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ORCIDBibTeX records: Cui Tao
@article{DBLP:journals/biomedsem/LiLPGSLHT24,
author = {Jianfu Li and
Yiming Li and
Yuanyi Pan and
Jinjing Guo and
Zenan Sun and
Fang Li and
Yongqun He and
Cui Tao},
title = {Mapping vaccine names in clinical trials to vaccine ontology using
cascaded fine-tuned domain-specific language models},
journal = {J. Biomed. Semant.},
volume = {15},
number = {1},
pages = {14},
year = {2024},
url = {https://doi.org/10.1186/s13326-024-00318-x},
doi = {10.1186/S13326-024-00318-X},
timestamp = {Sun, 18 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/LiLPGSLHT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/LiWHLHCHDKYDRTJZX24,
author = {Zhao Li and
Qiang Wei and
Liang{-}Chin Huang and
Jianfu Li and
Yan Hu and
Yao{-}Shun Chuang and
Jianping He and
Avisha Das and
Vipina Kuttichi Keloth and
Yuntao Yang and
Chiamaka S. Diala and
Kirk E. Roberts and
Cui Tao and
Xiaoqian Jiang and
W. Jim Zheng and
Hua Xu},
title = {Ensemble pretrained language models to extract biomedical knowledge
from literature},
journal = {J. Am. Medical Informatics Assoc.},
volume = {31},
number = {9},
pages = {1904--1911},
year = {2024},
url = {https://doi.org/10.1093/jamia/ocae061},
doi = {10.1093/JAMIA/OCAE061},
timestamp = {Fri, 20 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/LiWHLHCHDKYDRTJZX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/LiZLDYLSHWAMLYHYFLHTDLL24,
author = {Yiming Li and
Jeff Zhao and
Manqi Li and
Yifang Dang and
Evan Yu and
Jianfu Li and
Zenan Sun and
Usama Hussein and
Jianguo Wen and
Ahmed M. Abdelhameed and
Junhua Mai and
Shenduo Li and
Yue Yu and
Xinyue Hu and
Daowei Yang and
Jingna Feng and
Zehan Li and
Jianping He and
Wei Tao and
Tiehang Duan and
Yanyan Lou and
Fang Li and
Cui Tao},
title = {RefAI: a GPT-powered retrieval-augmented generative tool for biomedical
literature recommendation and summarization},
journal = {J. Am. Medical Informatics Assoc.},
volume = {31},
number = {9},
pages = {2030--2039},
year = {2024},
url = {https://doi.org/10.1093/jamia/ocae129},
doi = {10.1093/JAMIA/OCAE129},
timestamp = {Fri, 20 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/LiZLDYLSHWAMLYHYFLHTDLL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/LiTLSLFXT24,
author = {Yiming Li and
Wei Tao and
Zehan Li and
Zenan Sun and
Fang Li and
Susan H. Fenton and
Hua Xu and
Cui Tao},
title = {Artificial intelligence-powered pharmacovigilance: {A} review of machine
and deep learning in clinical text-based adverse drug event detection
for benchmark datasets},
journal = {J. Biomed. Informatics},
volume = {152},
pages = {104621},
year = {2024},
url = {https://doi.org/10.1016/j.jbi.2024.104621},
doi = {10.1016/J.JBI.2024.104621},
timestamp = {Fri, 31 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/LiTLSLFXT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/FuJVKDZGPSMWWLXTFLS24,
author = {Sunyang Fu and
Heling Jia and
Maria Vassilaki and
Vipina Kuttichi Keloth and
Yifang Dang and
Yujia Zhou and
Muskan Garg and
Ronald C. Petersen and
Jennifer St Sauver and
Sungrim Moon and
Liwei Wang and
Andrew Wen and
Fang Li and
Hua Xu and
Cui Tao and
Jungwei Fan and
Hongfang Liu and
Sunghwan Sohn},
title = {FedFSA: Hybrid and federated framework for functional status ascertainment
across institutions},
journal = {J. Biomed. Informatics},
volume = {152},
pages = {104623},
year = {2024},
url = {https://doi.org/10.1016/j.jbi.2024.104623},
doi = {10.1016/J.JBI.2024.104623},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/FuJVKDZGPSMWWLXTFLS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jhir/HeLLHNXWWLXT24,
author = {Jianping He and
Fang Li and
Jianfu Li and
Xinyue Hu and
Yi Nian and
Yang Xiang and
Jingqi Wang and
Qiang Wei and
Yiming Li and
Hua Xu and
Cui Tao},
title = {Prompt Tuning in Biomedical Relation Extraction},
journal = {J. Heal. Informatics Res.},
volume = {8},
number = {2},
pages = {206--224},
year = {2024},
url = {https://doi.org/10.1007/s41666-024-00162-9},
doi = {10.1007/S41666-024-00162-9},
timestamp = {Thu, 02 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jhir/HeLLHNXWWLXT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/SankaranarayanapillaiWJST24,
author = {Madhuri Sankaranarayanapillai and
Su Wang and
Hangyu Ji and
Hsing{-}yi Song and
Cui Tao},
title = {Lessons learned from annotation of {VAERS} reports on adverse events
following influenza vaccination and related to Guillain-Barr{\'{e}}
syndrome},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23-S},
number = {4},
pages = {298},
year = {2024},
url = {https://doi.org/10.1186/s12911-023-02374-2},
doi = {10.1186/S12911-023-02374-2},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/SankaranarayanapillaiWJST24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ZhangFLDTHCT24,
author = {Xinyuan Zhang and
Yixue Feng and
Fang Li and
Jin Ding and
Danyal Tahseen and
Ezekiel Hinojosa and
Yong Chen and
Cui Tao},
title = {Evaluating MedDRA-to-ICD terminology mappings},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23-S},
number = {4},
pages = {299},
year = {2024},
url = {https://doi.org/10.1186/s12911-023-02375-1},
doi = {10.1186/S12911-023-02375-1},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/ZhangFLDTHCT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nn/DuanWLDAYT24,
author = {Tiehang Duan and
Zhenyi Wang and
Fang Li and
Gianfranco Doretto and
Donald A. Adjeroh and
Yiyi Yin and
Cui Tao},
title = {Online continual decoding of streaming {EEG} signal with a balanced
and informative memory buffer},
journal = {Neural Networks},
volume = {176},
pages = {106338},
year = {2024},
url = {https://doi.org/10.1016/j.neunet.2024.106338},
doi = {10.1016/J.NEUNET.2024.106338},
timestamp = {Fri, 19 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nn/DuanWLDAYT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/chi/MooreANHTST24,
author = {Nicole Moore and
Muhammad Amith and
Ana Neumann and
Jane Hamilton and
Lu Tang and
Lara S. Savas and
Cui Tao},
editor = {Florian 'Floyd' Mueller and
Penny Kyburz and
Julie R. Williamson and
Corina Sas},
title = {Translating motivational interviewing for the {HPV} vaccine into a
computable ontology model for automated {AI} conversational interaction},
booktitle = {Extended Abstracts of the {CHI} Conference on Human Factors in Computing
Systems, {CHI} {EA} 2024, Honolulu, HI, USA, May 11-16, 2024},
pages = {341:1--341:12},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3613905.3651051},
doi = {10.1145/3613905.3651051},
timestamp = {Fri, 17 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/chi/MooreANHTST24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/smartnets/HasanZSWL0T24,
author = {Wordh Ul Hasan and
Kimia Tuz Zaman and
Mohammed Shalan and
Xin Wang and
Juan Li and
Bo Xie and
Cui Tao},
title = {CareCompanion: {A} Personalized Virtual Assistant for Enhancing Support
and Independence in {ADRD} Patients and Older Adults},
booktitle = {International Conference on Smart Applications, Communications and
Networking, SmartNets 2024, Harrisonburg, VA, USA, May 28-30, 2024},
pages = {1--10},
publisher = {{IEEE}},
year = {2024},
url = {https://doi.org/10.1109/SmartNets61466.2024.10577734},
doi = {10.1109/SMARTNETS61466.2024.10577734},
timestamp = {Thu, 08 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/smartnets/HasanZSWL0T24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-19432,
author = {Song Wang and
Yiliang Zhou and
Ziqiang Han and
Cui Tao and
Yunyu Xiao and
Ying Ding and
Joydeep Ghosh and
Yifan Peng},
title = {Uncovering Misattributed Suicide Causes through Annotation Inconsistency
Detection in Death Investigation Notes},
journal = {CoRR},
volume = {abs/2403.19432},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.19432},
doi = {10.48550/ARXIV.2403.19432},
eprinttype = {arXiv},
eprint = {2403.19432},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-19432.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2404-05415,
author = {Yiming Li and
Xueqing Peng and
Jianfu Li and
Xu Zuo and
Suyuan Peng and
Donghong Pei and
Cui Tao and
Hua Xu and
Na Hong},
title = {Relation Extraction Using Large Language Models: {A} Case Study on
Acupuncture Point Locations},
journal = {CoRR},
volume = {abs/2404.05415},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2404.05415},
doi = {10.48550/ARXIV.2404.05415},
eprinttype = {arXiv},
eprint = {2404.05415},
timestamp = {Wed, 15 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2404-05415.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2406-18049,
author = {Yiming Li and
Deepthi Viswaroopan and
William He and
Jianfu Li and
Xu Zuo and
Hua Xu and
Cui Tao},
title = {Improving Entity Recognition Using Ensembles of Deep Learning and
Fine-tuned Large Language Models: {A} Case Study on Adverse Event
Extraction from Multiple Sources},
journal = {CoRR},
volume = {abs/2406.18049},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2406.18049},
doi = {10.48550/ARXIV.2406.18049},
eprinttype = {arXiv},
eprint = {2406.18049},
timestamp = {Mon, 22 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2406-18049.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangSDXMHSPT23,
author = {Meng Zhang and
Madhuri Sankaranarayanapillai and
Jingcheng Du and
Yang Xiang and
Frank J. Manion and
Marcelline R. Harris and
Cooper Stansbury and
Huy Anh Pham and
Cui Tao},
title = {Machine learning-based donor permission extraction from informed consent
documents},
journal = {{BMC} Bioinform.},
volume = {24},
number = {1},
pages = {477},
year = {2023},
url = {https://doi.org/10.1186/s12859-023-05568-7},
doi = {10.1186/S12859-023-05568-7},
timestamp = {Sun, 31 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangSDXMHSPT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WangDSDPTXP23,
author = {Song Wang and
Yifang Dang and
Zhaoyi Sun and
Ying Ding and
Jyotishman Pathak and
Cui Tao and
Yunyu Xiao and
Yifan Peng},
title = {An {NLP} approach to identify SDoH-related circumstance and suicide
crisis from death investigation narratives},
journal = {J. Am. Medical Informatics Assoc.},
volume = {30},
number = {8},
pages = {1408--1417},
year = {2023},
url = {https://doi.org/10.1093/jamia/ocad068},
doi = {10.1093/JAMIA/OCAD068},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/WangDSDPTXP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/DangLHKZFAFDYLJXT23,
author = {Yifang Dang and
Fang Li and
Xinyue Hu and
Vipina Kuttichi Keloth and
Meng Zhang and
Sunyang Fu and
Muhammad F. Amith and
J. Wilfred Fan and
Jingcheng Du and
Evan Yu and
Hongfang Liu and
Xiaoqian Jiang and
Hua Xu and
Cui Tao},
title = {Systematic design and data-driven evaluation of social determinants
of health ontology (SDoHO)},
journal = {J. Am. Medical Informatics Assoc.},
volume = {30},
number = {9},
pages = {1465--1473},
year = {2023},
url = {https://doi.org/10.1093/jamia/ocad096},
doi = {10.1093/JAMIA/OCAD096},
timestamp = {Wed, 30 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/DangLHKZFAFDYLJXT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/HaoLZTSC23,
author = {Xubing Hao and
Xiaojin Li and
Guo{-}Qiang Zhang and
Cui Tao and
Paul E. Schulz and
Licong Cui},
title = {An ontology-based approach for harmonization and cross-cohort query
of Alzheimer's disease data resources},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23},
number = {1},
pages = {151},
year = {2023},
url = {https://doi.org/10.1186/s12911-023-02250-z},
doi = {10.1186/S12911-023-02250-Z},
timestamp = {Fri, 02 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/HaoLZTSC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ZhangLAWLST23,
author = {Xinyuan Zhang and
