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Publications
- 2017
[j9]Liang Sun, Yongnan Zhu, A. S. M. Ashique Mahmood, Catalina O. Tudor, Jia Ren, K. Vijay-Shanker, Jian Chen, Carl J. Schmidt
:
WebGIVI: a web-based gene enrichment analysis and visualization tool. BMC Bioinform. 18(1): 237:1-237:10 (2017)- 2016
- [j8]Samir Gupta, Karen E. Ross, Catalina O. Tudor, Cathy H. Wu, Carl J. Schmidt, K. Vijay-Shanker:
miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases. J. Biomed. Semant. 7: 9 (2016) - 2015
- [j7]Catalina O. Tudor, Karen E. Ross, Gang Li, K. Vijay-Shanker, Cathy H. Wu, Cecilia N. Arighi:
Construction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system. Database J. Biol. Databases Curation 2015 (2015) - 2014
- [j6]Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, K. Vijay-Shanker:
iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system. Database J. Biol. Databases Curation 2014 (2014) - 2013
- [j4]Luis D. Lopez, Jingyi Yu, Cecilia N. Arighi, Catalina O. Tudor, Manabu Torii, Hongzhan Huang, K. Vijay-Shanker, Cathy H. Wu:
A framework for biomedical figure segmentation towards image-based document retrieval. BMC Syst. Biol. 7(S-4): S8 (2013) - 2012
- [j3]Lakshmi R. Pillai, Philippe Chouvarine, Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker, Fiona M. McCarthy:
Developing a biocuration workflow for AgBase, a non-model organism database. Database J. Biol. Databases Curation 2012 (2012) - [j2]Catalina O. Tudor, Cecilia N. Arighi, Qinghua Wang, Cathy H. Wu, K. Vijay-Shanker:
The eFIP system for text mining of protein interaction networks of phosphorylated proteins. Database J. Biol. Databases Curation 2012 (2012) - [c5]Luis D. Lopez, Jingyi Yu, Catalina O. Tudor, Cecilia N. Arighi, Hongzhan Huang, K. Vijay-Shanker, Cathy H. Wu:
Robust segmentation of biomedical figures for image-based document retrieval. BIBM 2012: 1-6 - [c4]Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, K. Vijay-Shanker:
iSimp: A sentence simplification system for biomedicail text. BIBM 2012: 1-6 - [c3]Carl J. Schmidt, Liang Sun, Cecilia N. Arighi, Keith Decker, K. Vijay-Shanker, Manabu Torii, Catalina O. Tudor, Cathy H. Wu, Peter D'Eustachio:
Pathway curation: Application of text-mining tools eGIFT and RLIMS-P. BIBM Workshops 2012: 523-528 - [c2]Catalina O. Tudor, K. Vijay-Shanker:
RankPref: Ranking Sentences Describing Relations between Biomedical Entities with an Application. BioNLP@HLT-NAACL 2012: 163-171 - 2010
- [j1]Catalina O. Tudor, Carl J. Schmidt, K. Vijay-Shanker:
eGIFT: Mining Gene Information from the Literature. BMC Bioinform. 11: 418 (2010) - 2008
- [c1]Catalina O. Tudor, K. Vijay-Shanker, Carl J. Schmidt:
Mining the Biomedical Literature for Genic Information. BioNLP 2008: 28-29
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