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Malika Smaïl-Tabbone

Malika Smaïl

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affiliation: INRIA, France

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2010 – today

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2019
[c39]
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Kevin Dalleau, Miguel Couceiro, Malika Smaïl-Tabbone:
Les forêts d'arbres extrêmement aléatoires : utilisation dans un cadre non supervisé. EGC 2019: 395-400
2018
[c38]
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Yelen Per, Kevin Dalleau, Malika Smaïl-Tabbone:
Exploration et analyses multi-objectifs de séries temporelles de données météorologiques. EGC 2018: 427-438
[c37]
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Kevin Dalleau, Miguel Couceiro, Malika Smaïl-Tabbone:
Unsupervised Extremely Randomized Trees. PAKDD (3) 2018: 478-489
[c36]
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Gabin Personeni, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Philippe Jonveaux, Céline Bonnet, Adrien Coulet:
Cooperation of bio-ontologies for the classification of genetic intellectual disabilities : a diseasome approach. SWAT4LS 2018
2017
[j12]
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Gabin Personeni, Emmanuel Bresso, Marie-Dominique Devignes, Michel Dumontier, Malika Smaïl-Tabbone, Adrien Coulet:
Discovering associations between adverse drug events using pattern structures and ontologies. J. Biomedical Semantics 8(1): 29:1-29:13 (2017)
[c35]
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Yelen Per, Kevin Dalleau, Malika Smaïl-Tabbone:
Prédiction de défauts dans les arbres du parc végétal Grenoblois et préconisations pour les futures plantations. EGC 2017: 237-248
[i4]
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  - journals/corr/abs-1708-07074
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Sabeur Aridhi, Seyed Ziaeddin Alborzi, Malika Smaïl-Tabbone, Marie-Dominique Devignes, David W. Ritchie:
Neighborhood-Based Label Propagation in Large Protein Graphs. CoRR abs/1708.07074 (2017)
2016
[i3]
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Adrien Coulet, Malika Smaïl-Tabbone:
Mining Electronic Health Records to Validate Knowledge in Pharmacogenomics. ERCIM News 2016(104) (2016)
[i2]
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Marie-Dominique Devignes, Malika Smaïl-Tabbone, David W. Ritchie:
Kbdock - Searching and Organising the Structural Space of Protein-Protein Interactions. ERCIM News 2016(104) (2016)
2014
[b1]
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Malika Smaïl-Tabbone:
Contributions à l'extraction de connaissances à partir de données biologiques. (Contribution to knowledge extraction from biological data). University of Lorraine, Nancy, France 2014
[j11]
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Anisah W. Ghoorah, Marie-Dominique Devignes, Malika Smaïl-Tabbone, David W. Ritchie:
KBDOCK 2013: a spatial classification of 3D protein domain family interactions. Nucleic Acids Research 42(Database-Issue): 389-395 (2014)
[c34]
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Gabin Personeni, Simon Daget, Céline Bonnet, Philippe Jonveaux, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Adrien Coulet:
Mining Linked Open Data: A Case Study with Genes Responsible for Intellectual Disability. DILS 2014: 16-31
2013
[j10]
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Emmanuel Bresso, Renaud Grisoni, Gino Marchetti, Arnaud Sinan Karaboga, Michel Souchet, Marie-Dominique Devignes, Malika Smaïl-Tabbone:
Integrative relational Machine-Learning Approach for Understanding Drug Side-Effect Profiles. BMC Bioinformatics 14: 207 (2013)
[c33]
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Rachid Hafiane, Malika Smaïl-Tabbone, Marie-Dominique Devignes, Salvatore Tabbone:
Clustering optimal de gènes fondé sur une mesure de similarité sémantique. CORIA 2013: 323-336