Rebecca Z. Lin and
Muhammad Tuan Amith and
Cynthia Wang and
Jeremy Light and
John Strickley and
Cui Tao},
title = {{DEVO:} an ontology to assist with dermoscopic feature standardization},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23-S},
number = {1},
pages = {162},
year = {2023},
url = {https://doi.org/10.1186/s12911-023-02251-y},
doi = {10.1186/S12911-023-02251-Y},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/ZhangLAWLST23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/DuanWDLTA23,
author = {Tiehang Duan and
Zhenyi Wang and
Gianfranco Doretto and
Fang Li and
Cui Tao and
Donald A. Adjeroh},
editor = {Xingpeng Jiang and
Haiying Wang and
Reda Alhajj and
Xiaohua Hu and
Felix Engel and
Mufti Mahmud and
Nadia Pisanti and
Xuefeng Cui and
Hong Song},
title = {Replay with Stochastic Neural Transformation for Online Continual
{EEG} Classification},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2023, Istanbul, Turkiye, December 5-8, 2023},
pages = {1874--1879},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/BIBM58861.2023.10385807},
doi = {10.1109/BIBM58861.2023.10385807},
timestamp = {Thu, 14 Mar 2024 16:59:09 +0100},
biburl = {https://dblp.org/rec/conf/bibm/DuanWDLTA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/DuanWDLTA23,
author = {Tiehang Duan and
Zhenyi Wang and
Gianfranco Doretto and
Fang Li and
Cui Tao and
Donald A. Adjeroh},
editor = {Kobi Gal and
Ann Now{\'{e}} and
Grzegorz J. Nalepa and
Roy Fairstein and
Roxana Radulescu},
title = {Distributionally Robust Cross Subject {EEG} Decoding},
booktitle = {{ECAI} 2023 - 26th European Conference on Artificial Intelligence,
September 30 - October 4, 2023, Krak{\'{o}}w, Poland - Including
12th Conference on Prestigious Applications of Intelligent Systems
{(PAIS} 2023)},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {372},
pages = {575--582},
publisher = {{IOS} Press},
year = {2023},
url = {https://doi.org/10.3233/FAIA230318},
doi = {10.3233/FAIA230318},
timestamp = {Wed, 18 Oct 2023 09:31:16 +0200},
biburl = {https://dblp.org/rec/conf/ecai/DuanWDLTA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/AguilarATHSRKT23,
author = {Chloe Aguilar and
Muhammad Amith and
Lu Tang and
Jane Hamilton and
Lara S. Savas and
Danniel Rhee and
Tazrin Khan and
Cui Tao},
editor = {Vincent G. Duffy},
title = {Evaluating Domain-Independent Small Talk Conversations to Improve
Clinical Communication Interaction for Human and Machine},
booktitle = {Digital Human Modeling and Applications in Health, Safety, Ergonomics
and Risk Management - 14th International Conference, {DHM} 2023, Held
as Part of the 25th {HCI} International Conference, {HCII} 2023, Copenhagen,
Denmark, July 23-28, 2023, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14028},
pages = {330--343},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-35741-1\_25},
doi = {10.1007/978-3-031-35741-1\_25},
timestamp = {Fri, 21 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hci/AguilarATHSRKT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpcc/WangH0HD0T23,
author = {Xin Wang and
Wordh Ul Hasan and
Juan Li and
Rasha Hendawi and
Yang Du and
Bo Xie and
Cui Tao},
title = {Empowering Personalized Health Data Queries with Knowledge Graph and
GPT-Enhanced Voice Assistant},
booktitle = {{IEEE} International Conference on High Performance Computing {\&}
Communications, Data Science {\&} Systems, Smart City {\&}
Dependability in Sensor, Cloud {\&} Big Data Systems {\&}
Application, HPCC/DSS/SmartCity/DependSys 2023, Melbourne, Australia,
December 17-21, 2023},
pages = {1035--1042},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/HPCC-DSS-SmartCity-DependSys60770.2023.00149},
doi = {10.1109/HPCC-DSS-SMARTCITY-DEPENDSYS60770.2023.00149},
timestamp = {Wed, 10 Apr 2024 17:07:58 +0200},
biburl = {https://dblp.org/rec/conf/hpcc/WangH0HD0T23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/LiPLPPTXH23,
author = {Yiming Li and
Xueqing Peng and
Jianfu Li and
Suyuan Peng and
Donghong Pei and
Cui Tao and
Hua Xu and
Na Hong},
title = {Development of a Natural Language Processing Tool to Extract Acupuncture
Point Location Terms},
booktitle = {11th {IEEE} International Conference on Healthcare Informatics, {ICHI}
2023, Houston, TX, USA, June 26-29, 2023},
pages = {344--351},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ICHI57859.2023.00053},
doi = {10.1109/ICHI57859.2023.00053},
timestamp = {Wed, 17 Jan 2024 17:11:28 +0100},
biburl = {https://dblp.org/rec/conf/ichi/LiPLPPTXH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/LiAHATSX23,
author = {Zehan Li and
Iqra Ameer and
Yan Hu and
Ahmed Abdelhameed and
Cui Tao and
Salih Selek and
Hua Xu},
title = {Suicide Tendency Prediction from Psychiatric Notes Using Transformer
Models},
booktitle = {11th {IEEE} International Conference on Healthcare Informatics, {ICHI}
2023, Houston, TX, USA, June 26-29, 2023},
pages = {481--483},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ICHI57859.2023.00074},
doi = {10.1109/ICHI57859.2023.00074},
timestamp = {Wed, 17 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/LiAHATSX23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/SunT23,
author = {Zenan Sun and
Cui Tao},
title = {Named Entity Recognition and Normalization for Alzheimer's Disease
Eligibility Criteria},
booktitle = {11th {IEEE} International Conference on Healthcare Informatics, {ICHI}
2023, Houston, TX, USA, June 26-29, 2023},
pages = {558--564},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ICHI57859.2023.00100},
doi = {10.1109/ICHI57859.2023.00100},
timestamp = {Wed, 17 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/SunT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iscc/HasanLALPZKT23,
author = {Wordh Ul Hasan and
Juan Li and
Shadi Alian and
Tianyi Liang and
Vikram Pandey and
Kimia Tuz Zaman and
Jun Kong and
Cui Tao},
title = {Honoring Heritage, Managing Health: {A} Mobile Diabetes Self-Management
App for Native Americans with Cultural Sensitivity and Local Factors},
booktitle = {{IEEE} Symposium on Computers and Communications, {ISCC} 2023, Gammarth,
Tunisia, July 9-12, 2023},
pages = {1--6},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ISCC58397.2023.10218192},
doi = {10.1109/ISCC58397.2023.10218192},
timestamp = {Wed, 06 Sep 2023 08:09:43 +0200},
biburl = {https://dblp.org/rec/conf/iscc/HasanLALPZKT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iscc/ZamanHLT23,
author = {Kimia Tuz Zaman and
Wordh Ul Hasan and
Juan Li and
Cui Tao},
title = {Empowering Caregivers of Alzheimer's Disease and Related Dementias
{(ADRD)} with a GPT-Powered Voice Assistant: Leveraging Peer Insights
from Social Media},
booktitle = {{IEEE} Symposium on Computers and Communications, {ISCC} 2023, Gammarth,
Tunisia, July 9-12, 2023},
pages = {1--7},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ISCC58397.2023.10218142},
doi = {10.1109/ISCC58397.2023.10218142},
timestamp = {Tue, 02 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iscc/ZamanHLT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/www/AmithCRT23,
author = {Muhammad Amith and
Licong Cui and
Kirk Roberts and
Cui Tao},
editor = {Ying Ding and
Jie Tang and
Juan F. Sequeda and
Lora Aroyo and
Carlos Castillo and
Geert{-}Jan Houben},
title = {Application of an ontology for model cards to generate computable
artifacts for linking machine learning information from biomedical
research},
booktitle = {Companion Proceedings of the {ACM} Web Conference 2023, {WWW} 2023,
Austin, TX, USA, 30 April 2023 - 4 May 2023},
pages = {820--825},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3543873.3587601},
doi = {10.1145/3543873.3587601},
timestamp = {Mon, 28 Aug 2023 21:17:11 +0200},
biburl = {https://dblp.org/rec/conf/www/AmithCRT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-11991,
author = {Muhammad Amith and
Licong Cui and
Kirk Roberts and
Cui Tao},
title = {Application of an ontology for model cards to generate computable
artifacts for linking machine learning information from biomedical
research},
journal = {CoRR},
volume = {abs/2303.11991},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2303.11991},
doi = {10.48550/ARXIV.2303.11991},
eprinttype = {arXiv},
eprint = {2303.11991},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2303-11991.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2306-10456,
author = {Fang Li and
Yi Nian and
Zenan Sun and
Cui Tao},
title = {Advancing Biomedicine with Graph Representation Learning: Recent Progress,
Challenges, and Future Directions},
journal = {CoRR},
volume = {abs/2306.10456},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2306.10456},
doi = {10.48550/ARXIV.2306.10456},
eprinttype = {arXiv},
eprint = {2306.10456},
timestamp = {Thu, 22 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2306-10456.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-11651,
author = {Tiehang Duan and
Zhenyi Wang and
Gianfranco Doretto and
Fang Li and
Cui Tao and
Donald A. Adjeroh},
title = {Distributionally Robust Cross Subject {EEG} Decoding},
journal = {CoRR},
volume = {abs/2308.11651},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.11651},
doi = {10.48550/ARXIV.2308.11651},
eprinttype = {arXiv},
eprint = {2308.11651},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-11651.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-06584,
author = {Xinyue Hu and
Zenan Sun and
Yi Nian and
Yifang Dang and
Fang Li and
Jingna Feng and
Evan Yu and
Cui Tao},
title = {Explainable Graph Neural Network for Alzheimer's Disease And Related
Dementias Risk Prediction},
journal = {CoRR},
volume = {abs/2309.06584},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2309.06584},
doi = {10.48550/ARXIV.2309.06584},
eprinttype = {arXiv},
eprint = {2309.06584},
timestamp = {Tue, 19 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2309-06584.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-16150,
author = {Yiming Li and
Jianfu Li and
Jianping He and
Cui Tao},
title = {{AE-GPT:} Using Large Language Models to Extract Adverse Events from
Surveillance Reports-A Use Case with Influenza Vaccine Adverse Events},
journal = {CoRR},
volume = {abs/2309.16150},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2309.16150},
doi = {10.48550/ARXIV.2309.16150},
eprinttype = {arXiv},
eprint = {2309.16150},
timestamp = {Sat, 30 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2309-16150.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ManuelAHTC22,
author = {Warren Manuel and
Rashmie Abeysinghe and
Yongqun He and
Cui Tao and
Licong Cui},
title = {Identification of missing hierarchical relations in the vaccine ontology
using acquired term pairs},
journal = {J. Biomed. Semant.},
volume = {13},
number = {1},
pages = {22},
year = {2022},
url = {https://doi.org/10.1186/s13326-022-00276-2},
doi = {10.1186/S13326-022-00276-2},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ManuelAHTC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AmithCZRJLYT22,
author = {Muhammad Tuan Amith and
Licong Cui and
Degui Zhi and
Kirk Roberts and
Xiaoqian Jiang and
Fang Li and
Evan Yu and
Cui Tao},
title = {Toward a standard formal semantic representation of the model card
report},
journal = {{BMC} Bioinform.},
volume = {23},
number = {1},
pages = {281},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04797-6},
doi = {10.1186/S12859-022-04797-6},
timestamp = {Mon, 08 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AmithCZRJLYT22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NianHZFDLBZCT22,
author = {Yi Nian and
Xinyue Hu and
Rui Zhang and
Jingna Feng and
Jingcheng Du and
Fang Li and
Larry Bu and
Yuji Zhang and
Yong Chen and
Cui Tao},
