BibTeX records: Jingru Yi

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@inproceedings{DBLP:conf/wacv/YiUI0GYL24,
  author       = {Jingru Yi and
                  Burak Uzkent and
                  Oana Ignat and
                  Zili Li and
                  Amanmeet Garg and
                  Xiang Yu and
                  Linda Liu},
  title        = {Augment the Pairs: Semantics-Preserving Image-Caption Pair Augmentation
                  for Grounding-Based Vision and Language Models},
  booktitle    = {{IEEE/CVF} Winter Conference on Applications of Computer Vision, {WACV}
                  2024, Waikoloa, HI, USA, January 3-8, 2024},
  pages        = {5508--5518},
  publisher    = {{IEEE}},
  year         = {2024},
  url          = {https://doi.org/10.1109/WACV57701.2024.00543},
  doi          = {10.1109/WACV57701.2024.00543},
  timestamp    = {Wed, 17 Apr 2024 07:41:22 +0200},
  biburl       = {https://dblp.org/rec/conf/wacv/YiUI0GYL24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/UzkentGZDYWO23,
  author       = {Burak Uzkent and
                  Amanmeet Garg and
                  Wentao Zhu and
                  Keval Doshi and
                  Jingru Yi and
                  Xiaolong Wang and
                  Mohamed Omar},
  title        = {Dynamic Inference with Grounding Based Vision and Language Models},
  booktitle    = {{IEEE/CVF} Conference on Computer Vision and Pattern Recognition,
                  {CVPR} 2023, Vancouver, BC, Canada, June 17-24, 2023},
  pages        = {2624--2633},
  publisher    = {{IEEE}},
  year         = {2023},
  url          = {https://doi.org/10.1109/CVPR52729.2023.00258},
  doi          = {10.1109/CVPR52729.2023.00258},
  timestamp    = {Mon, 28 Aug 2023 16:14:07 +0200},
  biburl       = {https://dblp.org/rec/conf/cvpr/UzkentGZDYWO23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2311-02536,
  author       = {Jingru Yi and
                  Burak Uzkent and
                  Oana Ignat and
                  Zili Li and
                  Amanmeet Garg and
                  Xiang Yu and
                  Linda Liu},
  title        = {Augment the Pairs: Semantics-Preserving Image-Caption Pair Augmentation
                  for Grounding-Based Vision and Language Models},
  journal      = {CoRR},
  volume       = {abs/2311.02536},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2311.02536},
  doi          = {10.48550/ARXIV.2311.02536},
  eprinttype    = {arXiv},
  eprint       = {2311.02536},
  timestamp    = {Thu, 23 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2311-02536.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/ZhangliYLHXCHGW22,
  author       = {Qilong Zhangli and
                  Jingru Yi and
                  Di Liu and
                  Xiaoxiao He and
                  Zhaoyang Xia and
                  Qi Chang and
                  Ligong Han and
                  Yunhe Gao and
                  Song Wen and
                  Haiming Tang and
                  He Wang and
                  Mu Zhou and
                  Dimitris N. Metaxas},
  editor       = {Linwei Wang and
                  Qi Dou and
                  P. Thomas Fletcher and
                  Stefanie Speidel and
                  Shuo Li},
  title        = {Region Proposal Rectification Towards Robust Instance Segmentation
                  of Biological Images},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2022 - 25th International Conference, Singapore, September 18-22,
                  2022, Proceedings, Part {IV}},
  series       = {Lecture Notes in Computer Science},
  volume       = {13434},
  pages        = {129--139},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-16440-8\_13},
  doi          = {10.1007/978-3-031-16440-8\_13},
  timestamp    = {Tue, 13 Dec 2022 14:39:06 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/ZhangliYLHXCHGW22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-02846,
  author       = {Qilong Zhangli and
                  Jingru Yi and
                  Di Liu and
                  Xiaoxiao He and
                  Zhaoyang Xia and
                  Haiming Tang and
                  He Wang and
                  Mu Zhou and
                  Dimitris N. Metaxas},
  title        = {Region Proposal Rectification Towards Robust Instance Segmentation
                  of Biological Images},
  journal      = {CoRR},
  volume       = {abs/2203.02846},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2203.02846},
  doi          = {10.48550/ARXIV.2203.02846},
  eprinttype    = {arXiv},
  eprint       = {2203.02846},
  timestamp    = {Fri, 09 Dec 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2203-02846.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/HuangXYQYWM21,
