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ORCIDJooyoung Lee 0002
Person information
- affiliation: Korea Institute for Advanced Study, School of Computational Sciences, Seoul, South Korea
- affiliation (1994 - 2000): Cornell University, Ithaca, NY, USA
- affiliation (1992 - 1994): Florida State University, Tallahassee, FL, USA
- affiliation (1990 - 1992): Argonne National Laboratory, IL, USA
- affiliation (PhD 1990): Brown University, Providence, RI, USA
Other persons with the same name
- Jooyoung Lee — disambiguation page
- Jooyoung Lee 0001
![[0000-0001-5471-9350]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0000-0001-5471-9350")
— Korea Advanced Institute of Science and Technology (KAIST), School of Computing, Daejeon, South Korea (and 2 more) - Jooyoung Lee 0003 — Konkuk University, Seoul, South Korea
- Jooyoung Lee 0004 — Electronics and Telecommunications Research Institute (ETRI), Realistic Broadcast Media Research Laboratory, Daejeon, Korea
- Jooyoung Lee 0005 — Electronics and Telecommunications Research Institute (ETRI), Intelligence Security Research Group, Yuseong gu, South Korea
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2020 – today
- 2023
[j18]Jimin Park, InSuk Joung, Keehyoung Joo, Jooyoung Lee:
Application of conformational space annealing to the protein structure modeling using cryo-EM maps. J. Comput. Chem. 44(30): 2332-2346 (2023)- 2020
- [j17]Agnieszka S. Karczynska, Karolina Zieba, Urszula Uciechowska, Magdalena A. Mozolewska, Pawel Krupa, Emilia A. Lubecka, Agnieszka G. Lipska, Celina Sikorska, Sergey A. Samsonov, Adam K. Sieradzan, Artur Gieldon, Adam Liwo, Rafal Slusarz, Magdalena Slusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski:
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. J. Chem. Inf. Model. 60(3): 1844-1864 (2020)
2010 – 2019
- 2018
- [j16]InSuk Joung, Jong Yun Kim, Steven P. Gross, Keehyoung Joo, Jooyoung Lee:
Conformational Space Annealing explained: A general optimization algorithm, with diverse applications. Comput. Phys. Commun. 223: 28-33 (2018) - 2017
- [j15]Agnieszka S. Karczynska, Cezary Czaplewski, Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Adam Liwo:
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins. J. Comput. Chem. 38(31): 2730-2746 (2017) - [j14]Seungryong Heo, Juyong Lee, Keehyoung Joo, Hang-Cheol Shin, Jooyoung Lee:
Protein Loop Structure Prediction Using Conformational Space Annealing. J. Chem. Inf. Model. 57(5): 1068-1078 (2017) - 2016
- [j13]In-Ho Lee, Young Jun Oh, Sunghyun Kim, Jooyoung Lee, Kee Joo Chang:
Ab initio materials design using conformational space annealing and its application to searching for direct band gap silicon crystals. Comput. Phys. Commun. 203: 110-121 (2016) - [j12]Magdalena A. Mozolewska, Pawel Krupa, Bartlomiej Zaborowski, Adam Liwo, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski:
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field. J. Chem. Inf. Model. 56(11): 2263-2279 (2016) - [i3]Juyong Lee, Zhong-Yuan Zhang, Jooyoung Lee, Bernard R. Brooks, Yong-Yeol Ahn:
Link community detection through global optimization and the inverse resolution limit of partition density. CoRR abs/1601.05100 (2016) - 2015
- [j11]Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R. Brooks, Jooyoung Lee:
Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest. BMC Bioinform. 16: 94:1-94:12 (2015) - [j10]Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Cezary Czaplewski, Adam Liwo:
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field. J. Chem. Inf. Model. 55(6): 1271-1281 (2015) - [c2]Balachandran Manavalan, Kunihiro Kuwajima, InSuk Joung, Jooyoung Lee:
Structure-based protein folding type classification and folding rate prediction. BIBM 2015: 1759-1761 - 2014
- [j9]Joo-Hyun Seo, Jihyang Park, Eun-Mi Kim, Juhan Kim, Keehyoung Joo, Jooyoung Lee, Byung-Gee Kim:
Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm. Comput. Biol. Chem. 48: 64-70 (2014) - 2012
- [i2]Juyong Lee, Steven P. Gross, Jooyoung Lee:
Mod-CSA: Modularity optimization by conformational space annealing. CoRR abs/1202.5398 (2012) - [i1]Juyong Lee, Steven P. Gross, Jooyoung Lee:
Extraction of hidden information by efficient community detection in networks. CoRR abs/1209.2873 (2012) - 2011
- [j8]Woong-Hee Shin, Lim Heo, Juyong Lee, Junsu Ko, Chaok Seok, Jooyoung Lee:
LigDockCSA: Protein-ligand docking using conformational space annealing. J. Comput. Chem. 32(15): 3226-3232 (2011) - 2010
- [j7]In-Ho Lee, Seung-Yeon Kim, Jooyoung Lee:
Dynamic folding pathway models of the villin headpiece subdomain (HP-36) structure. J. Comput. Chem. 31(1): 57-65 (2010)
2000 – 2009
- 2008
- [j6]Jinwoo Lee, Keehyoung Joo, Seung-Yeon Kim, Jooyoung Lee:
Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing. J. Comput. Chem. 29(14): 2479-2484 (2008) - 2006
- [j5]Hyeon S. Son, Seung-Yeon Kim, Jooyoung Lee, Kyu-Kwang Han:
Application of the multiensemble sampling to the equilibrium folding of proteins. Bioinform. 22(15): 1832-1837 (2006) - 2005
- [j4]Kyoungrim Lee, Cezary Czaplewski, Seung-Yeon Kim, Jooyoung Lee:
An efficient molecular docking using conformational space annealing. J. Comput. Chem. 26(1): 78-87 (2005) - 2002
- [j3]Harold A. Scheraga, Jaroslaw Pillardy, Adam Liwo, Jooyoung Lee, Cezary Czaplewski, Daniel R. Ripoll, William J. Wedemeyer, Yelena A. Arnautova:
Evolution of physics-based methodology for exploring the conformational energy landscape of proteins. J. Comput. Chem. 23(1): 28-34 (2002) - 2000
- [c1]Adam Liwo, Jaroslaw Pillardy, Cezary Czaplewski, Jooyoung Lee, Daniel R. Ripoll, Malgorzata Groth, Sylwia Rodziewicz-Motowidlo, Rajmund Kazmierkiewicz, Ryszard J. Wawak, Stanislaw Oldziej, Harold A. Scheraga:
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms. RECOMB 2000: 193-200
1990 – 1999
- 1999
- [j2]Harold A. Scheraga, Jooyoung Lee, Jaroslaw Pillardy, Yuan-Jie Ye, Adam Liwo, Daniel R. Ripoll:
Surmounting the Multiple-Minima Problem in Protein Folding. J. Glob. Optim. 15(3): 235-260 (1999) - 1997
- [j1]Jooyoung Lee, Harold A. Scheraga, Shelly Rackovsky:
New optimization method for conformational energy calculations on polypeptides: Conformational space annealing. J. Comput. Chem. 18(9): 1222-1232 (1997)
Coauthor Index
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