title = {Mining on Alzheimer's diseases related knowledge graph to identity
potential AD-related semantic triples for drug repurposing},
journal = {{BMC} Bioinform.},
volume = {23-S},
number = {6},
pages = {407},
year = {2022},
url = {https://doi.org/10.1186/s12859-022-04934-1},
doi = {10.1186/S12859-022-04934-1},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NianHZFDLBZCT22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Musen0CPT22,
author = {Mark A. Musen and
Jiang Bian and
Bruce Chorpita and
Vimla Patel and
Cui Tao},
title = {Ontologies in the Behavioral Sciences: Accelerating Research and the
Accessibility and Use of Knowledge},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f005-1.4642489/f005-1.4642490/46-1.4642527/1043-1.4642524},
timestamp = {Wed, 17 Apr 2024 11:46:45 +0200},
biburl = {https://dblp.org/rec/conf/amia/Musen0CPT22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/YuTDZ0FLS22,
author = {Evan Yu and
Cui Tao and
Jingcheng Du and
Degui Zhi and
Yang Xiang and
Kayo Fujimoto and
Xi Luo and
John A. Schneider},
title = {Combining Transfer Learning with Graph Attention Models for {HIV}
Risk Prediction},
booktitle = {{AMIA} 2022, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 5-9, 2022},
publisher = {{AMIA}},
year = {2022},
url = {https://knowledge.amia.org/76677-amia-1.4637602/f008-1.4640715/f008-1.4640716/1030-1.4640744/1167-1.4640741},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/YuTDZ0FLS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/HeLHLNWXWXT22,
author = {Jianping He and
Fang Li and
Xinyue Hu and
Jianfu Li and
Yi Nian and
Jingqi Wang and
Yang Xiang and
Qiang Wei and
Hua Xu and
Cui Tao},
title = {Chemical-Protein Relation Extraction with Pre-trained Prompt Tuning},
booktitle = {10th {IEEE} International Conference on Healthcare Informatics, {ICHI}
2022, Rochester, MN, USA, June 11-14, 2022},
pages = {608--609},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/ICHI54592.2022.00120},
doi = {10.1109/ICHI54592.2022.00120},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ichi/HeLHLNWXWXT22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2202-08712,
author = {Yi Nian and
Xinyue Hu and
Rui Zhang and
Jingna Feng and
Jingcheng Du and
Fang Li and
Yong Chen and
Cui Tao},
title = {Mining On Alzheimer's Diseases Related Knowledge Graph to Identity
Potential AD-related Semantic Triples for Drug Repurposing},
journal = {CoRR},
volume = {abs/2202.08712},
year = {2022},
url = {https://arxiv.org/abs/2202.08712},
eprinttype = {arXiv},
eprint = {2202.08712},
timestamp = {Tue, 01 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2202-08712.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2212-01941,
author = {Yifang Dang and
Fang Li and
Xinyue Hu and
Vipina Kuttichi Keloth and
Meng Zhang and
Sunyang Fu and
Jingcheng Du and
J. Wilfred Fan and
Muhammad F. Amith and
Evan Yu and
Hongfang Liu and
Xiaoqian Jiang and
Hua Xu and
Cui Tao},
title = {Systematic Design and Evaluation of Social Determinants of Health
Ontology (SDoHO)},
journal = {CoRR},
volume = {abs/2212.01941},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2212.01941},
doi = {10.48550/ARXIV.2212.01941},
eprinttype = {arXiv},
eprint = {2212.01941},
timestamp = {Wed, 30 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2212-01941.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Du0SZWSP00T21,
author = {Jingcheng Du and
Yang Xiang and
Madhuri Sankaranarayanapillai and
Meng Zhang and
Jingqi Wang and
Yuqi Si and
Huy Anh Pham and
Hua Xu and
Yong Chen and
Cui Tao},
title = {Extracting postmarketing adverse events from safety reports in the
vaccine adverse event reporting system {(VAERS)} using deep learning},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {7},
pages = {1393--1400},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocab014},
doi = {10.1093/JAMIA/OCAB014},
timestamp = {Wed, 07 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/Du0SZWSP00T21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/DuWWR0JT21,
author = {Jingcheng Du and
Qing Wang and
Jingqi Wang and
Prerana Ramesh and
Yang Xiang and
Xiaoqian Jiang and
Cui Tao},
title = {{COVID-19} trial graph: a linked graph for {COVID-19} clinical trials},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {9},
pages = {1964--1969},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocab078},
doi = {10.1093/JAMIA/OCAB078},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/DuWWR0JT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/AmithOLXT21,
author = {Muhammad Amith and
Chidinma Onye and
Tracey Ledoux and
Grace Xiong and
Cui Tao},
title = {The ontology of fast food facts: conceptualization of nutritional
fast food data for consumers and semantic web applications},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21-S},
number = {7},
pages = {275},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01636-1},
doi = {10.1186/S12911-021-01636-1},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/AmithOLXT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/Rasmy0XTZ21,
author = {Laila Rasmy and
Yang Xiang and
Ziqian Xie and
Cui Tao and
Degui Zhi},
title = {Med-BERT: pretrained contextualized embeddings on large-scale structured
electronic health records for disease prediction},
journal = {npj Digit. Medicine},
volume = {4},
year = {2021},
url = {https://doi.org/10.1038/s41746-021-00455-y},
doi = {10.1038/S41746-021-00455-Y},
timestamp = {Sat, 08 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/Rasmy0XTZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AmithHSFMT21,
author = {Muhammad Amith and
Marcelline R. Harris and
Cooper Stansbury and
Kathleen Ford and
Frank J. Manion and
Cui Tao},
title = {Expressing and Executing Informed Consent Permissions using {SWRL:}
The All of Us Use Case},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t003-1.4626466/t003-1.4626467/3576764-1.4626807/3576591-1.4626804},
timestamp = {Wed, 17 Apr 2024 11:46:53 +0200},
biburl = {https://dblp.org/rec/conf/amia/AmithHSFMT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/StoneLLWZRABPWT21,
author = {Daniel J. Stone and
Sijia Liu and
Yuan Luo and
Andrew Wen and
Nansu Zong and
Luke V. Rasmussen and
Prakash Adekkanattu and
Pascal S. Brandt and
Jennifer A. Pacheco and
Fei Wang and
Cui Tao and
Jyotishman Pathak and
Hongfang Liu and
Guoqian Jiang},
title = {FHIRTime: Standardizing Temporal Patterns Identified from Clinical
Narratives Using {HL7} {FHIR}},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577460-1.4626100/3576929-1.4626097},
timestamp = {Wed, 07 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/StoneLLWZRABPWT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZhaoYLHDT0PVYW021,
author = {Yunpeng Zhao and
Pengfei Yin and
Yongqiu Li and
Xing He and
Jingcheng Du and
Cui Tao and
Yi Guo and
Mattia Prosperi and
Pierangelo Veltri and
Xi Yang and
Yonghui Wu and
Jiang Bian},
title = {Data and Model Biases in Social Media Analyses: {A} Case Study of
{COVID-19} Tweets},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t003-1.4626466/t003-1.4626467/3576524-1.4626474/3577200-1.4626471},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZhaoYLHDT0PVYW021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LinA0WLST21,
author = {Rebecca Z. Lin and
Muhammad Tuan Amith and
Xinyuan Zhang and
Cynthia Wang and
Jeremy Light and
John Strickley and
Cui Tao},
editor = {Yufei Huang and
Lukasz A. Kurgan and
Feng Luo and
Xiaohua Hu and
Yidong Chen and
Edward R. Dougherty and
Andrzej Kloczkowski and
Yaohang Li},
title = {Developing Ontologies to Standardize Descriptions of Visual and Dermoscopic
Elements},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2021, Houston, TX, USA, December 9-12, 2021},
pages = {1813--1817},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/BIBM52615.2021.9669477},
doi = {10.1109/BIBM52615.2021.9669477},
timestamp = {Tue, 20 Aug 2024 07:54:45 +0200},
biburl = {https://dblp.org/rec/conf/bibm/LinA0WLST21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/NgantchaARVWT21,
author = {Patricia Ngantcha and
Muhammad Tuan Amith and
Kirk Roberts and
John A. Valenza and
Muhammad Walji and
Cui Tao},
editor = {Yufei Huang and
Lukasz A. Kurgan and
Feng Luo and
Xiaohua Hu and
Yidong Chen and
Edward R. Dougherty and
Andrzej Kloczkowski and
Yaohang Li},
title = {Dental EHR-infused Persona Ontologies to Enrich Dental Dialogue Interaction
of Agents},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2021, Houston, TX, USA, December 9-12, 2021},
pages = {1818--1825},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/BIBM52615.2021.9669748},
doi = {10.1109/BIBM52615.2021.9669748},
timestamp = {Wed, 23 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/NgantchaARVWT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/ZhuATCXBT21,
author = {Anna Zhu and
Muhammad Amith and
Lu Tang and
Rachel Cunningham and
Angela Xu and
Julie A. Boom and
Cui Tao},
editor = {Constantine Stephanidis and
Vincent G. Duffy and
Heidi Kr{\"{o}}mker and
Fiona Fui{-}Hoon Nah and
Keng Siau and
Gavriel Salvendy and
June Wei},
title = {Experimenting with a Prototype Interactive Narrative Game to Improve
Knowledge and Beliefs for the {HPV} Vaccine},
booktitle = {{HCI} International 2021 - Late Breaking Papers: {HCI} Applications
in Health, Transport, and Industry - 23rd {HCI} International Conference,
{HCII} 2021, Virtual Event, July 24-29, 2021 Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13097},
pages = {186--201},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-90966-6\_14},
doi = {10.1007/978-3-030-90966-6\_14},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hci/ZhuATCXBT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/NgantchaATR21,
author = {Patricia Ngantcha and
Muhammad Amith and
Cui Tao and
Kirk Roberts},
editor = {Vincent G. Duffy},
title = {Patient-Provider Communication Training Models for Interactive Speech
Devices},
booktitle = {Digital Human Modeling and Applications in Health, Safety, Ergonomics
and Risk Management. Human Body, Motion and Behavior - 12th International
Conference, {DHM} 2021, Held as Part of the 23rd {HCI} International
Conference, {HCII} 2021, Virtual Event, July 24-29, 2021, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {12777},
pages = {250--268},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-77817-0\_19},
doi = {10.1007/978-3-030-77817-0\_19},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hci/NgantchaATR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/WangDTT21,
author = {Samuel Wang and
Jingcheng Du and
Lu Tang and
Cui Tao},
editor = {Paula Otero and
Philip Scott and
Susan Z. Martin and
Elaine Huesing},
title = {Understanding Public Perceptions of Measles from Twitter Using Multi-Task
Convolutional Neural Networks},
booktitle = {{MEDINFO} 2021: One World, One Health - Global Partnership for Digital
Innovation - Proceedings of the 18th World Congress on Medical and
Health Informatics, Virtual Event, 2-4 October 2021},
series = {Studies in Health Technology and Informatics},
volume = {290},
pages = {607--611},
publisher = {{IOS} Press},
year = {2021},
url = {https://doi.org/10.3233/SHTI220149},
doi = {10.3233/SHTI220149},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/WangDTT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2108-10221,
author = {Muhammad Amith and
Marcelline R. Harris and
Cooper Stansbury and
Kathleen Ford and
Frank J. Manion and
Cui Tao},
title = {Expressing and Executing Informed Consent Permissions Using {SWRL:}
The All of Us Use Case},
journal = {CoRR},
volume = {abs/2108.10221},
year = {2021},
url = {https://arxiv.org/abs/2108.10221},
eprinttype = {arXiv},