  author       = {Qiaoying Huang and
                  Yikun Xian and
                  Dong Yang and
                  Hui Qu and
                  Jingru Yi and
                  Pengxiang Wu and
                  Dimitris N. Metaxas},
  title        = {Dynamic {MRI} reconstruction with end-to-end motion-guided network},
  journal      = {Medical Image Anal.},
  volume       = {68},
  pages        = {101901},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.media.2020.101901},
  doi          = {10.1016/J.MEDIA.2020.101901},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mia/HuangXYQYWM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/YiWT0HQHFHM21,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Hui Tang and
                  Bo Liu and
                  Qiaoying Huang and
                  Hui Qu and
                  Lianyi Han and
                  Wei Fan and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Object-Guided Instance Segmentation With Auxiliary Feature Refinement
                  for Biological Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {40},
  number       = {9},
  pages        = {2403--2414},
  year         = {2021},
  url          = {https://doi.org/10.1109/TMI.2021.3077285},
  doi          = {10.1109/TMI.2021.3077285},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tmi/YiWT0HQHFHM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wacv/YiWLHQM21,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Bo Liu and
                  Qiaoying Huang and
                  Hui Qu and
                  Dimitris N. Metaxas},
  title        = {Oriented Object Detection in Aerial Images with Box Boundary-Aware
                  Vectors},
  booktitle    = {{IEEE} Winter Conference on Applications of Computer Vision, {WACV}
                  2021, Waikoloa, HI, USA, January 3-8, 2021},
  pages        = {2149--2158},
  publisher    = {{IEEE}},
  year         = {2021},
  url          = {https://doi.org/10.1109/WACV48630.2021.00220},
  doi          = {10.1109/WACV48630.2021.00220},
  timestamp    = {Thu, 09 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wacv/YiWLHQM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-07159,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Hui Tang and
                  Bo Liu and
                  Qiaoying Huang and
                  Hui Qu and
                  Lianyi Han and
                  Wei Fan and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Object-Guided Instance Segmentation With Auxiliary Feature Refinement
                  for Biological Images},
  journal      = {CoRR},
  volume       = {abs/2106.07159},
  year         = {2021},
  url          = {https://arxiv.org/abs/2106.07159},
  eprinttype    = {arXiv},
  eprint       = {2106.07159},
  timestamp    = {Wed, 27 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2106-07159.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/QuWHYYLRDZM20,
  author       = {Hui Qu and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Jingru Yi and
                  Zhennan Yan and
                  Kang Li and
                  Gregory M. Riedlinger and
                  Subhajyoti De and
                  Shaoting Zhang and
                  Dimitris N. Metaxas},
  title        = {Weakly Supervised Deep Nuclei Segmentation Using Partial Points Annotation
                  in Histopathology Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {39},
  number       = {11},
  pages        = {3655--3666},
  year         = {2020},
  url          = {https://doi.org/10.1109/TMI.2020.3002244},
  doi          = {10.1109/TMI.2020.3002244},
  timestamp    = {Mon, 02 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/QuWHYYLRDZM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/YiTWLHMHF20,
  author       = {Jingru Yi and
                  Hui Tang and
                  Pengxiang Wu and
                  Bo Liu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas and
                  Lianyi Han and
                  Wei Fan},
  title        = {Object-Guided Instance Segmentation for Biological Images},
  booktitle    = {The Thirty-Fourth {AAAI} Conference on Artificial Intelligence, {AAAI}
                  2020, The Thirty-Second Innovative Applications of Artificial Intelligence
                  Conference, {IAAI} 2020, The Tenth {AAAI} Symposium on Educational
                  Advances in Artificial Intelligence, {EAAI} 2020, New York, NY, USA,
                  February 7-12, 2020},
  pages        = {12677--12684},
  publisher    = {{AAAI} Press},
  year         = {2020},
  url          = {https://doi.org/10.1609/aaai.v34i07.6960},
  doi          = {10.1609/AAAI.V34I07.6960},