[c32]
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Mehwish Alam, Melisachew Wudage Chekol, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone:
Lattice Based Data Access (LBDA): An Approach for Organizing and Accessing Linked Open Data in Biology. DMoLD 2013
2012
[j9]
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Marie-Dominique Devignes, Sidahmed Benabderrahmane, Malika Smaïl-Tabbone, Amedeo Napoli, Olivier Poch:
Functional classification of genes using semantic distance and fuzzy clustering approach: evaluation with reference sets and overlap analysis. I. J. Computational Biology and Drug Design 5(3/4): 245-260 (2012)
[c31]
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Mehwish Alam, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone:
Formal Concept Analysis Applied to Transcriptomic Data. CLA 2012: 339-344
[c30]
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Mehwish Alam, Adrien Coulet, Amedeo Napoli, Malika Smaïl-Tabbone:
Formal Concept Analysis Applied to Transcriptomic Data. FCA4AI@ECAI 2012: 7-14
[c29]
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  - conf/ic3k/BressoGDNS12a
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Emmanuel Bresso, Renaud Grisoni, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
ILP Characterization of 3D Protein-Binding Sites and FCA-Based Interpretation. IC3K 2012: 84-100
[c28]
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Emmanuel Bresso, Renaud Grisoni, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Formal Concept Analysis for the Interpretation of Relational Learning Applied on 3D Protein-binding Sites. KDIR 2012: 111-120
2011
[j8]
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  - journals/bioinformatics/GhoorahDSR11
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Anisah W. Ghoorah, Marie-Dominique Devignes, Malika Smaïl-Tabbone, David W. Ritchie:
Spatial clustering of protein binding sites for template based protein docking. Bioinformatics 27(20): 2820-2827 (2011)
[c27]
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Sidahmed Benabderrahmane, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Amedeo Napoli, Olivier Poch:
Ontology-based functional classification of genes: Evaluation with reference sets and overlap analysis. BIBM Workshops 2011: 201-208
[c26]
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Emmanuel Bresso, Sidahmed Benabderrahmane, Malika Smaïl-Tabbone, Gino Marchetti, Arnaud Sinan Karaboga, Michel Souchet, Amedeo Napoli, Marie-Dominique Devignes:
Use of Domain Knowledge for Dimension Reduction - Application to Mining of Drug Side Effects. KDIR 2011: 271-276
2010
[j7]
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Sidahmed Benabderrahmane, Malika Smaïl-Tabbone, Olivier Poch, Amedeo Napoli, Marie-Dominique Devignes:
IntelliGO: a new vector-based semantic similarity measure including annotation origin. BMC Bioinformatics 11: 588 (2010)
[j6]
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Marie-Dominique Devignes, Philippe Franiatte, Nizar Messai, Emmanuel Bresso, Amedeo Napoli, Malika Smaïl-Tabbone:
BioRegistry: Automatic extraction of metadata for biological database retrieval and discovery. IJMSO 5(3): 184-193 (2010)
[j5]
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Leo Ghemtio, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Michel Souchet, Vincent Leroux, Bernard Maigret:
Comparison of Three Preprocessing Filters Efficiency in Virtual Screening: Identification of New Putative LXRβ Regulators As a Test Case. Journal of Chemical Information and Modeling 50(5): 701-715 (2010)
[c25]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Using Domain Knowledge to Guide Lattice-based Complex Data Exploration. ECAI 2010: 847-852
[c24]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Connaissances de domaine et treillis de concepts pour l'exploration progressive de données complexes. IC 2010: 233-244