eprint = {2108.10221},
timestamp = {Fri, 27 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2108-10221.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2109-06123,
author = {Yi Nian and
Jingcheng Du and
Larry Bu and
Fang Li and
Xinyue Hu and
Yuji Zhang and
Cui Tao},
title = {Knowledge Graph-based Neurodegenerative Diseases and Diet Relationship
Discovery},
journal = {CoRR},
volume = {abs/2109.06123},
year = {2021},
url = {https://arxiv.org/abs/2109.06123},
eprinttype = {arXiv},
eprint = {2109.06123},
timestamp = {Tue, 21 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2109-06123.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/WeiZALLTX20,
author = {Qiang Wei and
Yaoyun Zhang and
Muhammad Amith and
Rebecca Lin and
Jenay Lapeyrolerie and
Cui Tao and
Hua Xu},
title = {Recognizing software names in biomedical literature using machine
learning},
journal = {Health Informatics J.},
volume = {26},
number = {1},
year = {2020},
url = {https://doi.org/10.1177/1460458219869490},
doi = {10.1177/1460458219869490},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/hij/WeiZALLTX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/BianZT20,
author = {Jiang Bian and
Yaoyun Zhang and
Cui Tao},
title = {Exploring the semantics in mental health research},
journal = {Health Informatics J.},
volume = {26},
number = {2},
pages = {723--725},
year = {2020},
url = {https://doi.org/10.1177/1460458219896886},
doi = {10.1177/1460458219896886},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/hij/BianZT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/LiRDXZSHXT20,
author = {Fang Li and
Guozheng Rao and
Jingcheng Du and
Yang Xiang and
Yaoyun Zhang and
Salih Selek and
Jane Elizabeth Hamilton and
Hua Xu and
Cui Tao},
title = {Ontological representation-oriented term normalization and standardization
of the Research Domain Criteria},
journal = {Health Informatics J.},
volume = {26},
number = {2},
pages = {726--737},
year = {2020},
url = {https://doi.org/10.1177/1460458219832059},
doi = {10.1177/1460458219832059},
timestamp = {Thu, 29 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/hij/LiRDXZSHXT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/LuoDTXZ20,
author = {Jianhong Luo and
Jingcheng Du and
Cui Tao and
Hua Xu and
Yaoyun Zhang},
title = {Exploring temporal suicidal behavior patterns on social media: Insight
from Twitter analytics},
journal = {Health Informatics J.},
volume = {26},
number = {2},
pages = {738--752},
year = {2020},
url = {https://doi.org/10.1177/1460458219832043},
doi = {10.1177/1460458219832043},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/hij/LuoDTXZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/hij/DuanZDHTC20,
author = {Rui Duan and
Xinyuan Zhang and
Jingcheng Du and
Jing Huang and
Cui Tao and
Yong Chen},
title = {On the evidence consistency of pharmacovigilance outcomes between
Food and Drug Administration Adverse Event Reporting System and electronic
medical record data for acute mania patients},
journal = {Health Informatics J.},
volume = {26},
number = {2},
pages = {753--764},
year = {2020},
url = {https://doi.org/10.1177/1460458219833093},
doi = {10.1177/1460458219833093},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/hij/DuanZDHTC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WeiJLDWXXTWZTX20,
author = {Qiang Wei and
Zongcheng Ji and
Zhiheng Li and
Jingcheng Du and
Jingqi Wang and
Jun Xu and
Yang Xiang and
Firat Tiryaki and
Stephen Wu and
Yaoyun Zhang and
Cui Tao and
Hua Xu},
title = {A study of deep learning approaches for medication and adverse drug
event extraction from clinical text},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {1},
pages = {13--21},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocz063},
doi = {10.1093/JAMIA/OCZ063},
timestamp = {Mon, 29 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/WeiJLDWXXTWZTX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/ZhangWDTHZPGB20,
author = {Hansi Zhang and
Christopher Wheldon and
Adam G. Dunn and
Cui Tao and
Jinhai Huo and
Rui Zhang and
Mattia Prosperi and
Yi Guo and
Jiang Bian},
title = {Mining Twitter to assess the determinants of health behavior toward
human papillomavirus vaccination in the United States},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {2},
pages = {225--235},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocz191},
doi = {10.1093/JAMIA/OCZ191},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/ZhangWDTHZPGB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RizviVAMBBTZ20,
author = {Rubina F. Rizvi and
Jake Vasilakes and
Terrence J. Adam and
Genevieve B. Melton and
Jeffrey R. Bishop and
Jiang Bian and
Cui Tao and
Rui Zhang},
title = {iDISK: the integrated DIetary Supplements Knowledge base},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {4},
pages = {539--548},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocz216},
doi = {10.1093/JAMIA/OCZ216},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/RizviVAMBBTZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/LiDHSMRXLCLWL0T20,
author = {Fang Li and
Jingcheng Du and
Yongqun He and
Hsing{-}yi Song and
Mohcine Madkour and
Guozheng Rao and
Yang Xiang and
Yi Luo and
Henry W. Chen and
Sijia Liu and
Liwei Wang and
Hongfang Liu and
Hua Xu and
Cui Tao},
title = {Time event ontology {(TEO):} to support semantic representation and
reasoning of complex temporal relations of clinical events},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {7},
pages = {1046--1056},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocaa058},
doi = {10.1093/JAMIA/OCAA058},
timestamp = {Wed, 08 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/LiDHSMRXLCLWL0T20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RasmyTZXTXZ20,
author = {Laila Rasmy and
Firat Tiryaki and
Yujia Zhou and
Yang Xiang and
Cui Tao and
Hua Xu and
Degui Zhi},
title = {Representation of {EHR} data for predictive modeling: a comparison
between {UMLS} and other terminologies},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {10},
pages = {1593--1599},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocaa180},
doi = {10.1093/JAMIA/OCAA180},
timestamp = {Thu, 29 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/RasmyTZXTXZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/AmithLCWZXXRT20,
author = {Muhammad Amith and
Rebecca Lin and
Licong Cui and
Dennis Wang and
Anna Zhu and
Grace Xiong and
Hua Xu and
Kirk Roberts and
Cui Tao},
title = {Conversational ontology operator: patient-centric vaccine dialogue
management engine for spoken conversational agents},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {20-S},
number = {4},
pages = {259},
year = {2020},
url = {https://doi.org/10.1186/s12911-020-01267-y},
doi = {10.1186/S12911-020-01267-Y},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/AmithLCWZXXRT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ZhangHXLRT20,
author = {Li Zhang and
Jiamei Hu and
Qianzhi Xu and
Fang Li and
Guozheng Rao and
Cui Tao},
title = {A semantic relationship mining method among disorders, genes, and
drugs from different biomedical datasets},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {20-S},
number = {4},
pages = {283},
year = {2020},
url = {https://doi.org/10.1186/s12911-020-01274-z},
doi = {10.1186/S12911-020-01274-Z},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/ZhangHXLRT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/HeTBZ20,
author = {Zhe He and
Cui Tao and
Jiang Bian and
Rui Zhang},
title = {Selected articles from the Fourth International Workshop on Semantics-Powered
Data Mining and Analytics {(SEPDA} 2019)},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {20-S},
number = {4},
pages = {315},
year = {2020},
url = {https://doi.org/10.1186/s12911-020-01292-x},
doi = {10.1186/S12911-020-01292-X},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/HeTBZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/AmithFMT20,
author = {Muhammad Amith and
Kayo Fujimoto and
Rebecca Mauldin and
Cui Tao},
title = {Friend of a Friend with Benefits ontology {(FOAF+):} extending a social
network ontology for public health},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {20-S},
number = {10},
pages = {269},
year = {2020},
url = {https://doi.org/10.1186/s12911-020-01287-8},
doi = {10.1186/S12911-020-01287-8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/AmithFMT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/DuanCTLLTM0020,
author = {Rui Duan and
Zhaoyi Chen and
Jiayi Tong and
Chongliang Luo and
Tianchen Lyu and
Cui Tao and
Demetrius Maraganore and
Jiang Bian and
Yong Chen},
title = {Leverage Real-World Longitudinal Data in Large Clinical Research Networks
for Alzheimer's Disease and Related Dementia {(ADRD)}},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t003-1.4606204/t003-1.4606205/3417129-1.4606536/3417074-1.4606533},
timestamp = {Wed, 17 Apr 2024 11:47:01 +0200},
biburl = {https://dblp.org/rec/conf/amia/DuanCTLLTM0020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/TongCDLLTMK0020,
author = {Jiayi Tong and
Zhaoyi Chen and
Rui Duan and
Wei{-}Hsuan Lo{-}Ciganic and
Tianchen Lyu and
Cui Tao and
Peter A. Merkel and
Henry R. Kranzler and
Jiang Bian and
Yong Chen},
title = {Identifying Clinical Risk Factors for Opioid Use Disorder using a
Distributed Algorithm to Combine Real-World Data from a Large Clinical
Data Research Network},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t003-1.4606204/t003-1.4606205/3415707-1.4606278/3413692-1.4606275},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/TongCDLLTMK0020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/AmithWXRT20,
author = {Muhammad Amith and
Jing Wang and
Grace Xiong and
Kirk Roberts and
Cui Tao},
editor = {Taesung Park and
Young{-}Rae Cho and
Xiaohua Hu and
Illhoi Yoo and
Hyun Goo Woo and
Jianxin Wang and
Julio C. Facelli and
Seungyoon Nam and
Mingon Kang},
title = {A health consumer ontology of fast food information},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2020, Virtual Event, South Korea, December 16-19, 2020},
pages = {1714--1719},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/BIBM49941.2020.9313375},
doi = {10.1109/BIBM49941.2020.9313375},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/AmithWXRT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/XuALTT20,
author = {Angela Xu and
Muhammad Amith and
Jianfu Li and
Lu Tang and
Cui Tao},
editor = {Constantine Stephanidis and
Margherita Antona},
title = {An Interactive Game for Changing Youth Behavior Regarding E-cigarettes},
booktitle = {{HCI} International 2020 - Posters - 22nd International Conference,
{HCII} 2020, Copenhagen, Denmark, July 19-24, 2020, Proceedings, Part
{I}},
series = {Communications in Computer and Information Science},
volume = {1224},
pages = {512--518},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-50726-8\_67},
doi = {10.1007/978-3-030-50726-8\_67},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hci/XuALTT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthcom/LiHPAWXT20,
author = {Juan Li and
Rasha Hendawi and
Vikram Pandey and
Rafa Alenezi and
Xin Wang and
Bo Xie and
Cui Tao},
title = {Development and Evaluation of ADCareOnto - an Ontology for Personalized
Home Care for Persons with Alzheimer's Disease},
booktitle = {22nd {IEEE} International Conference on E-health Networking, Application
{\&} Services, HealthCom 2020, Shenzhen, China, March 1-2, 2021},
pages = {1--6},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/HEALTHCOM49281.2021.9398979},
doi = {10.1109/HEALTHCOM49281.2021.9398979},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/healthcom/LiHPAWXT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/WeiZZHMTX20,