  timestamp    = {Wed, 27 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aaai/YiTWLHMHF20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccv/WuHYQYAM20,
  author       = {Pengxiang Wu and
                  Qiaoying Huang and
                  Jingru Yi and
                  Hui Qu and
                  Meng Ye and
                  Leon Axel and
                  Dimitris N. Metaxas},
  editor       = {Adrien Bartoli and
                  Andrea Fusiello},
  title        = {Cardiac {MR} Image Sequence Segmentation with Temporal Motion Encoding},
  booktitle    = {Computer Vision - {ECCV} 2020 Workshops - Glasgow, UK, August 23-28,
                  2020, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12535},
  pages        = {298--309},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-66415-2\_19},
  doi          = {10.1007/978-3-030-66415-2\_19},
  timestamp    = {Thu, 17 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/eccv/WuHYQYAM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/YiWHQM20,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Dimitris N. Metaxas},
  title        = {Vertebra-Focused Landmark Detection for Scoliosis Assessment},
  booktitle    = {17th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2020, Iowa City, IA, USA, April 3-7, 2020},
  pages        = {736--740},
  publisher    = {{IEEE}},
  year         = {2020},
  url          = {https://doi.org/10.1109/ISBI45749.2020.9098675},
  doi          = {10.1109/ISBI45749.2020.9098675},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/YiWHQM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/QuYHWM20,
  author       = {Hui Qu and
                  Jingru Yi and
                  Qiaoying Huang and
                  Pengxiang Wu and
                  Dimitris N. Metaxas},
  title        = {Nuclei Segmentation Using Mixed Points and Masks Selected From Uncertainty},
  booktitle    = {17th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2020, Iowa City, IA, USA, April 3-7, 2020},
  pages        = {973--976},
  publisher    = {{IEEE}},
  year         = {2020},
  url          = {https://doi.org/10.1109/ISBI45749.2020.9098474},
  doi          = {10.1109/ISBI45749.2020.9098474},
  timestamp    = {Sun, 07 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/QuYHWM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/YeHYWYAM20,
  author       = {Meng Ye and
                  Qiaoying Huang and
                  Dong Yang and
                  Pengxiang Wu and
                  Jingru Yi and
                  Leon Axel and
                  Dimitris N. Metaxas},
  editor       = {Esther Puyol{-}Ant{\'{o}}n and
                  Mihaela Pop and
                  Maxime Sermesant and
                  V{\'{\i}}ctor M. Campello and
                  Alain Lalande and
                  Karim Lekadir and
                  Avan Suinesiaputra and
                  Oscar Camara and
                  Alistair A. Young},
  title        = {{PC-U} Net: Learning to Jointly Reconstruct and Segment the Cardiac
                  Walls in 3D from {CT} Data},
  booktitle    = {Statistical Atlases and Computational Models of the Heart. M{\&}Ms
                  and {EMIDEC} Challenges - 11th International Workshop, {STACOM} 2020,
                  Held in Conjunction with {MICCAI} 2020, Lima, Peru, October 4, 2020,
                  Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {12592},
  pages        = {117--126},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-68107-4\_12},
  doi          = {10.1007/978-3-030-68107-4\_12},
  timestamp    = {Thu, 16 Mar 2023 20:00:44 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/YeHYWYAM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/HuangYXWYQM20,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Yikun Xian and
                  Pengxiang Wu and
                  Jingru Yi and
                  Hui Qu and
                  Dimitris N. Metaxas},
  editor       = {Mingxia Liu and
                  Pingkun Yan and
                  Chunfeng Lian and
                  Xiaohuan Cao},
  title        = {Enhanced {MRI} Reconstruction Network Using Neural Architecture Search},
  booktitle    = {Machine Learning in Medical Imaging - 11th International Workshop,
                  {MLMI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru, October
                  4, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12436},
  pages        = {634--643},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-59861-7\_64},
  doi          = {10.1007/978-3-030-59861-7\_64},
  timestamp    = {Tue, 18 Jan 2022 13:58:27 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/HuangYXWYQM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2001-03187,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Dimitris N. Metaxas},
