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Amarda Shehu

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▶ joint publications with Kevin Molloy

> Home > Persons > Amarda Shehu

Publications

2019
[i1]
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  - journals/corr/abs-1905-08331
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  - https://dblp.org/rec/journals/corr/abs-1905-08331
Kevin Molloy, Erion Plaku, Amarda Shehu:
ROMEO: A Plug-and-play Software Platform of Robotics-inspired Algorithms for Modeling Biomolecular Structures and Motions. CoRR abs/1905.08331 (2019)
2018
[c66]
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  dblp key:
  - conf/bcb/MolloyAS18
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  - https://dblp.org/rec/conf/bcb/MolloyAS18
Kevin Molloy, Nasrin Akhter, Amarda Shehu:
Modeling Macromolecular Structures and Motions: Computational Methods for Sampling and Analysis of Energy Landscapes. BCB 2018: 554
2017
[c60]
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  - conf/bcb/MolloyMS17
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  - https://dblp.org/rec/conf/bcb/MolloyMS17
Kevin Molloy, David Morris, Amarda Shehu:
ACM-BCB '17 Tutorial: Robotics-inspired Algorithms for Modeling Protein Structures and Motions. BCB 2017: 628
[c58]
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  dblp key:
  - conf/bcb/HaspelSM17
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  - https://dblp.org/rec/conf/bcb/HaspelSM17
Nurit Haspel, Amarda Shehu, Kevin Molloy:
The 2017 Computational Structural Bioinformatics Workshop: CSBW 2017. BCB 2017: 643
2016
[j20]
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  dblp key:
  - journals/robotica/MolloyCS16
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  - https://dblp.org/rec/journals/robotica/MolloyCS16
Kevin Molloy, Rudy Clausen, Amarda Shehu:
A stochastic roadmap method to model protein structural transitions. Robotica 34(8): 1705-1733 (2016)
2015
[c40]
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  dblp key:
  - conf/isbra/MolloyS15
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Kevin Molloy, Amarda Shehu:
Interleaving Global and Local Search for Protein Motion Computation. ISBRA 2015: 175-186
2014
[j14]
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  - journals/bmcbi/MolloyVBS14
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Kevin Molloy, M. Jennifer Van, Daniel Barbará, Amarda Shehu:
Exploring representations of protein structure for automated remote homology detection and mapping of protein structure space. BMC Bioinform. 15(S-8): S4 (2014)
2013
[j12]
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  - journals/tcbb/MolloySS13
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Kevin Molloy, Sameh N. Saleh, Amarda Shehu:
Probabilistic Search and Energy Guidance for Biased Decoy Sampling in Ab Initio Protein Structure Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 10(5): 1162-1175 (2013)
[c27]
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  - conf/iccabs/MolloyVBS13
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Kevin Molloy, M. Jennifer Van, Daniel Barbará, Amarda Shehu:
Higher-order representations of protein structure space. ICCABS 2013: 1-2
2012
[j11]
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  - journals/advai/OlsonHMS12
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Brian S. Olson, Irina Hashmi, Kevin Molloy, Amarda Shehu:
Basin Hopping as a General and Versatile Optimization Framework for the Characterization of Biological Macromolecules. Adv. Artif. Intell. 2012: 674832:1-674832:19 (2012)
[j7]
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  - journals/jbcb/OlsonMHS12
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Brian S. Olson, Kevin Molloy, S. Farid Hendi, Amarda Shehu:
Guiding Probabilistic Search of the protein conformational Space with Structural Profiles. J. Bioinform. Comput. Biol. 10(3) (2012)
[c25]
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  - conf/bcb/MolloyS12
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Kevin Molloy, Amarda Shehu:
Biased decoy sampling to aid the selection of near-native protein conformations. BCB 2012: 131-138
[c21]
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  - conf/bibm/MolloyS12
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Kevin Molloy, Amarda Shehu:
A robotics-inspired method to sample conformational paths connecting known functionally-relevant structures in protein systems. BIBM Workshops 2012: 56-63
[c15]
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  - conf/bibm/MolloyS12a
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Kevin Molloy, Amarda Shehu:
Mapping conformational pathways between known functional protein states. BIBM Workshops 2012: 971
[c14]
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  - conf/bibm/MolloyS12b
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Kevin Molloy, Amarda Shehu:
A tree-based search to bias sampling of protein decoy conformations. BIBM Workshops 2012: 978
2011
[j4]
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  dblp key:
  - journals/jbcb/OlsonMS11
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Brian S. Olson, Kevin Molloy, Amarda Shehu:
In Search of the protein Native State with a Probabilistic Sampling Approach. J. Bioinform. Comput. Biol. 9(3): 383-398 (2011)
[c8]
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  - conf/bibm/MolloyS11
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Kevin Molloy, Amarda Shehu:
Assembly of low-energy protein conformations with heterogeneous fragments. BIBM Workshops 2011: 991-993
2010
[c5]
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  dblp key:
  - conf/bionetics/OlsonMS10
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Brian S. Olson, Kevin Molloy, Amarda Shehu:
Enhancing Sampling of the Conformational Space Near the Protein Native State. BIONETICS 2010: 249-263

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