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ORCIDElisa Ficarra
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Publications
- 2014
[j19]Francesco Abate, Sakellarios Zairis, Elisa Ficarra
, Andrea Acquaviva, Chris H. Wiggins, Veronique Frattini, Anna Lasorella, Antonio Iavarone, Giorgio Inghirami, Raul Rabadan:
Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer. BMC Syst. Biol. 8: 97 (2014)- 2013
- [j15]Francesco Abate, Andrea Acquaviva, Elisa Ficarra, Enrico Macii:
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring. ACM J. Emerg. Technol. Comput. Syst. 9(4): 28:1-28:22 (2013) - [j14]Francesco Abate, Andrea Acquaviva, Elisa Ficarra, Roberto Piva, Enrico Macii:
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes. IEEE ACM Trans. Comput. Biol. Bioinform. 10(3): 619-631 (2013) - [c22]Giulia Paciello, Elisa Ficarra, Alberto Zamò, Chiara Pighi, Carmelo Foti, Francesco Abate, Enrico Macii, Andrea Acquaviva:
A Novel Pipeline for V(D)J Junction Identification using RNA-Seq Paired-end Reads. BIOINFORMATICS 2013: 185-189 - 2012
- [j13]Francesco Abate, Andrea Acquaviva, Giulia Paciello, Carmelo Foti, Elisa Ficarra, Alberto Ferrarini, Massimo Delledonne, Ilaria Iacobucci, Simona Soverini, Giovanni Martinelli, Enrico Macii:
Bellerophontes: an RNA-Seq data analysis framework for chimeric transcripts discovery based on accurate fusion model. Bioinform. 28(16): 2114-2121 (2012) - [c21]Francesco Abate, Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, Alberto Ferrarini, Massimo Delledonne, Enrico Macii:
A Novel Analysis Flow for Fused Transcripts Discovery from Paired-end RNA-Seq Data. BIOINFORMATICS 2012: 331-334 - 2011
- [c17]Francesco Abate, Andrea Acquaviva, Elisa Ficarra, Giulia Paciello, Enrico Macii, Alberto Ferrarini, Massimo Delledonne, Simona Soverini, Giovanni Martinelli:
A novel framework for chimeric transcript detection based on accurate gene fusion model. BIBM Workshops 2011: 34-41 - [c15]Francesco Abate, Andrea Acquaviva, Elisa Ficarra, Enrico Macii:
A New Latent Semantic Analysis based Methodology for Knowledge Extraction from Biomedical Literature and Biological Pathways Databases. BIOINFORMATICS 2011: 66-74 - [c14]Francesco Abate, Elisa Ficarra, Andrea Acquaviva, Enrico Macii:
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases. BIOSTEC (Selected Papers) 2011: 173-187 - 2010
- [c9]Francesco Abate, Elisa Ficarra, Andrea Acquaviva, Enrico Macii:
An Automated Tool for Scoring Biomedical Terms Correlation Based on Semantic Analysis. CISIS 2010: 700-705
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