  title        = {Vertebra-Focused Landmark Detection for Scoliosis Assessment},
  journal      = {CoRR},
  volume       = {abs/2001.03187},
  year         = {2020},
  url          = {https://arxiv.org/abs/2001.03187},
  eprinttype    = {arXiv},
  eprint       = {2001.03187},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2001-03187.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2007-05448,
  author       = {Hui Qu and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Jingru Yi and
                  Zhennan Yan and
                  Kang Li and
                  Gregory M. Riedlinger and
                  Subhajyoti De and
                  Shaoting Zhang and
                  Dimitris N. Metaxas},
  title        = {Weakly Supervised Deep Nuclei Segmentation Using Partial Points Annotation
                  in Histopathology Images},
  journal      = {CoRR},
  volume       = {abs/2007.05448},
  year         = {2020},
  url          = {https://arxiv.org/abs/2007.05448},
  eprinttype    = {arXiv},
  eprint       = {2007.05448},
  timestamp    = {Mon, 02 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2007-05448.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-07043,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Bo Liu and
                  Qiaoying Huang and
                  Hui Qu and
                  Dimitris N. Metaxas},
  title        = {Oriented Object Detection in Aerial Images with Box Boundary-Aware
                  Vectors},
  journal      = {CoRR},
  volume       = {abs/2008.07043},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.07043},
  eprinttype    = {arXiv},
  eprint       = {2008.07043},
  timestamp    = {Thu, 09 Dec 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-07043.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-08194,
  author       = {Meng Ye and
                  Qiaoying Huang and
                  Dong Yang and
                  Pengxiang Wu and
                  Jingru Yi and
                  Leon Axel and
                  Dimitris N. Metaxas},
  title        = {{PC-U} Net: Learning to Jointly Reconstruct and Segment the Cardiac
                  Walls in 3D from {CT} Data},
  journal      = {CoRR},
  volume       = {abs/2008.08194},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.08194},
  eprinttype    = {arXiv},
  eprint       = {2008.08194},
  timestamp    = {Thu, 17 Nov 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-08194.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-08248,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Yikun Xian and
                  Pengxiang Wu and
                  Jingru Yi and
                  Hui Qu and
                  Dimitris N. Metaxas},
  title        = {Enhanced {MRI} Reconstruction Network using Neural Architecture Search},
  journal      = {CoRR},
  volume       = {abs/2008.08248},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.08248},
  eprinttype    = {arXiv},
  eprint       = {2008.08248},
  timestamp    = {Fri, 29 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-08248.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cviu/YiWM19,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Dimitris N. Metaxas},
  title        = {{ASSD:} Attentive single shot multibox detector},
  journal      = {Comput. Vis. Image Underst.},
  volume       = {189},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.cviu.2019.102827},
  doi          = {10.1016/J.CVIU.2019.102827},
  timestamp    = {Fri, 21 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cviu/YiWM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/YiWJHHM19,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Menglin Jiang and
                  Qiaoying Huang and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Attentive neural cell instance segmentation},
  journal      = {Medical Image Anal.},
  volume       = {55},
  pages        = {228--240},
  year         = {2019},
  url          = {https://doi.org/10.1016/j.media.2019.05.004},
  doi          = {10.1016/J.MEDIA.2019.05.004},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/mia/YiWJHHM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/Wu0YM19,
  author       = {Pengxiang Wu and
                  Chao Chen and
                  Jingru Yi and
                  Dimitris N. Metaxas},
  title        = {Point Cloud Processing via Recurrent Set Encoding},
  booktitle    = {The Thirty-Third {AAAI} Conference on Artificial Intelligence, {AAAI}
                  2019, The Thirty-First Innovative Applications of Artificial Intelligence
                  Conference, {IAAI} 2019, The Ninth {AAAI} Symposium on Educational
                  Advances in Artificial Intelligence, {EAAI} 2019, Honolulu, Hawaii,
                  USA, January 27 - February 1, 2019},