author = {Qiang Wei and
Yujia Zhou and
Bo Zhao and
Xinyue Hu and
Qiaozhu Mei and
Cui Tao and
Hua Xu},
title = {Named Entity Recognition from Table Headers in Randomized Controlled
Trial Articles},
booktitle = {8th {IEEE} International Conference on Healthcare Informatics, {ICHI}
2020, Oldenburg, Germany, November 30 - December 3, 2020},
pages = {1--2},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/ICHI48887.2020.9374323},
doi = {10.1109/ICHI48887.2020.9374323},
timestamp = {Tue, 16 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ichi/WeiZZHMTX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2001-02306,
author = {Muhammad Amith and
Rebecca Lin and
Rachel Cunningham and
Qiwei Luna Wu and
Lara S. Savas and
Yang Gong and
Julie A. Boom and
Lu Tang and
Cui Tao},
title = {Examining Potential Usability and Health Beliefs Among Young Adults
Using a Conversational Agent for {HPV} Vaccine Counseling},
journal = {CoRR},
volume = {abs/2001.02306},
year = {2020},
url = {http://arxiv.org/abs/2001.02306},
eprinttype = {arXiv},
eprint = {2001.02306},
timestamp = {Mon, 13 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2001-02306.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-12833,
author = {Laila Rasmy and
Yang Xiang and
Ziqian Xie and
Cui Tao and
Degui Zhi},
title = {Med-BERT: pre-trained contextualized embeddings on large-scale structured
electronic health records for disease prediction},
journal = {CoRR},
volume = {abs/2005.12833},
year = {2020},
url = {https://arxiv.org/abs/2005.12833},
eprinttype = {arXiv},
eprint = {2005.12833},
timestamp = {Thu, 29 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2005-12833.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-01623,
author = {Mohcine Madkour and
Keith A. Butler and
Eric Mercer and
Ali Bahrami and
Cui Tao},
title = {Semantic based model of Conceptual Work Products for formal verification
of complex interactive systems},
journal = {CoRR},
volume = {abs/2008.01623},
year = {2020},
url = {https://arxiv.org/abs/2008.01623},
eprinttype = {arXiv},
eprint = {2008.01623},
timestamp = {Fri, 07 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2008-01623.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HurTH19,
author = {Junguk Hur and
Cui Tao and
Yongqun He},
title = {A 2018 workshop: vaccine and drug ontology studies {(VDOS} 2018)},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {21},
pages = {705},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-3191-9},
doi = {10.1186/S12859-019-3191-9},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HurTH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AmithRT19,
author = {Muhammad Amith and
Kirk Roberts and
Cui Tao},
title = {Conceiving an application ontology to model patient human papillomavirus
vaccine counseling for dialogue management},
journal = {{BMC} Bioinform.},
volume = {20-S},
number = {21},
pages = {706},
year = {2019},
url = {https://doi.org/10.1186/s12859-019-3193-7},
doi = {10.1186/S12859-019-3193-7},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AmithRT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/XiangFSJZT19,
author = {Yang Xiang and
Kayo Fujimoto and
John A. Schneider and
Yuxi Jia and
Degui Zhi and
Cui Tao},
title = {Network context matters: graph convolutional network model over social
networks improves the detection of unknown {HIV} infections among
young men who have sex with men},
journal = {J. Am. Medical Informatics Assoc.},
volume = {26},
number = {11},
pages = {1263--1271},
year = {2019},
url = {https://doi.org/10.1093/jamia/ocz070},
doi = {10.1093/JAMIA/OCZ070},
timestamp = {Thu, 29 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/XiangFSJZT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/DuCPXTL19,
author = {Jingcheng Du and
Qingyu Chen and
Yifan Peng and
Yang Xiang and
Cui Tao and
Zhiyong Lu},
title = {ML-Net: multi-label classification of biomedical texts with deep neural
networks},
journal = {J. Am. Medical Informatics Assoc.},
volume = {26},
number = {11},
pages = {1279--1285},
year = {2019},
url = {https://doi.org/10.1093/jamia/ocz085},
doi = {10.1093/JAMIA/OCZ085},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/DuCPXTL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ChenJZLZTZ19,
author = {Guocai Chen and
Yuxi Jia and
Lisha Zhu and
Ping Li and
Lin Zhang and
Cui Tao and
W. Jim Zheng},
title = {Gene fingerprint model for literature based detection of the associations
among complex diseases: a case study of {COPD}},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {1},
pages = {20:1--20:9},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0738-7},
doi = {10.1186/S12911-019-0738-7},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/ChenJZLZTZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ZhangTGWZ19,
author = {Yaoyun Zhang and
Cui Tao and
Yang Gong and
Kai Wang and
Zhongming Zhao},
title = {The International Conference on Intelligent Biology and Medicine 2018:
Medical Informatics Thematic Track (MedicalInfo2018)},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {1},
pages = {21:1--21:3},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0732-0},
doi = {10.1186/S12911-019-0732-0},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/ZhangTGWZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/XiangXSLRZTLZWJ19,
author = {Yang Xiang and
Jun Xu and
Yuqi Si and
Zhiheng Li and
Laila Rasmy and
Yujia Zhou and
Firat Tiryaki and
Fang Li and
Yaoyun Zhang and
Yonghui Wu and
Xiaoqian Jiang and
W. Jim Zheng and
Degui Zhi and
Cui Tao and
Hua Xu},
title = {Time-sensitive clinical concept embeddings learned from large electronic
health records},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {2},
pages = {139--148},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0766-3},
doi = {10.1186/S12911-019-0766-3},
timestamp = {Mon, 29 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/XiangXSLRZTLZWJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/HuangZTDDYMTC19,
author = {Jing Huang and
Xinyuan Zhang and
Jiayi Tong and
Jingcheng Du and
Rui Duan and
Liu Yang and
Jason H. Moore and
Cui Tao and
Yong Chen},
title = {Comparing drug safety of hepatitis {C} therapies using post-market
data},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {4},
pages = {147:1--147:12},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0860-6},
doi = {10.1186/S12911-019-0860-6},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/HuangZTDDYMTC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/HeBTZ19,
author = {Zhe He and
Jiang Bian and
Cui Tao and
Rui Zhang},
title = {Selected articles from the Third International Workshop on Semantics-Powered
Data Analytics {(SEPDA} 2018)},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {4},
pages = {148:1--148:3},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0855-3},
doi = {10.1186/S12911-019-0855-3},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/HeBTZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/AmithMLHWHT19,
author = {Muhammad Amith and
Frank J. Manion and
Chen Liang and
Marcelline R. Harris and
Dennis Wang and
Yongqun He and
Cui Tao},
title = {Architecture and usability of OntoKeeper, an ontology evaluation tool},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {4},
pages = {152:1--152:18},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0859-z},
doi = {10.1186/S12911-019-0859-Z},
timestamp = {Thu, 08 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/AmithMLHWHT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/DuC0LJBM0L0T19,
author = {Jingcheng Du and
Rachel Cunningham and
Yang Xiang and
Fang Li and
Yuxi Jia and
Julie A. Boom and
Sahiti Myneni and
Jiang Bian and
Chongliang Luo and
Yong Chen and
Cui Tao},
title = {Leveraging deep learning to understand health beliefs about the Human
Papillomavirus Vaccine from social media},
journal = {npj Digit. Medicine},
volume = {2},
year = {2019},
url = {https://doi.org/10.1038/s41746-019-0102-4},
doi = {10.1038/S41746-019-0102-4},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/DuC0LJBM0L0T19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HarrisMSSCT19,
author = {Marcelline R. Harris and
Frank J. Manion and
Madhuri Sankaranarayanapillai and
Hsing{-}yi Song and
Marisa Conte and
Cui Tao},
title = {A Scoping Review to Identify Biobank Classification and Permissions
to Share Metadata},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t007-1.4573510/t007-1.4573511/3200691-1.4574220/3202762-1.4574217},
timestamp = {Wed, 17 Apr 2024 11:47:08 +0200},
biburl = {https://dblp.org/rec/conf/amia/HarrisMSSCT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/VajdaOSHMT19,
author = {Jonathan M. Vajda and
J. Neil Otte and
Cooper Stansbury and
Marcelline R. Harris and
Frank J. Manion and
Cui Tao},
title = {Refactoring and Expanding the Informed Consent Ontology {(ICO)}},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t007-1.4573510/t007-1.4573511/3203159-1.4573617/3203270-1.4573614},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/VajdaOSHMT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/VajdaOSHUMT19,
author = {Jonathan M. Vajda and
J. Neil Otte and
Cooper Stansbury and
Marcelline R. Harris and
Elizabeth Umberfield and
Frank J. Manion and
Cui Tao},
title = {Expanding the Representation of Permissions and Deontic Roles in the
Informed Consent Ontology {(ICO)}},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t006-1.4574499/t006-1.4574500/3203488-1.4574540/3203440-1.4574537},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/VajdaOSHUMT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/WeiJSDWT0TR019,
author = {Qiang Wei and
Zongcheng Ji and
Yuqi Si and
Jingcheng Du and
Jingqi Wang and
Firat Tiryaki and
Stephen Wu and
Cui Tao and
Kirk Roberts and
Hua Xu},
title = {Relation Extraction from Clinical Narratives Using Pre-trained Language
Models},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t005-1.4574828/t005-1.4574829/3203466-1.4574845/3203355-1.4574842},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/WeiJSDWT0TR019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/AmithCRXT19,
author = {Muhammad Amith and
Licong Cui and
Kirk Roberts and
Hua Xu and
Cui Tao},
editor = {Illhoi Yoo and
Jinbo Bi and
Xiaohua Hu},
title = {Ontology of Consumer Health Vocabulary: providing a formal and interoperable
semantic resource for linking lay language and medical terminology},
booktitle = {2019 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2019, San Diego, CA, USA, November 18-21, 2019},
pages = {1177--1178},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/BIBM47256.2019.8983220},
doi = {10.1109/BIBM47256.2019.8983220},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/AmithCRXT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/AmithFT19,
author = {Muhammad Tuan Amith and
Kayo Fujimoto and
Cui Tao},
editor = {Constantine Stephanidis},
title = {{NET-EXPO:} {A} Gephi Plugin Towards Social Network Analysis of Network
Exposure for Unipartite and Bipartite Graphs},
booktitle = {{HCI} International 2019 - Posters - 21st International Conference,
{HCII} 2019, Orlando, FL, USA, July 26-31, 2019, Proceedings, Part
{III}},
series = {Communications in Computer and Information Science},
volume = {1034},
pages = {3--12},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-23525-3\_1},
doi = {10.1007/978-3-030-23525-3\_1},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hci/AmithFT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/healthcom/MaharjanLKT19,
author = {Bikesh Maharjan and
Juan Li and
Jun Kong and
Cui Tao},
