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2010 – 2019
- 2018
[j10]Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz
, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin M. Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas:
Journal of Open Source Software (JOSS): design and first-year review. PeerJ Comput. Sci. 4: e147 (2018)- 2017
- [j9]Steffen Möller, Stuart W. Prescott, Lars Wirzenius, Petter Reinholdtsen, Brad Chapman, Pjotr Prins, Stian Soiland-Reyes, Fabian Klötzl, Andrea Bagnacani, Matús Kalas, Andreas Tille, Michael R. Crusoe:
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis. Data Science and Engineering 2(3): 232-244 (2017) - [c2]Alexander García Castro, Erick Antezana, Jael García, Olga L. Giraldo, Pjotr Prins, Rutger A. Vos:
Shō-coin: A Knowledge-Based Economy for Life Sciences. SWAT4LS 2017 - [i1]Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin Mattheus Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas:
Journal of Open Source Software (JOSS): design and first-year review. CoRR abs/1707.02264 (2017) - 2016
- [d2]Zachary Sloan, Danny Arends, Karl W. Broman, Arthur Centeno, Nicholas A. Furlotte, Harm Nijveen, Lei Yan, Xiang Zhou, Robert W. Williams, Pjotr Prins:
GeneNetwork: framework for web-based genetics. J. Open Source Softw. 1(2): 25 (2016) - [d1]Danny Arends, Yang Li, Gudrun A. Brockmann, Ritsert C. Jansen, Robert W. Williams, Pjotr Prins:
Correlation Trait Loci (CTL) mapping: phenotype network inference subject to genotype. J. Open Source Softw. 1(6): 87 (2016) - 2015
- [j8]Artem Tarasov, Albert J. Vilella, Edwin Cuppen, Isaac J. Nijman, Pjotr Prins:
Sambamba: fast processing of NGS alignment formats. Bioinform. 31(12): 2032-2034 (2015) - 2014
- [j7]Steffen Möller, Enis Afgan, Michael Banck, Raoul Jean Pierre Bonnal, Timothy Booth, John Chilton, Peter J. A. Cock, Markus Gumbel, Nomi L. Harris, Richard C. G. Holland, Matús Kalas, László Kaján, Eri Kibukawa, David R. Powell, Pjotr Prins, Jacqueline Quinn, Olivier Sallou, Francesco Strozzi, Torsten Seemann, Clare Sloggett, Stian Soiland-Reyes, William Spooner, Sascha Steinbiss, Andreas Tille, Anthony J. Travis, Roman Guimera, Toshiaki Katayama, Brad A. Chapman:
Community-driven development for computational biology at Sprints, Hackathons and Codefests. BMC Bioinform. 15(S-14): S7 (2014) - 2012
- [j6]Caroline Durrant, Morris A. Swertz, Rudi Alberts, Danny Arends, Steffen Möller, Richard Mott, Pjotr Prins, K. Joeri van der Velde, Ritsert C. Jansen, Klaus Schughart:
Bioinformatics tools and database resources for systems genetics analysis in mice - a short review and an evaluation of future needs. Briefings in Bioinformatics 13(2): 135-142 (2012) - [j5]Raoul Jean Pierre Bonnal, Jan Aerts, George Githinji, Naohisa Goto, Daniel MacLean, Chase A. Miller, Hiroyuki Mishima, Massimiliano Pagani, Ricardo Ramirez-Gonzalez, Geert Smant, Francesco Strozzi, Rob Syme, Rutger A. Vos, Trevor J. Wennblom, Ben J. Woodcroft, Toshiaki Katayama, Pjotr Prins:
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics. Bioinform. 28(7): 1035-1037 (2012) - [j4]Danny Arends, K. Joeri van der Velde, Pjotr Prins, Karl W. Broman, Steffen Möller, Ritsert C. Jansen, Morris A. Swertz:
xQTL workbench: a scalable web environment for multi-level QTL analysis. Bioinform. 28(7): 1042-1044 (2012) - [c1]Dhananjay M. Balan, Tomas Malinauskas, Pjotr Prins, Steffen Möller:
High-throughput Molecular Docking Now in Reach for a Wider Biochemical Community. PDP 2012: 617-621 - 2010
- [j3]Naohisa Goto, Pjotr Prins, Mitsuteru Nakao, Raoul Jean Pierre Bonnal, Jan Aerts, Toshiaki Katayama:
BioRuby: bioinformatics software for the Ruby programming language. Bioinform. 26(20): 2617-2619 (2010) - [j2]Danny Arends, Pjotr Prins, Ritsert C. Jansen, Karl W. Broman:
R/qtl: high-throughput multiple QTL mapping. Bioinform. 26(23): 2990-2992 (2010) - [j1]Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita, Yasunori Yamamoto, Atsuko Yamaguchi, Shuichi Kawashima, Hong-Woo Chun, Jan Aerts, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández, Akira Funahashi, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge, Richard C. G. Holland, Yoshinobu Kano, Edward A. Kawas, Arnaud Kerhornou, Eri Kibukawa, Akira R. Kinjo, Michael Kuhn, Hilmar Lapp, Heikki Lehväslaiho, Hiroyuki Nakamura, Yasukazu Nakamura, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins, René Ranzinger, Florian Reisinger, Lukasz Salwínski, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles, Rutger A. Vos, Mark D. Wilkinson, William S. York, Christian M. Zmasek, Kiyoshi Asai, Toshihisa Takagi:
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. J. Biomedical Semantics 1: 8 (2010)
Coauthor Index
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