  pages        = {5441--5449},
  publisher    = {{AAAI} Press},
  year         = {2019},
  url          = {https://doi.org/10.1609/aaai.v33i01.33015441},
  doi          = {10.1609/AAAI.V33I01.33015441},
  timestamp    = {Mon, 04 Sep 2023 12:29:24 +0200},
  biburl       = {https://dblp.org/rec/conf/aaai/Wu0YM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/YiWHQHM19,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Online Neural Cell Tracking Using Blob-Seed Segmentation and Optical
                  Flow},
  booktitle    = {{IEEE} Conference on Computer Vision and Pattern Recognition Workshops,
                  {CVPR} Workshops 2019, Long Beach, CA, USA, June 16-20, 2019},
  pages        = {1057--1064},
  publisher    = {Computer Vision Foundation / {IEEE}},
  year         = {2019},
  url          = {http://openaccess.thecvf.com/content\_CVPRW\_2019/html/CVMI/Yi\_Online\_Neural\_Cell\_Tracking\_Using\_Blob-Seed\_Segmentation\_and\_Optical\_Flow\_CVPRW\_2019\_paper.html},
  doi          = {10.1109/CVPRW.2019.00138},
  timestamp    = {Mon, 30 Aug 2021 17:04:30 +0200},
  biburl       = {https://dblp.org/rec/conf/cvpr/YiWHQHM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fimh/Huang0YAM19,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Jingru Yi and
                  Leon Axel and
                  Dimitris N. Metaxas},
  editor       = {Yves Coudi{\`{e}}re and
                  Val{\'{e}}ry Ozenne and
                  Edward J. Vigmond and
                  Nejib Zemzemi},
  title        = {FR-Net: Joint Reconstruction and Segmentation in Compressed Sensing
                  Cardiac {MRI}},
  booktitle    = {Functional Imaging and Modeling of the Heart - 10th International
                  Conference, {FIMH} 2019, Bordeaux, France, June 6-8, 2019, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11504},
  pages        = {352--360},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-21949-9\_38},
  doi          = {10.1007/978-3-030-21949-9\_38},
  timestamp    = {Fri, 31 May 2019 10:17:47 +0200},
  biburl       = {https://dblp.org/rec/conf/fimh/Huang0YAM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/QuRWHYDM19,
  author       = {Hui Qu and
                  Gregory M. Riedlinger and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Jingru Yi and
                  Subhajyoti De and
                  Dimitris N. Metaxas},
  title        = {Joint Segmentation and Fine-Grained Classification of Nuclei in Histopathology
                  Images},
  booktitle    = {16th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2019, Venice, Italy, April 8-11, 2019},
  pages        = {900--904},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ISBI.2019.8759457},
  doi          = {10.1109/ISBI.2019.8759457},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/QuRWHYDM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/YiWHQHM19,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Context-Refined Neural Cell Instance Segmentation},
  booktitle    = {16th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2019, Venice, Italy, April 8-11, 2019},
  pages        = {1028--1032},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ISBI.2019.8759204},
  doi          = {10.1109/ISBI.2019.8759204},
  timestamp    = {Mon, 15 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/YiWHQHM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/HuangYWQYM19,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Pengxiang Wu and
                  Hui Qu and
                  Jingru Yi and
                  Dimitris N. Metaxas},
  title        = {{MRI} Reconstruction Via Cascaded Channel-Wise Attention Network},
  booktitle    = {16th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2019, Venice, Italy, April 8-11, 2019},
  pages        = {1622--1626},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ISBI.2019.8759423},
  doi          = {10.1109/ISBI.2019.8759423},
  timestamp    = {Tue, 21 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/HuangYWQYM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/WuQYH0M19,
  author       = {Pengxiang Wu and
                  Hui Qu and
                  Jingru Yi and
                  Qiaoying Huang and
                  Chao Chen and
                  Dimitris N. Metaxas},
  title        = {Deep Attentive Feature Learning for Histopathology Image Classification},
  booktitle    = {16th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2019, Venice, Italy, April 8-11, 2019},
  pages        = {1865--1868},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ISBI.2019.8759267},
  doi          = {10.1109/ISBI.2019.8759267},