title = {Alexa, What Should {I} Eat? : {A} Personalized Virtual Nutrition Coach
for Native American Diabetes Patients Using Amazon's Smart Speaker
Technology},
booktitle = {2019 {IEEE} International Conference on E-health Networking, Application
{\&} Services, HealthCom 2019, Bogot{\'{a}}, Colombia, October
14-16, 2019},
pages = {1--6},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/HealthCom46333.2019.9009613},
doi = {10.1109/HEALTHCOM46333.2019.9009613},
timestamp = {Tue, 10 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/healthcom/MaharjanLKT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VajdaOSMHT19,
author = {Jonathan M. Vajda and
J. Neil Otte and
Cooper Stansbury and
Frank J. Manion and
Marcelline R. Harris and
Cui Tao},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Using Stases to Enrich Queries for When and Where Regulations Are
in Force},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_53.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VajdaOSMHT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/LiWPXATDR19,
author = {Fang Li and
Mingqiang Wang and
Huy Anh Pham and
Yang Xiang and
Muhammad Tuan Amith and
Cui Tao and
Jingcheng Du and
Guozheng Rao},
title = {Systematic Design of Drug Repurposing-Oriented Alzheimer's Disease
Ontology},
booktitle = {2019 {IEEE} International Conference on Healthcare Informatics, {ICHI}
2019, Xi'an, China, June 10-13, 2019},
pages = {1--5},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/ICHI.2019.8904505},
doi = {10.1109/ICHI.2019.8904505},
timestamp = {Sun, 06 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ichi/LiWPXATDR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/itch/AmithZCLSSCGBRT19,
author = {Muhammad Amith and
Anna Zhu and
Rachel Cunningham and
Rebecca Lin and
Lara S. Savas and
Laura Shay and
Yong Chen and
Yang Gong and
Julie Boom and
Kirk Roberts and
Cui Tao},
editor = {Francis Y. Lau and
John A. Bartle{-}Clar and
Gerry Bliss and
Elizabeth M. Borycki and
Karen L. Courtney and
Alex Mu{-}Hsing Kuo and
Andr{\'{e}} Kushniruk and
Helen Monkman and
Abdul Vahabpour Roudsari},
title = {Early Usability Assessment of a Conversational Agent for {HPV} Vaccination},
booktitle = {Improving Usability, Safety and Patient Outcomes with Health Information
Technology - From Research to Practice, Information Technology and
Communications in Health Conference, {ITCH} 2019, Victoria, BC, Canada,
14-17 February 2019},
series = {Studies in Health Technology and Informatics},
volume = {257},
pages = {17--23},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/978-1-61499-951-5-17},
doi = {10.3233/978-1-61499-951-5-17},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/itch/AmithZCLSSCGBRT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/SoysalWWJHJDSSW19,
author = {Ergin Soysal and
Jeremy L. Warner and
Jingqi Wang and
Min Jiang and
Krysten Harvey and
Sandeep Kumar Jain and
Xiao Dong and
Hsing{-}yi Song and
Harish Siddhanamatha and
Liwei Wang and
Qi Dai and
Qingxia Chen and
Xianglin Du and
Cui Tao and
Ping Yang and
Joshua Charles Denny and
Hongfang Liu and
Hua Xu},
editor = {Lucila Ohno{-}Machado and
Brigitte S{\'{e}}roussi},
title = {Developing Customizable Cancer Information Extraction Modules for
Pathology Reports Using {CLAMP}},
booktitle = {{MEDINFO} 2019: Health and Wellbeing e-Networks for All - Proceedings
of the 17th World Congress on Medical and Health Informatics, Lyon,
France, 25-30 August 2019},
series = {Studies in Health Technology and Informatics},
volume = {264},
pages = {1041--1045},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/SHTI190383},
doi = {10.3233/SHTI190383},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/SoysalWWJHJDSSW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/GonzalezLLWBCDF19,
author = {Graciela Gonzalez and
Zhiyong Lu and
Robert Leaman and
Davy Weissenbacher and
Mary Regina Boland and
Yong Chen and
Jingcheng Du and
Juliane Fluck and
Casey S. Greene and
John H. Holmes and
Aditya Kashyap and
Rikke Linnemann Nielsen and
Zhengqing Ouyang and
Sebastian Schaaf and
Jaclyn N. Taroni and
Cui Tao and
Yuping Zhang and
Hongfang Liu},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Marylyn D. Ritchie and
Teri E. Klein},
title = {Text Mining and Machine Learning for Precision Medicine},
booktitle = {Biocomputing 2019: Proceedings of the Pacific Symposium, The Big Island
of Hawaii, Hawaii, USA, January 3-7, 2019},
pages = {449--454},
year = {2019},
url = {http://psb.stanford.edu/psb-online/proceedings/psb19/wkshop-text.pdf},
timestamp = {Wed, 09 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/psb/GonzalezLLWBCDF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/AmithLCWZX0RT19,
author = {Muhammad Amith and
Rebecca Lin and
Licong Cui and
Dennis Wang and
Anna Zhu and
Grace Xiong and
Hua Xu and
Kirk Roberts and
Cui Tao},
editor = {Zhe He and
Jiang Bian and
Cui Tao and
Rui Zhang},
title = {An Ontology-Powered Dialogue Engine For Patient Communication of Vaccines},
booktitle = {Proceedings of the 4th International Workshop on Semantics-Powered
Data Mining and Analytics co-located with the 18th International Semantic
Web Conference {(ISWC} 2019), Aukland, New Zealand, October 27, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2427},
pages = {24--30},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2427/SEPDA\_2019\_paper\_14.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:08 +0100},
biburl = {https://dblp.org/rec/conf/semweb/AmithLCWZX0RT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/RaoZZLLT19,
author = {Guozheng Rao and
Li Zhang and
Xiaowang Zhang and
Wenwen Li and
Fang Li and
Cui Tao},
editor = {Zhe He and
Jiang Bian and
Cui Tao and
Rui Zhang},
title = {A Multi-Source Linked Open Data Fusion Method for Gene Disorder Drug
Relationship Querying},
booktitle = {Proceedings of the 4th International Workshop on Semantics-Powered
Data Mining and Analytics co-located with the 18th International Semantic
Web Conference {(ISWC} 2019), Aukland, New Zealand, October 27, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2427},
pages = {31--35},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2427/SEPDA\_2019\_paper\_7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/RaoZZLLT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/semweb/2019sepda,
editor = {Zhe He and
Jiang Bian and
Cui Tao and
Rui Zhang},
title = {Proceedings of the 4th International Workshop on Semantics-Powered
Data Mining and Analytics co-located with the 18th International Semantic
Web Conference {(ISWC} 2019), Aukland, New Zealand, October 27, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2427},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2427},
urn = {urn:nbn:de:0074-2427-8},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/2019sepda.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-03167,
author = {Jingcheng Du and
Chongliang Luo and
Qiang Wei and
Yong Chen and
Cui Tao},
title = {Exploring difference in public perceptions on {HPV} vaccine between
gender groups from Twitter using deep learning},
journal = {CoRR},
volume = {abs/1907.03167},
year = {2019},
url = {http://arxiv.org/abs/1907.03167},
eprinttype = {arXiv},
eprint = {1907.03167},
timestamp = {Wed, 09 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-03167.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-11624,
author = {Hansi Zhang and
Christopher Wheldon and
Adam G. Dunn and
Cui Tao and
Jinhai Huo and
Rui Zhang and
Mattia Prosperi and
Yi Guo and
Jiang Bian},
title = {Mining Twitter to Assess the Determinants of Health Behavior towards
Human Papillomavirus Vaccination in the United States},
journal = {CoRR},
volume = {abs/1907.11624},
year = {2019},
url = {http://arxiv.org/abs/1907.11624},
eprinttype = {arXiv},
eprint = {1907.11624},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-11624.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/AmithT18,
author = {Muhammad Amith and
Cui Tao},
title = {Representing vaccine misinformation using ontologies},
journal = {J. Biomed. Semant.},
volume = {9},
number = {1},
pages = {22:1--22:13},
year = {2018},
url = {https://doi.org/10.1186/s13326-018-0190-0},
doi = {10.1186/S13326-018-0190-0},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/AmithT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WangZJWDLTJZX18,
author = {Li Wang and
Yaoyun Zhang and
Min Jiang and
Jingqi Wang and
Jiancheng Dong and
Yun Liu and
Cui Tao and
Guoqian Jiang and
Yi Zhou and
Hua Xu},
title = {Toward a normalized clinical drug knowledge base in China - applying
the RxNorm model to Chinese clinical drugs},
journal = {J. Am. Medical Informatics Assoc.},
volume = {25},
number = {7},
pages = {809--818},
year = {2018},
url = {https://doi.org/10.1093/jamia/ocy020},
doi = {10.1093/JAMIA/OCY020},
timestamp = {Wed, 08 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/WangZJWDLTJZX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/Amith0BVT18,
author = {Muhammad Amith and
Zhe He and
Jiang Bian and
Juan Antonio Lossio{-}Ventura and
Cui Tao},
title = {Assessing the practice of biomedical ontology evaluation: Gaps and
opportunities},
journal = {J. Biomed. Informatics},
volume = {80},
pages = {1--13},
year = {2018},
url = {https://doi.org/10.1016/j.jbi.2018.02.010},
doi = {10.1016/J.JBI.2018.02.010},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/Amith0BVT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/LeeZJXTX18,
author = {Hee{-}Jin Lee and
Yaoyun Zhang and
Min Jiang and
Jun Xu and
Cui Tao and
Hua Xu},
title = {Identifying direct temporal relations between time and events from
clinical notes},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {{S-2}},
pages = {23--34},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0627-5},
doi = {10.1186/S12911-018-0627-5},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/LeeZJXTX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/HeTBZH18,
author = {Zhe He and
Cui Tao and
Jiang Bian and
Rui Zhang and
Jingshan Huang},
title = {Introduction: selected extended articles from the 2nd International
Workshop on Semantics-Powered Data Analytics {(SEPDA} 2017)},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {{S-2}},
pages = {56:1--56:4},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0624-8},
doi = {10.1186/S12911-018-0624-8},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/HeTBZH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/ZhangWLT18,
author = {Xinyuan Zhang and
Shiqi Wang and
Jie Liu and
Cui Tao},
title = {Towards improving diagnosis of skin diseases by combining deep neural
network and human knowledge},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {{S-2}},
pages = {69--76},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0631-9},
doi = {10.1186/S12911-018-0631-9},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/ZhangWLT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/DuZLJWTX18,
author = {Jingcheng Du and
Yaoyun Zhang and
Jianhong Luo and
Yuxi Jia and
Qiang Wei and
Cui Tao and
Hua Xu},
title = {Extracting psychiatric stressors for suicide from social media using
deep learning},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {{S-2}},
pages = {77--87},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0632-8},
doi = {10.1186/S12911-018-0632-8},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/DuZLJWTX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/LinALDCT18,
author = {Rebecca Lin and
Muhammad Amith and
Chen Liang and
Rui Duan and
Yong Chen and
Cui Tao},
title = {Visualized Emotion Ontology: a model for representing visual cues
of emotions},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {{S-2}},
