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ORCIDKeith R. Bisset
- > Home > Persons > Keith R. Bisset
Publications
- 2017
[j6]S. M. Shamimul Hasan
, Edward A. Fox, Keith R. Bisset, Madhav V. Marathe:
EpiK: A Knowledge Base for Epidemiological Modeling and Analytics of Infectious Diseases. J. Heal. Informatics Res. 1(2): 260-303 (2017)- [c44]Abhinav Bhatele, Jae-Seung Yeom, Nikhil Jain, Chris J. Kuhlman, Yarden Livnat, Keith R. Bisset, Laxmikant V. Kalé, Madhav V. Marathe:
Massively Parallel Simulations of Spread of Infectious Diseases over Realistic Social Networks. CCGrid 2017: 689-694 - 2016
- [j5]Ashwin M. Aji, Lokendra S. Panwar, Feng Ji, Karthik Murthy, Milind Chabbi, Pavan Balaji, Keith R. Bisset, James Dinan, Wu-chun Feng, John M. Mellor-Crummey, Xiaosong Ma, Rajeev Thakur:
MPI-ACC: Accelerator-Aware MPI for Scientific Applications. IEEE Trans. Parallel Distributed Syst. 27(5): 1401-1414 (2016) - 2015
- [c43]Suruchi Deodhar, Jiangzhuo Chen, Mandy L. Wilson, Keith R. Bisset, Christopher L. Barrett, Madhav V. Marathe:
EpiCaster: an integrated web application for situation assessment and forecasting of global epidemics. BCB 2015: 156-165 - [c42]Suruchi Deodhar, Jiangzhuo Chen, Mandy L. Wilson, Manikandan Soundarapandian, Keith R. Bisset, Bryan L. Lewis, Christopher L. Barrett, Madhav V. Marathe:
Flu Caster: A Pervasive Web Application for High Resolution Situation Assessment and Forecasting of Flu Outbreaks. ICHI 2015: 105-114 - [c41]Tariq Kamal, Keith R. Bisset, Ali Raza Butt, Madhav V. Marathe:
Cost Estimation of Parallel Constrained Producer-Consumer Algorithms. PDP 2015: 86-93 - 2014
- [j4]Suruchi Deodhar, Keith R. Bisset, Jiangzhuo Chen, Yifei Ma, Madhav V. Marathe:
An Interactive, Web-Based High Performance Modeling Environment for Computational Epidemiology. ACM Trans. Manag. Inf. Syst. 5(2): 7:1-7:27 (2014) - [j3]Keith R. Bisset, Jiangzhuo Chen, Suruchi Deodhar, Xizhou Feng, Yifei Ma, Madhav V. Marathe:
Indemics: An interactive high-performance computing framework for data-intensive epidemic modeling. ACM Trans. Model. Comput. Simul. 24(1): 4:1-4:32 (2014) - [c40]Tariq Kamal, Keith R. Bisset, Ali Raza Butt, Madhav V. Marathe:
Load analysis and cost estimation of parallel constrained producer-consumer algorithms. CLUSTER 2014: 286-287 - [c39]Sherif Hanie El Meligy Abdelhamid, Md. Maksudul Alam, Richard A. Aló, Shaikh Arifuzzaman, Peter H. Beckman, Tirtha Bhattacharjee, Md Hasanuzzaman Bhuiyan, Keith R. Bisset, Stephen G. Eubank, Albert C. Esterline, Edward A. Fox, Geoffrey C. Fox, S. M. Shamimul Hasan, Harshal Hayatnagarkar, Maleq Khan, Chris J. Kuhlman, Madhav V. Marathe, Natarajan Meghanathan, Henning S. Mortveit, Judy Qiu, S. S. Ravi, Zalia Shams, Ongard Sirisaengtaksin, Samarth Swarup, Anil Kumar S. Vullikanti, Tak-Lon Wu:
CINET 2.0: A CyberInfrastructure for Network Science. eScience 2014: 324-331 - [c38]Lukasz Wesolowski, Ramprasad Venkataraman, Abhishek Gupta, Jae-Seung Yeom, Keith R. Bisset, Yanhua Sun, Pritish Jetley, Thomas R. Quinn, Laxmikant V. Kalé:
TRAM: Optimizing Fine-Grained Communication with Topological Routing and Aggregation of Messages. ICPP 2014: 211-220 - [c37]Jae-Seung Yeom, Abhinav Bhatele, Keith R. Bisset, Eric J. Bohm, Abhishek Gupta, Laxmikant V. Kalé, Madhav V. Marathe, Dimitrios S. Nikolopoulos, Martin Schulz, Lukasz Wesolowski:
Overcoming the Scalability Challenges of Epidemic Simulations on Blue Waters. IPDPS 2014: 755-764 - [c36]S. M. Shamimul Hasan, Sandeep Gupta, Edward A. Fox, Keith R. Bisset, Madhav V. Marathe:
Data mapping framework in a digital library with computational epidemiology datasets. JCDL 2014: 449-450 - [c35]Richard J. Beckman, Keith R. Bisset, Jiangzhuo Chen, Bryan L. Lewis, Madhav V. Marathe, Paula Elaine Stretz:
ISIS: a networked-epidemiology based pervasive web app for infectious disease pandemic planning and response. KDD 2014: 1847-1856 - [c34]Karthik Channakeshava, Keith R. Bisset, Madhav V. Marathe, Anil Kumar S. Vullikanti:
Reasoning about mobile malware using high performance computing based population scale models. WSC 2014: 3048-3059 - 2013
- [j2]Adria Carbo, Raquel Hontecillas, Barbara Kronsteiner, Monica Viladomiu, Mireia Pedragosa, Pinyi Lu, Casandra W. Philipson, Stefan Hoops, Madhav V. Marathe, Stephen G. Eubank, Keith R. Bisset, Katherine V. Wendelsdorf, Abdul Salam Jarrah, Yongguo Mei, Josep Bassaganya-Riera:
Systems Modeling of Molecular Mechanisms Controlling Cytokine-driven CD4+ T Cell Differentiation and Phenotype Plasticity. PLoS Comput. Biol. 9(4) (2013) - [c33]Christopher L. Barrett, Keith R. Bisset, Jiangzhuo Chen, Stephen G. Eubank, Bryan L. Lewis, V. S. Anil Kumar, Madhav V. Marathe, Henning S. Mortveit:
Interactions among human behavior, social networks, and societal infrastructures: A Case Study in Computational Epidemiology. Fundamental Problems in Computing 2013: 477-507 - [c32]Keith R. Bisset, Suruchi Deodhar, Hemanth Makkapati, Madhav V. Marathe, Paula Elaine Stretz, Christopher L. Barrett:
Simfrastructure: A Flexible and Adaptable Middleware Platform for Modeling and Analysis of Socially Coupled Systems. CCGRID 2013: 506-513 - [c31]Samarth Swarup, Kristian Lum, Christopher L. Barrett, Keith R. Bisset, Stephen G. Eubank, Madhav V. Marathe, Paula Elaine Stretz:
A Synthetic Information Approach to Urban-Scale Disaster Modeling. CSE 2013: 1105-1112 - [c30]Tariq Kamal, Keith R. Bisset, Ali Raza Butt, Youngyun Chungbaek, Madhav V. Marathe:
Load balancing in large-scale epidemiological simulations. HPDC 2013: 123-124 - [c29]Ashwin M. Aji, Lokendra S. Panwar, Feng Ji, Milind Chabbi, Karthik Murthy, Pavan Balaji, Keith R. Bisset, James Dinan, Wu-chun Feng, John M. Mellor-Crummey, Xiaosong Ma, Rajeev Thakur:
On the efficacy of GPU-integrated MPI for scientific applications. HPDC 2013: 191-202 - [c28]S. M. Shamimul Hasan, Keith R. Bisset, Edward A. Fox, Kevin Hall, Jonathan Leidig, Madhav V. Marathe:
An Extensible Digital Library Service to Support Network Science. ICCS 2013: 419-428 - [c27]Christopher L. Barrett, Keith R. Bisset, Shridhar Chandan, Jiangzhuo Chen, Youngyun Chungbaek, Stephen G. Eubank, C. Yaman Evrenosoglu, Bryan L. Lewis, Kristian Lum, Achla Marathe, Madhav V. Marathe, Henning S. Mortveit, Nidhi Kiranbhai Parikh, Arun G. Phadke, Jeffrey H. Reed, Caitlin M. Rivers, Sudip Saha, Paula Elaine Stretz, Samarth Swarup, James S. Thorp, Anil Vullikanti, Dawen Xie:
Planning and response in the aftermath of a large crisis: An agent-based informatics framework. WSC 2013: 1515-1526 - [p1]Keith R. Bisset, Ashwin M. Aji, Tariq Kamal, Jae-Seung Yeom, Madhav V. Marathe, Eric J. Bohm, Abhishek Gupta:
Contagion Diffusion with EpiSimdemics. Parallel Science and Engineering Applications 2013: 211-246 - 2012
- [c26]Yongguo Mei, Raquel Hontecillas, Xiaoying Zhang, Keith R. Bisset, Stephen G. Eubank, Stefan Hoops, Madhav V. Marathe, Josep Bassaganya-Riera:
ENISI Visual, an agent-based simulator for modeling gut immunity. BIBM 2012: 1-5 - [c25]Sherif Elmeligy Abdelhamid, Richard A. Aló, S. M. Arifuzzaman, Peter H. Beckman, Md Hasanuzzaman Bhuiyan, Keith R. Bisset, Edward A. Fox, Geoffrey Charles Fox, Kevin Hall, S. M. Shamimul Hasan, Anurodh Joshi, Maleq Khan, Chris J. Kuhlman, Spencer J. Lee, Jonathan Leidig, Hemanth Makkapati, Madhav V. Marathe, Henning S. Mortveit, Judy Qiu, S. S. Ravi, Zalia Shams, Ongard Sirisaengtaksin, Rajesh Subbiah, Samarth Swarup, Nick Trebon, Anil Vullikanti, Zhao Zhao:
CINET: A cyberinfrastructure for network science. eScience 2012: 1-8 - [c24]Ashwin M. Aji, James Dinan, Darius Buntinas, Pavan Balaji, Wu-chun Feng, Keith R. Bisset, Rajeev Thakur:
MPI-ACC: An Integrated and Extensible Approach to Data Movement in Accelerator-based Systems. HPCC-ICESS 2012: 647-654 - [c23]Christopher L. Barrett, Richard J. Beckman, Keith R. Bisset, Jiangzhuo Chen, Thomas M. DuBois, Stephen G. Eubank, V. S. Anil Kumar, Bryan L. Lewis, Madhav V. Marathe, Aravind Srinivasan, Paula Elaine Stretz:
Optimizing epidemic protection for socially essential workers. IHI 2012: 31-40 - [c22]Suruchi Deodhar, Keith R. Bisset, Jiangzhuo Chen, Yifei Ma, Madhav V. Marathe:
Enhancing user-productivity and capability through integration of distinct software in epidemiological systems. IHI 2012: 171-180 - [c21]Keith R. Bisset, Md. Maksudul Alam, Josep Bassaganya-Riera, Adria Carbo, Stephen G. Eubank, Raquel Hontecillas, Stefan Hoops, Yongguo Mei, Katherine V. Wendelsdorf, Dawen Xie, Jae-Seung Yeom, Madhav V. Marathe:
High-Performance Interaction-Based Simulation of Gut Immunopathologies with ENteric Immunity Simulator (ENISI). IPDPS 2012: 48-59 - [c20]Keith R. Bisset, Ashwin M. Aji, Eric J. Bohm, Laxmikant V. Kalé, Tariq Kamal, Madhav V. Marathe, Jae-Seung Yeom:
Simulating the Spread of Infectious Disease over Large Realistic Social Networks Using Charm++. IPDPS Workshops 2012: 507-518 - [c19]Keith R. Bisset, Stephen G. Eubank, Madhav V. Marathe:
High performance informatics for pandemic preparedness. WSC 2012: 72:1-72:12 - 2011
- [c18]Katherine V. Wendelsdorf, Josep Bassaganya-Riera, Keith R. Bisset, Stephen G. Eubank, Raquel Hontecillas, Madhav V. Marathe:
ENteric Immunity SImulator: A Tool for in silico Study of Gut Immunopathologies. BIBM 2011: 462-469 - [c17]Yifei Ma, Keith R. Bisset, Jiangzhuo Chen, Suruchi Deodhar, Madhav V. Marathe:
Formal Specification and Experimental Analysis of an Interactive Epidemic Simulation Framework. HPCC 2011: 790-795 - [c16]Keith R. Bisset, Ashwin M. Aji, Madhav V. Marathe, Wu-chun Feng:
High-performance biocomputing for simulating the spread of contagion over large contact networks. ICCABS 2011: 26-32 - [c15]Karthik Channakeshava, Keith R. Bisset, V. S. Anil Kumar, Madhav V. Marathe, Shrirang M. Yardi:
High Performance Scalable and Expressive Modeling Environment to Study Mobile Malware in Large Dynamic Networks. IPDPS 2011: 770-781 - [c14]Keith R. Bisset, Ashwin M. Aji, Tariq Kamal, Jae-Seung Yeom:
Poster: large-scale computational epidemiology modeling using charm++. SC Companion 2011: 77-78 - [c13]Yifei Ma, Keith R. Bisset, Jiangzhuo Chen, Suruchi Deodhar, Madhav V. Marathe:
Efficient implementation of complex interventions in large scale epidemic simulations. WSC 2011: 1354-1366 - [c12]Keith R. Bisset, Jiangzhuo Chen, Chris J. Kuhlman, V. S. Anil Kumar, Madhav V. Marathe:
Interaction-based HPC modeling of social, biological, and economic contagions over large networks. WSC 2011: 2938-2952 - 2010
- [j1]Christopher L. Barrett, Keith R. Bisset, Jonathan Leidig, Achla Marathe, Madhav V. Marathe:
An Integrated Modeling Environment to Study the Co-evolution of Networks, Individual Behavior and Epidemics. AI Mag. 31(1): 75-87 (2010) - [c11]Keith R. Bisset, Jiangzhuo Chen, Xizhou Feng, Yifei Ma, Madhav V. Marathe:
Indemics: an interactive data intensive framework for high performance epidemic simulation. ICS 2010: 233-242 - 2009
- [c10]Christopher L. Barrett, Keith R. Bisset, Jonathan Leidig, Achla Marathe, Madhav V. Marathe:
Estimating the Impact of Public and Private Strategies for Controlling an Epidemic: A Multi-Agent Approach. IAAI 2009 - [c9]Keith R. Bisset, Jiangzhuo Chen, Xizhou Feng, V. S. Anil Kumar, Madhav V. Marathe:
EpiFast: a fast algorithm for large scale realistic epidemic simulations on distributed memory systems. ICS 2009: 430-439 - [c8]Karthik Channakeshava, Deepti Chafekar, Keith R. Bisset, V. S. Anil Kumar, Madhav V. Marathe:
EpiNet: a simulation framework to study the spread of malware in wireless networks. SimuTools 2009: 6 - [c7]Keith R. Bisset, Xizhou Feng, Madhav V. Marathe, Shrirang M. Yardi:
Modeling Interaction between Individuals, Social Networks and Public Policy to Support Public Health Epidemiology. WSC 2009: 2020-2031 - 2008
- [c6]Christopher L. Barrett, Keith R. Bisset, Martin Holzer, Goran Konjevod, Madhav V. Marathe, Dorothea Wagner:
Engineering Label-Constrained Shortest-Path Algorithms. AAIM 2008: 27-37 - [c5]Christopher L. Barrett, Keith R. Bisset, Stephen G. Eubank, Xizhou Feng, Madhav V. Marathe:
EpiSimdemics: an efficient algorithm for simulating the spread of infectious disease over large realistic social networks. SC 2008: 37 - 2007
- [c4]Christopher L. Barrett, Keith R. Bisset, Stephen G. Eubank, Edward A. Fox, Yi Ma, Madhav V. Marathe, Xiaoyu Zhang:
A Scalable Data Management Tool to Support Epidemiological Modeling of Large Urban Regions. ECDL 2007: 546-548 - 2006
- [c3]Christopher L. Barrett, Keith R. Bisset, Martin Holzer, Goran Konjevod, Madhav V. Marathe, Dorothea Wagner:
Engineering Label-Constrained Shortest-Path Algorithms. The Shortest Path Problem 2006: 309-319 - 2002
- [c2]Christopher L. Barrett, Keith R. Bisset, Riko Jacob, Goran Konjevod, Madhav V. Marathe:
Classical and Contemporary Shortest Path Problems in Road Networks: Implementation and Experimental Analysis of the TRANSIMS Router. ESA 2002: 126-138
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