  timestamp    = {Mon, 15 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/WuQYH0M19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/YiWHQLHM19,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Bo Liu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  editor       = {Dinggang Shen and
                  Tianming Liu and
                  Terry M. Peters and
                  Lawrence H. Staib and
                  Caroline Essert and
                  Sean Zhou and
                  Pew{-}Thian Yap and
                  Ali R. Khan},
  title        = {Multi-scale Cell Instance Segmentation with Keypoint Graph Based Bounding
                  Boxes},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2019 - 22nd International Conference, Shenzhen, China, October 13-17,
                  2019, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11764},
  pages        = {369--377},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-32239-7\_41},
  doi          = {10.1007/978-3-030-32239-7\_41},
  timestamp    = {Mon, 19 Feb 2024 14:24:13 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/YiWHQLHM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/midl/HuangYQYWM19,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Hui Qu and
                  Jingru Yi and
                  Pengxiang Wu and
                  Dimitris N. Metaxas},
  editor       = {M. Jorge Cardoso and
                  Aasa Feragen and
                  Ben Glocker and
                  Ender Konukoglu and
                  Ipek Oguz and
                  Gozde B. Unal and
                  Tom Vercauteren},
  title        = {Dynamic {MRI} Reconstruction with Motion-Guided Network},
  booktitle    = {International Conference on Medical Imaging with Deep Learning, {MIDL}
                  2019, 8-10 July 2019, London, United Kingdom},
  series       = {Proceedings of Machine Learning Research},
  volume       = {102},
  pages        = {275--284},
  publisher    = {{PMLR}},
  year         = {2019},
  url          = {http://proceedings.mlr.press/v102/huang19a.html},
  timestamp    = {Tue, 21 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/midl/HuangYQYWM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/midl/QuWHYRDM19,
  author       = {Hui Qu and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Jingru Yi and
                  Gregory M. Riedlinger and
                  Subhajyoti De and
                  Dimitris N. Metaxas},
  editor       = {M. Jorge Cardoso and
                  Aasa Feragen and
                  Ben Glocker and
                  Ender Konukoglu and
                  Ipek Oguz and
                  Gozde B. Unal and
                  Tom Vercauteren},
  title        = {Weakly Supervised Deep Nuclei Segmentation using Points Annotation
                  in Histopathology Images},
  booktitle    = {International Conference on Medical Imaging with Deep Learning, {MIDL}
                  2019, 8-10 July 2019, London, United Kingdom},
  series       = {Proceedings of Machine Learning Research},
  volume       = {102},
  pages        = {390--400},
  publisher    = {{PMLR}},
  year         = {2019},
  url          = {http://proceedings.mlr.press/v102/qu19a.html},
  timestamp    = {Mon, 08 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/midl/QuWHYRDM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-09140,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Qiaoying Huang and
                  Hui Qu and
                  Bo Liu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding
                  Boxes},
  journal      = {CoRR},
  volume       = {abs/1907.09140},
  year         = {2019},
  url          = {http://arxiv.org/abs/1907.09140},
  eprinttype    = {arXiv},
  eprint       = {1907.09140},
  timestamp    = {Tue, 30 Jul 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1907-09140.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1909-12456,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Dimitris N. Metaxas},
  title        = {{ASSD:} Attentive Single Shot Multibox Detector},
  journal      = {CoRR},
  volume       = {abs/1909.12456},
  year         = {2019},
  url          = {http://arxiv.org/abs/1909.12456},
  eprinttype    = {arXiv},
  eprint       = {1909.12456},
  timestamp    = {Wed, 02 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1909-12456.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-09199,
  author       = {Jingru Yi and
                  Hui Tang and
                  Pengxiang Wu and
                  Bo Liu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas and
                  Lianyi Han and
                  Wei Fan},
  title        = {Object-Guided Instance Segmentation for Biological Images},
  journal      = {CoRR},
  volume       = {abs/1911.09199},
  year         = {2019},
  url          = {http://arxiv.org/abs/1911.09199},
  eprinttype    = {arXiv},