pages = {101--113},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0634-6},
doi = {10.1186/S12911-018-0634-6},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/LinALDCT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AnSGTZX18,
author = {Jing An and
Mandana Salimi and
Anupama E. Gururaj and
Cui Tao and
Degui Zhi and
Hua Xu},
title = {Development of HeartData, a Data Discovery Index Prototype for Cardiovascular
data},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2968892-1.4263199/2977103-1.4263196},
timestamp = {Wed, 17 Apr 2024 11:47:15 +0200},
biburl = {https://dblp.org/rec/conf/amia/AnSGTZX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/DuLJXTMT18,
author = {Jingcheng Du and
Fang Li and
Yuxi Jia and
Yang Xiang and
Lu Tang and
Sahiti Myneni and
Cui Tao},
title = {Mining Human Papillomavirus Vaccination Health Beliefs from Twitter
Using Attentive Recurrent Neural Network},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t006-1.4263223/t006-1.4263224/2969141-1.4263525/2977235-1.4263522},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/DuLJXTMT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LiDRT18,
author = {Fang Li and
Jingcheng Du and
Guozheng Rao and
Cui Tao},
title = {Construction of Drug Repurposing-oriented Alzheimer's Disease Ontology},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2976150-1.4262731/2977234-1.4262728},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LiDRT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ManionHAT18,
author = {Frank J. Manion and
Marcelline R. Harris and
Muhamamd F. Amith and
Cui Tao},
title = {Development and Validation of an Ontological Representation of the
{US} Common Rule},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t006-1.4263223/t006-1.4263224/2977321-1.4263387/2976570-1.4263384},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ManionHAT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/TongHDCTC18,
author = {Jiayi Tong and
Jing Huang and
Jingcheng Du and
Yi Cai and
Cui Tao and
Yong Chen},
title = {Identification of Rare Adverse Events with Year-varying Reporting
Rates for {FLU4} Vaccine in {VAERS}},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t005-1.4263615/t005-1.4263616/2975308-1.4263641/2976332-1.4263638},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/TongHDCTC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/XiangXDZT18,
author = {Yang Xiang and
Jun Xu and
Jingcheng Du and
Degui Zhi and
Cui Tao},
title = {Asthma Onset Prediction Using Structured {EMR} Data},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2977175-1.4262251/2974728-1.4262248},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/XiangXDZT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZhangZGT18,
author = {Xinyuan Zhang and
Sicheng Zhou and
Luca Giancardo and
Cui Tao},
title = {Computer Aided Diagnosis of Chest X-rays using by Combining Deep Convolutional
Neural Networks},
booktitle = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
San Francisco, CA, November 3-7, 2018},
publisher = {{AMIA}},
year = {2018},
url = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2974586-1.4262212/2976451-1.4262209},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZhangZGT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/AmithMLHWHT18,
author = {Muhammad Amith and
Frank J. Manion and
Chen Liang and
Marcelline R. Harris and
Dennis Wang and
Yongqun He and
Cui Tao},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {OntoKeeper: Semiotic-driven Ontology Evaluation Tool For Biomedical
Ontologists},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1614--1617},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621458},
doi = {10.1109/BIBM.2018.8621458},
timestamp = {Thu, 01 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/AmithMLHWHT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/CongFLXRT18,
author = {Qing Cong and
Zhiyong Feng and
Fang Li and
Yang Xiang and
Guozheng Rao and
Cui Tao},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {X-A-BiLSTM: a Deep Learning Approach for Depression Detection in Imbalanced
Data},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1624--1627},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621230},
doi = {10.1109/BIBM.2018.8621230},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/CongFLXRT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/CongFLZRT18,
author = {Qing Cong and
Zhiyong Feng and
Fang Li and
Li Zhang and
Guozheng Rao and
Cui Tao},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Constructing Biomedical Knowledge Graph Based on SemMedDB and Linked
Open Data},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1628--1631},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621568},
doi = {10.1109/BIBM.2018.8621568},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/CongFLZRT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/HuangZTDDYMCT18,
author = {Jing Huang and
Xinyuan Zhang and
Jiayi Tong and
Jingcheng Du and
Rui Duan and
Liu Yang and
Jason H. Moore and
Yong Chen and
Cui Tao},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Comparing adverse effects of Hepatitis {C} drugs using {FAERS} data},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1653--1656},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621427},
doi = {10.1109/BIBM.2018.8621427},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/HuangZTDDYMCT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hci/AmithLLGT18,
author = {Muhammad Amith and
Rebecca Lin and
Chen Liang and
Yang Gong and
Cui Tao},
editor = {Constantine Stephanidis},
title = {VEO-Engine: Interfacing and Reasoning with an Emotion Ontology for
Device Visual Expression},
booktitle = {{HCI} International 2018 - Posters' Extended Abstracts - 20th International
Conference, {HCI} International 2018, Las Vegas, NV, USA, July 15-20,
2018, Proceedings, Part {II}},
series = {Communications in Computer and Information Science},
volume = {851},
pages = {349--355},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-319-92279-9\_47},
doi = {10.1007/978-3-319-92279-9\_47},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/hci/AmithLLGT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OtteSVMUHHOBDT18,
author = {J. Neil Otte and
Cooper Stansbury and
Jonathan Vajda and
Frank J. Manion and
Elizabeth Umberfield and
Yongqun He and
Marcelline R. Harris and
Jihad S. Obeid and
Mathias Brochhausen and
William D. Duncan and
Cui Tao},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Coordinated Evolution of Ontologies of Informed Consent},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_59.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OtteSVMUHHOBDT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/LuoDTXZ18,
author = {Jianhong Luo and
Jingcheng Du and
Cui Tao and
Hua Xu and
Yaoyun Zhang},
title = {Exploring Temporal Patterns of Suicidal Behavior on Twitter},
booktitle = {{IEEE} International Conference on Healthcare Informatics Workshops,
{ICHI} Workshops 2018, New York, NY, USA, June 4-7, 2018},
pages = {55--56},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/ICHI-W.2018.00017},
doi = {10.1109/ICHI-W.2018.00017},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/LuoDTXZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/ZhangDDHCT18,
author = {Xinyuan Zhang and
Rui Duan and
Jingcheng Du and
Jing Huang and
Yong Chen and
Cui Tao},
title = {Comparing Pharmacovigilance Outcomes Between {FAERS} and {EMR} Data
for Acute Mania Patients},
booktitle = {{IEEE} International Conference on Healthcare Informatics Workshops,
{ICHI} Workshops 2018, New York, NY, USA, June 4-7, 2018},
pages = {57--59},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/ICHI-W.2018.00018},
doi = {10.1109/ICHI-W.2018.00018},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/ZhangDDHCT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/LiRDXZSHXT18,
author = {Fang Li and
Guozheng Rao and
Jingcheng Du and
Yang Xiang and
Yaoyun Zhang and
Salih Selek and
Jane Elizabeth Hamilton and
Hua Xu and
Cui Tao},
title = {Term Standardization and Normalization for Research Domain Criteria
(RDoC)},
booktitle = {{IEEE} International Conference on Healthcare Informatics Workshops,
{ICHI} Workshops 2018, New York, NY, USA, June 4-7, 2018},
pages = {60--61},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/ICHI-W.2018.00019},
doi = {10.1109/ICHI-W.2018.00019},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/LiRDXZSHXT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1811-05475,
author = {Jingcheng Du and
Qingyu Chen and
Yifan Peng and
Yang Xiang and
Cui Tao and
Zhiyong Lu},
title = {ML-Net: multi-label classification of biomedical texts with deep neural
networks},
journal = {CoRR},
volume = {abs/1811.05475},
year = {2018},
url = {http://arxiv.org/abs/1811.05475},
eprinttype = {arXiv},
eprint = {1811.05475},
timestamp = {Wed, 08 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1811-05475.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/Du0SLT17,
author = {Jingcheng Du and
Jun Xu and
Hsing{-}yi Song and
Xiangyu Liu and
Cui Tao},
title = {Optimization on machine learning based approaches for sentiment analysis
on {HPV} vaccines related tweets},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {9:1--9:7},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0120-6},
doi = {10.1186/S13326-017-0120-6},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/Du0SLT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/AmithT17,
author = {Muhammad Amith and
Cui Tao},
title = {Modulated evaluation metrics for drug-based ontologies},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {17:1--17:8},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0124-2},
doi = {10.1186/S13326-017-0124-2},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/AmithT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/SharmaSTWCJ17,
author = {Deepak K. Sharma and
Harold R. Solbrig and
Cui Tao and
Chunhua Weng and
Christopher G. Chute and
Guoqian Jiang},
title = {Building a semantic web-based metadata repository for facilitating
detailed clinical modeling in cancer genome studies},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {19:1--19:11},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0130-4},
doi = {10.1186/S13326-017-0130-4},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/SharmaSTWCJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/AmithCSBSTC17,
author = {Muhammad Amith and
Rachel Cunningham and
Lara S. Savas and
Julie Boom and
Roger W. Schvaneveldt and
Cui Tao and
Trevor Cohen},
title = {Using Pathfinder networks to discover alignment between expert and
consumer conceptual knowledge from online vaccine content},
journal = {J. Biomed. Informatics},
volume = {74},
pages = {33--45},
year = {2017},
url = {https://doi.org/10.1016/j.jbi.2017.08.007},
doi = {10.1016/J.JBI.2017.08.007},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/AmithCSBSTC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/AmithSZXT17,
author = {Muhammad Amith and
Hsing{-}yi Song and
Yaoyun Zhang and
Hua Xu and
Cui Tao},
title = {Lightweight predicate extraction for patient-level cancer information
and ontology development},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {17},
number = {2},
pages = {23--34},
year = {2017},
url = {https://doi.org/10.1186/s12911-017-0465-x},
doi = {10.1186/S12911-017-0465-X},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/AmithSZXT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/DuXST17,
author = {Jingcheng Du and
Jun Xu and
Hsing{-}yi Song and
Cui Tao},
title = {Leveraging machine learning-based approaches to assess human papillomavirus
