36]Fleur Mougin, Anita Burgun, Olivier Bodenreider:
Data Integration through data elements: Mapping data elements to terminological resources. SMBM 2006 - 2005
- [j8]Pierre Zweigenbaum, Robert H. Baud, Anita Burgun
, Fiammetta Namer, Éric Jarrousse, Natalia Grabar, Patrick Ruch
, Franck Le Duff
, Jean-François Forget, Magaly Douyère, Stéfan Jacques Darmoni:
UMLF: a unified medical lexicon for French. Int. J. Medical Informatics 74(2-4): 119-124 (2005) - [j7]Delphine Rossille
, Jean-François Laurent, Anita Burgun
:
Modelling a decision-support system for oncology using rule-based and case-based reasoning methodologies. Int. J. Medical Informatics 74(2-4): 299-306 (2005) - [c35]Anita Burgun, Olivier Bodenreider, Fleur Mougin:
Classifying diseases with respect to anatomy: a study in SNOMED CT. AMIA 2005 - [c34]Emilie Guérin, Gwenaëlle Marquet, Anita Burgun, Olivier Loréal
, Laure Berti-Équille
, Ulf Leser, Fouzia Moussouni:
Integrating and Warehousing Liver Gene Expression Data and Related Biomedical Resources in GEDAW. DILS 2005: 158-174 - [c33]Valérie Bertaud, Jérémy Lasbleiz, Fleur Mougin, Franck Marin, Anita Burgun, Régis Duvauferrier:
Toward a Unified Representation of Findings in Clinical Radiology. MIE 2005: 671-676 - [c32]Anita Burgun, Olivier Bodenreider, Christian Jacquelinet:
Issues in the Classification of Disease Instances with Ontologies. MIE 2005: 695-700 - [c31]Olivier Bodenreider, Marc Aubry, Anita Burgun:
Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology. Pacific Symposium on Biocomputing 2005: 104-115 - 2004
- [c30]Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun:
Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . KR-MED 2004: 12-20 - [c29]Olivier Bodenreider, Anita Burgun:
Aligning Knowledge Sources in the UMLS: Methods, Quantitative Results, and Applications. MedInfo 2004: 327-331 - [c28]Fleur Mougin
, Anita Burgun, Olivier Loréal, Pierre Le Beux:
Towards the automatic generation of biomedical sources schema. MedInfo 2004: 783-787 - [c27]Tuan Due Tran, Nicolas Garcelon
, Anita Burgun, Pierre Le Beux:
Experiments in cross-language medical information retrieval using a mixing translation module. MedInfo 2004: 946-949 - 2003
- [j6]André Happe, Bruno Pouliquen, Anita Burgun, Marc Cuggia, Pierre Le Beux:
Automatic concept extraction from spoken medical reports. Int. J. Medical Informatics 70(2-3): 255-263 (2003) - [j5]Christian Jacquelinet, Anita Burgun, Denis Delamarre, Nigel Strang, Sami Djabbour, Bernard Boutin, Pierre Le Beux:
Developing the ontological foundations of a terminological system for end-stage diseases, organ failure, dialysis and transplantation. Int. J. Medical Informatics 70(2-3): 317-328 (2003) - [j4]Elizabeth Medélez Ortega, Anita Burgun, Franck Le Duff
, Pierre Le Beux:
Collaborative environment for clinical reasoning and distance learning sessions. Int. J. Medical Informatics 70(2-3): 345-351 (2003) - [c26]Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun:
How to Represent Medical Ontologies in View of a Semantic Web? AIME 2003: 51-60 - [c25]Pierre Zweigenbaum, Robert H. Baud, Anita Burgun, Fiammetta Namer, Éric Jarrousse, Natalia Grabar, Patrick Ruch, Franck Le Duff, Benoît Thirion, Stéfan Jacques Darmoni:
UMLF: a Unified Medical Lexicon for French. AMIA 2003 - [c24]Gwenaëlle Marquet, Anita Burgun, Fouzia Moussouni, Emilie Guérin, Franck Le Duff, Olivier Loréal:
BioMeKe : an ontology-based biomedical knowledge extraction system devoted to transcriptome analysis. MIE 2003: 80-85 - [c23]Olivier Bodenreider, Anita Burgun, Joyce A. Mitchell:
Evaluation of WordNet as a source of lay knowledge for molecular biology and genetic diseases: A feasibility study. MIE 2003: 379-384 - [c22]Olivier Dameron, Anita Burgun, Xavier Morandi, Bernard Gibaud:
Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base. MIE 2003: 403-408 - [c21]Pierre Zweigenbaum, Robert H. Baud, Anita Burgun, Fiammetta Namer, Éric Jarrousse, Natalia Grabar, Patrick Ruch, Franck Le Duff, Benoît Thirion, Stéfan Jacques Darmoni:
Towards a Unified Medical Lexicon for French. MIE 2003: 415-420 - [c20]Christian Jacquelinet, Anita Burgun, Sami Djabbour, Denis Delamarre, Patrick Clerc, Bernard Boutin, Pierre Le Beux:
A contextual coding system for transplantation and end stage diseases. MIE 2003: 457-462 - [c19]Delphine Rossille, Jean-François Laurent, Anita Burgun:
Modelling of a case-based retrieval system for oncology. MIE 2003: 565-570 - [c18]Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun:
Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine. International Semantic Web Conference 2003: 180-194 - 2002
- [j3]Olivier Bodenreider, Anita Burgun, Thomas C. Rindflesch:
Assessing the consistency of a biomedical terminology through lexical knowledge. Int. J. Medical Informatics 67(1-3): 85-95 (2002) - [c17]Olivier Bodenreider, Thomas C. Rindflesch, Anita Burgun:
Unsupervised, corpus-based method for extending a biomedical terminology. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 53-60 - [c16]Anita Burgun, Olivier Bodenreider, Franck Le Duff, Fouzia Moussouni, Olivier Loréal:
Representation of roles in biomedical ontologies: a case study in functional genomics. AMIA 2002 - [c15]Olivier Dameron, Bernard Gibaud, Anita Burgun, Xavier Morandi:
Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy: lessons learned from a prototype. AMIA 2002 - 2001
- [c14]Anita Burgun, Olivier Bodenreider:
Mapping the UMLS Semantic Network into general ontologies. AMIA 2001 - [c13]Anita Burgun, Olivier Bodenreider:
Aspects of the taxonomic relation in the biomedical domain. FOIS 2001: 222-233 - [c12]Anita Burgun, Olivier Bodenreider:
Methods for Exploring the Semantics of the Relationships between Co-occurring UMLS Concepts. MedInfo 2001: 171-175 - [c11]Alexa T. McCray, Anita Burgun, Olivier Bodenreider:
Aggregating UMLS Semantic Types for Reducing Conceptual Complexity. MedInfo 2001: 216-220 - [c10]Christian Jacquelinet, Anita Burgun, Denis Delamarre, Nigel Strang, Bernard Boutin, Pierre Le Beux:
Building an Ontology for End-stage Diseases and Organ Failure in the Context of Transplantation and Dialysis. MedInfo 2001: 297 - [c9]Elizabeth Medélez Ortega, Anita Burgun, Franck Le Duff, Pierre Le Beux:
Design of a CSCL Environment for Clinical Reasoning Learning and Problem-Based Learning in Medicine. MedInfo 2001: 1056-1060 - [c8]Franck Le Duff, André Happe, Anita Burgun, Sophie Levionnois, Marc Brémond, Pierre Le Beux:
Sharing Medical Data for Patient Path Analysis with Data Mining Method. MedInfo 2001: 1364-1368 - [c7]Robert H. Baud, Stephen B. Johnson, Christopher G. Chute, Olivier Bodenreider, Jeremy Rogers, Anita Burgun:
Natural Language Processing, Medical Terminologies, and Ontological Issues for Patient Records and Biomedical Knowledge. MedInfo 2001: 1533 - 2000
- [c6]Mireille Cleret, Franck Le Duff, Anita Burgun, Pierre Le Beux:
A Probabilistic Diagnostic Aid System on Internet, Using Data From a Large Medical Knowledge Base. AMIA 2000 - [c5]Franck Le Duff, Anita Burgun, Mireille Cleret, Bruno Pouliquen, Victoire Barac'h, Pierre Le Beux:
Knowledge acquisition to qualify Unified Medical Language System interconceptual relationships. AMIA 2000
1990 – 1999
- 1999
- [c4]Victoire Barac'h, Anita Burgun, Denis Delamarre, Pierre Le Beux:
A method for an automated decomposition of a complex term into its conceptual components. MIE 1999: 875-880 - [c3]Franck Le Duff, Anita Burgun, Bruno Pouliquen, Denis Delamarre, Pierre Le Beux:
Automatic enrichment of the Unified Medical Language System starting from the ADM knowledge base. MIE 1999: 881-886 - 1998
- [j2]Olivier Bodenreider, Anita Burgun, Geneviève Botti, Marius Fieschi, Pierre Le Beux, François Kohler:
Case Report: Evaluation of the Unified Medical Language System as a Medical Knowledge Source. J. Am. Medical Informatics Assoc. 5(1): 76-87 (1998) - [c2]