  eprint       = {1911.09199},
  timestamp    = {Wed, 27 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1911-09199.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-10729,
  author       = {Pengxiang Wu and
                  Chao Chen and
                  Jingru Yi and
                  Dimitris N. Metaxas},
  title        = {Point Cloud Processing via Recurrent Set Encoding},
  journal      = {CoRR},
  volume       = {abs/1911.10729},
  year         = {2019},
  url          = {http://arxiv.org/abs/1911.10729},
  eprinttype    = {arXiv},
  eprint       = {1911.10729},
  timestamp    = {Tue, 03 Dec 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1911-10729.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccv/YiWJHM18,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Menglin Jiang and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  editor       = {Laura Leal{-}Taix{\'{e}} and
                  Stefan Roth},
  title        = {Instance Segmentation of Neural Cells},
  booktitle    = {Computer Vision - {ECCV} 2018 Workshops - Munich, Germany, September
                  8-14, 2018, Proceedings, Part {VI}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11134},
  pages        = {395--402},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-11024-6\_29},
  doi          = {10.1007/978-3-030-11024-6\_29},
  timestamp    = {Tue, 14 May 2019 10:00:45 +0200},
  biburl       = {https://dblp.org/rec/conf/eccv/YiWJHM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/YiWHM18,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Pixel-wise neural cell instance segmentation},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {373--377},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363596},
  doi          = {10.1109/ISBI.2018.8363596},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/YiWHM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1810-08229,
  author       = {Qiaoying Huang and
                  Dong Yang and
                  Pengxiang Wu and
                  Hui Qu and
                  Jingru Yi and
                  Dimitris N. Metaxas},
  title        = {{MRI} Reconstruction via Cascaded Channel-wise Attention Network},
  journal      = {CoRR},
  volume       = {abs/1810.08229},
  year         = {2018},
  url          = {http://arxiv.org/abs/1810.08229},
  eprinttype    = {arXiv},
  eprint       = {1810.08229},
  timestamp    = {Fri, 02 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1810-08229.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijon/TanLYYWYEM17,
  author       = {Chaowei Tan and
                  Kang Li and
                  Zhennan Yan and
                  Jingru Yi and
                  Pengxiang Wu and
                  Hui Jing Yu and
                  Klaus Engelke and
                  Dimitris N. Metaxas},
  title        = {Towards large-scale {MR} thigh image analysis via an integrated quantification
                  framework},
  journal      = {Neurocomputing},
  volume       = {229},
  pages        = {63--76},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.neucom.2016.05.108},
  doi          = {10.1016/J.NEUCOM.2016.05.108},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijon/TanLYYWYEM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/YiWHM17,
  author       = {Jingru Yi and
                  Pengxiang Wu and
                  Daniel J. Hoeppner and
                  Dimitris N. Metaxas},
  title        = {Fast Neural Cell Detection Using Light-Weight {SSD} Neural Network},
  booktitle    = {2017 {IEEE} Conference on Computer Vision and Pattern Recognition
                  Workshops, {CVPR} Workshops 2017, Honolulu, HI, USA, July 21-26, 2017},
  pages        = {860--864},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/CVPRW.2017.119},
  doi          = {10.1109/CVPRW.2017.119},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cvpr/YiWHM17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tbe/WuYZHQG15,
  author       = {Pengxiang Wu and
                  Jingru Yi and
                  Gang Zhao and
                  Zhangjin Huang and
                  Bensheng Qiu and
                  Dayong Gao},
  title        = {Active Contour-Based Cell Segmentation During Freezing and Its Application
                  in Cryopreservation},
  journal      = {{IEEE} Trans. Biomed. Eng.},
  volume       = {62},
  number       = {1},
  pages        = {284--295},
  year         = {2015},
  url          = {https://doi.org/10.1109/TBME.2014.2350011},
  doi          = {10.1109/TBME.2014.2350011},
  timestamp    = {Wed, 02 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tbe/WuYZHQG15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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