2000 – 2009

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2009
[j4]
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S. Yilmaz, Philippe Jonveaux, C. Bicep, Laurent Pierron, Malika Smaïl-Tabbone, Marie-Dominique Devignes:
Gene-disease relationship discovery based on model-driven data integration and database view definition. Bioinformatics 25(2): 230-236 (2009)
[c23]
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Leo Ghemtio, Malika Smaïl-Tabbone, Marie-Dominique Devignes, Michel Souchet, Bernard Maigret:
A KDD Approach for Designing Filtering Strategies to Improve Virtual Screening. KDIR 2009: 146-151
[c22]
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Sidahmed Benabderrahmane, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Amedeo Napoli, Olivier Poch, Ngoc-Hoan Nguyen, Wolfgang Raffelsberger:
Analyse de données transcriptomiques: Modélisation floue de profils d'expression différentielle et analyse fonctionnelle. INFORSID 2009: 413-428
2008
[j3]
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Adrien Coulet, Malika Smaïl-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes:
Ontology-guided data preparation for discovering genotype-phenotype relationships. BMC Bioinformatics 9(S-4) (2008)
[c21]
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  - conf/dlog/CouletSND08
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Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes:
Ontology Refinement through Role Assertion Analysis: Example in Pharmacogenomics. Description Logics 2008
[c20]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Many-Valued Concept Lattices for Conceptual Clustering and Information Retrieval. ECAI 2008: 127-131
[c19]
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  - conf/iccs/MessaiDNS08
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Extending Attribute Dependencies for Lattice-Based Querying and Navigation. ICCS 2008: 189-202
[c18]
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  - conf/iiwas/DevignesFMNS08
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Marie-Dominique Devignes, Philippe Franiatte, Nizar Messai, Amedeo Napoli, Malika Smaïl-Tabbone:
BioRegistry: automatic extraction of metadata for biological database retrieval and discovery. iiWAS 2008: 456-461
[c17]
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  - conf/stairs/CouletSND08
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Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes:
Role Assertion Analysis: a proposed method for ontology refinement through assertion learning. STAIRS 2008: 47-58
2007
[c16]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Traitement d'attributs inter-dépendants pour la recherche d'information par treillis. Actes d'IC 2007: 109-121
[c15]
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  - conf/wise/DevignesS07
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Marie-Dominique Devignes, Malika Smaïl-Tabbone:
Workshop PC Chairs' Message. WISE Workshops 2007: 3-4
2006
[j2]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Treillis de concepts et ontologies pour interroger l'annuaire de sources de données biologiques BioRegistry. Ingénierie des Systèmes d'Information 11(1): 39-60 (2006)
[c14]
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  - conf/dils/CouletSBND06
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Adrien Coulet, Malika Smaïl-Tabbone, Pascale Benlian, Amedeo Napoli, Marie-Dominique Devignes:
SNP-Converter: An Ontology-Based Solution to Reconcile Heterogeneous SNP Descriptions for Pharmacogenomic Studies. DILS 2006: 82-93
[c13]
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Adrien Coulet, Malika Smaïl-Tabbone, Amedeo Napoli, Marie-Dominique Devignes:
Suggested Ontology for Pharmacogenomics (SO-Pharm): Modular Construction and Preliminary Testing. OTM Workshops (1) 2006: 648-657
2005
[c12]
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  - conf/complife/Smail-TabboneOMND05
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Malika Smaïl-Tabbone, Shazia Osman, Nizar Messai, Amedeo Napoli, Marie-Dominique Devignes:
BioRegistry: A Structured Metadata Repository for Bioinformatic Databases. CompLife 2005: 46-56
[c11]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Méthode sémantique pour la classification et l'iinterrogation de sources de données biologiques. EGC (Ateliers) 2005: 43-48
[c10]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Querying a Bioinformatic Data Sources Registry with Concept Lattices. ICCS 2005: 323-336
[c9]
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Nizar Messai, Marie-Dominique Devignes, Amedeo Napoli, Malika Smaïl-Tabbone:
Treillis de concepts et ontologies pour l'interrogation d'un annuaire de sources de données biologiques (BioRegistry). INFORSID 2005: 587-602
[i1]
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  - journals/corr/abs-cs-0506017
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Nizar Messai, Marie-Dominique Devignes, Malika Smaïl-Tabbone, Amedeo Napoli:
Treillis de concepts et ontologies pour l'interrogation d'un annuaire de sources de données biologiques (BioRegistry). CoRR abs/cs/0506017 (2005)
2002
[j1]
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Marie-Dominique Devignes, André Schaaff, Malika Smaïl:
Collecte et intégration de données biologiques hétérogènes sur le web. Ingénierie des Systèmes d'Information 7(1-2): 45-61 (2002)
[c8]
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  - conf/ecir/DuffingS02
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Gérald Duffing, Malika Smaïl:
Organising and Searching Partially Indexed Image Databases. ECIR 2002: 22-40
2000
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Gérald Duffing, Malika Smaïl:
A Novel Approach for Accessing Partially Indexed Image Corpora. VISUAL 2000: 244-256

1990 – 1999

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1999
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Malika Smaïl:
Recherche de régularités dans un mémoire de sessions de recherche d'information documentaire. INFORSID 1999: 95-113
1996
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Brigitte Simonnot, Malika Smaïl:
Model for Interactive Retrieval of Videos and Still Images. Multimedia Database Systems 1996: 278-317
1995
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Brigitte Simonnot, Malika Smaïl:
Model for Interactive Retrieval of Videos and Still Images. IW-MMDBMS 1995: 128-135
1994
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Malika Smaïl, Marion Créhange:
Case-Based Reasoning Meets Information Retrieval. RIAO 1994: 172-185
1993
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Malika Smaïl, Marion Créhange:
Adaption par Cas des Stratégies de Recherche d'Information. BDA 1993: 155-174
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Malika Smaïl:
Case-Based Information Retrieval. EWCBR 1993: 404-413
1991
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Odile Foucaut, Noureddine Mouaddib, Malika Smaïl:
Assistance à la recherche dans une base d'objets complexes nuancés. BDA 1991: 429-

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