vaccination sentiment trends with Twitter data},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {17},
number = {2},
pages = {63--70},
year = {2017},
url = {https://doi.org/10.1186/s12911-017-0469-6},
doi = {10.1186/S12911-017-0469-6},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/DuXST17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/TaoGXZ17,
author = {Cui Tao and
Yang Gong and
Hua Xu and
Zhongming Zhao},
title = {Introduction: the International Conference on Intelligent Biology
and Medicine {(ICIBM)} 2016: special focus on medical informatics
and big data},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {17},
number = {2},
pages = {77:1--77:3},
year = {2017},
url = {https://doi.org/10.1186/s12911-017-0462-0},
doi = {10.1186/S12911-017-0462-0},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/TaoGXZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/CaiDHEHTC17,
author = {Yi Cai and
Jingcheng Du and
Jing Huang and
Susan S. Ellenberg and
Sean Hennessy and
Cui Tao and
Yong Chen},
title = {A signal detection method for temporal variation of adverse effect
with vaccine adverse event reporting system data},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {17},
number = {2},
pages = {93--100},
year = {2017},
url = {https://doi.org/10.1186/s12911-017-0472-y},
doi = {10.1186/S12911-017-0472-Y},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/CaiDHEHTC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HarrisMSHAT17,
author = {Marcelline R. Harris and
Frank J. Manion and
Hsing{-}yi Song and
Yongqun He and
Muhamamd F. Amith and
Cui Tao},
title = {From Scoping Review to Metadata: An Evidence-Based Approach to Identifying
Informed Consent Metadata for Biorepositories},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2728147-1.4258087/2731126-1.4258084},
timestamp = {Wed, 17 Apr 2024 11:47:24 +0200},
biburl = {https://dblp.org/rec/conf/amia/HarrisMSHAT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/JiangCCTM17,
author = {Guoqian Jiang and
Walter S. Campbell and
Timothy Clark and
Cui Tao and
Mark A. Musen},
title = {Big Data to Knowledge {(BD2K)} and the Application of Metadata},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t002-1.4258887/f002-1.4258888/2731676-1.4258964/2730665-1.4258961},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/JiangCCTM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZhangZWDBGSDTB17,
author = {Hansi Zhang and
Yunpeng Zhao and
Christopher Wheldon and
Xinsong Du and
Terrell Brown and
Yi Guo and
Stephanie Staras and
Jingcheng Du and
Cui Tao and
Jiang Bian},
title = {A Twitter Study of the Relationship between the Geographic Variations
of {HPV} Vaccination Rates and Online Information in the United States},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2728314-1.4257419/2731206-1.4257416},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZhangZWDBGSDTB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/DuZTX17,
author = {Jingcheng Du and
Yaoyun Zhang and
Cui Tao and
Hua Xu},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {A pilot study of mining association between psychiatric stressors
and symptoms in tweets},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {1254--1257},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217838},
doi = {10.1109/BIBM.2017.8217838},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/DuZTX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LeeZXTXJ17,
author = {Hee{-}Jin Lee and
Yaoyun Zhang and
Jun Xu and
Cui Tao and
Hua Xu and
Min Jiang},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {Towards practical temporal relation extraction from clinical notes:
An analysis of direct temporal relations},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {1272--1275},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217842},
doi = {10.1109/BIBM.2017.8217842},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/LeeZXTXJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/LinALT17,
author = {Rebecca Lin and
Muhammad Tuan Amith and
Chen Liang and
Cui Tao},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {Designing an ontology for emotion-driven visual representations},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {1280--1283},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217844},
doi = {10.1109/BIBM.2017.8217844},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/LinALT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhangWLT17,
author = {Xinyuan Zhang and
Shiqi Wang and
Jie Liu and
Cui Tao},
editor = {Xiaohua Hu and
Chi{-}Ren Shyu and
Yana Bromberg and
Jean Gao and
Yang Gong and
Dmitry Korkin and
Illhoi Yoo and
Huiru Jane Zheng},
title = {Computer-aided diagnosis of four common cutaneous diseases using deep
learning algorithm},
booktitle = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
pages = {1304--1306},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/BIBM.2017.8217850},
doi = {10.1109/BIBM.2017.8217850},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhangWLT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/0002WICTWL17,
author = {Sijia Liu and
Liwei Wang and
Donna M. Ihrke and
Vipin Chaudhary and
Cui Tao and
Chunhua Weng and
Hongfang Liu},
title = {Correlating Lab Test Results in Clinical Notes with Structured Lab
Data: {A} Case Study in HbA1c and Glucose},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2017, San Francisco,
CA, USA, March 27-30, 2017},
publisher = {{AMIA}},
year = {2017},
url = {http://knowledge.amia.org/amia-64484-cri2017-1.3520710/t002-1.3521687/t002-1.3521688/a034-1.3521720/a035-1.3521717},
timestamp = {Fri, 05 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cri/0002WICTWL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/Du0ST17,
author = {Jingcheng Du and
Jun Xu and
Hsing{-}yi Song and
Cui Tao},
title = {Leveraging Machine Learning Based Approaches to Assess Human Papillomavirus
Vaccination Sentiment Trends with Twitter},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2017, San Francisco,
CA, USA, March 27-30, 2017},
publisher = {{AMIA}},
year = {2017},
url = {http://knowledge.amia.org/amia-64484-cri2017-1.3520710/t003-1.3521532/t003-1.3521533/a052-1.3521662/a053-1.3521659},
timestamp = {Tue, 23 Jan 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cri/Du0ST17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dmbd/DuanZDHTC17,
author = {Rui Duan and
Xinyuan Zhang and
Jingcheng Du and
Jing Huang and
Cui Tao and
Yong Chen},
editor = {Ying Tan and
Hideyuki Takagi and
Yuhui Shi},
title = {Post-marketing Drug Safety Evaluation Using Data Mining Based on {FAERS}},
booktitle = {Data Mining and Big Data - Second International Conference, {DMBD}
2017, Fukuoka, Japan, July 27 - August 1, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10387},
pages = {379--389},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-61845-6\_38},
doi = {10.1007/978-3-319-61845-6\_38},
timestamp = {Wed, 09 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dmbd/DuanZDHTC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ieaaie/AmithZXT17,
author = {Muhammad Amith and
Yaoyun Zhang and
Hua Xu and
Cui Tao},
editor = {Salem Benferhat and
Karim Tabia and
Moonis Ali},
title = {Knowledge-Based Approach for Named Entity Recognition in Biomedical
Literature: {A} Use Case in Biomedical Software Identification},
booktitle = {Advances in Artificial Intelligence: From Theory to Practice - 30th
International Conference on Industrial Engineering and Other Applications
of Applied Intelligent Systems, {IEA/AIE} 2017, Arras, France, June
27-30, 2017, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {10351},
pages = {386--395},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-60045-1\_40},
doi = {10.1007/978-3-319-60045-1\_40},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ieaaie/AmithZXT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/AmithMHZXT17,
author = {Muhammad Amith and
Frank J. Manion and
Marcelline R. Harris and
Yaoyun Zhang and
Hua Xu and
Cui Tao},
editor = {Adi V. Gundlapalli and
Marie{-}Christine Jaulent and
Dongsheng Zhao},
title = {Expressing Biomedical Ontologies in Natural Language for Expert Evaluation},
booktitle = {{MEDINFO} 2017: Precision Healthcare through Informatics - Proceedings
of the 16th World Congress on Medical and Health Informatics, Hangzhou,
China, 21-25 August 2017},
series = {Studies in Health Technology and Informatics},
volume = {245},
pages = {838--842},
publisher = {{IOS} Press},
year = {2017},
url = {https://doi.org/10.3233/978-1-61499-830-3-838},
doi = {10.3233/978-1-61499-830-3-838},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/AmithMHZXT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/DuHDCT17,
author = {Jingcheng Du and
Jing Huang and
Rui Duan and
Yong Chen and
Cui Tao},
editor = {Adi V. Gundlapalli and
Marie{-}Christine Jaulent and
Dongsheng Zhao},
title = {Comparing the Human Papillomavirus Vaccination Opinions Trends from
Different Twitter User Groups with a Machine Learning Based System
and Semiparametric Nonlinear Regression},
booktitle = {{MEDINFO} 2017: Precision Healthcare through Informatics - Proceedings
of the 16th World Congress on Medical and Health Informatics, Hangzhou,
China, 21-25 August 2017},
series = {Studies in Health Technology and Informatics},
volume = {245},
pages = {1218},
publisher = {{IOS} Press},
year = {2017},
url = {https://doi.org/10.3233/978-1-61499-830-3-1218},
doi = {10.3233/978-1-61499-830-3-1218},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/DuHDCT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/HuangZDDYMCT17,
author = {Jing Huang and
Xinyuan Zhang and
Jingcheng Du and
Rui Duan and
Liu Yang and
Jason H. Moore and
Yong Chen and
Cui Tao},
editor = {Adi V. Gundlapalli and
Marie{-}Christine Jaulent and
Dongsheng Zhao},
title = {Comparing Different Adverse Effects Among Multiple Drugs Using {FAERS}
Data},
booktitle = {{MEDINFO} 2017: Precision Healthcare through Informatics - Proceedings
of the 16th World Congress on Medical and Health Informatics, Hangzhou,
China, 21-25 August 2017},
series = {Studies in Health Technology and Informatics},
volume = {245},
pages = {1268},
publisher = {{IOS} Press},
year = {2017},
url = {https://doi.org/10.3233/978-1-61499-830-3-1268},
doi = {10.3233/978-1-61499-830-3-1268},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/HuangZDDYMCT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/TaoHA16,
author = {Cui Tao and
Yongqun He and
Sivaram Arabandi},
title = {Vaccine and Drug Ontology Studies {(VDOS} 2014)},
journal = {J. Biomed. Semant.},
volume = {7},
pages = {6},
year = {2016},
url = {https://doi.org/10.1186/s13326-015-0039-8},
doi = {10.1186/S13326-015-0039-8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/TaoHA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ZhangWDXWTLX16,
author = {Yaoyun Zhang and
Heng{-}Yi Wu and
Jingcheng Du and
Jun Xu and
Jingqi Wang and
Cui Tao and
Lang Li and
Hua Xu},
title = {Extracting drug-enzyme relation from literature as evidence for drug
drug interaction},
journal = {J. Biomed. Semant.},
volume = {7},
pages = {11},
year = {2016},
url = {https://doi.org/10.1186/s13326-016-0052-6},
doi = {10.1186/S13326-016-0052-6},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ZhangWDXWTLX16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/DuCCT16,
author = {Jingcheng Du and
Yi Cai and
Yong Chen and
Cui Tao},
title = {Trivalent influenza vaccine adverse symptoms analysis based on MedDRA
terminology using {VAERS} data in 2011},
journal = {J. Biomed. Semant.},
volume = {7},
pages = {13},
year = {2016},
url = {https://doi.org/10.1186/s13326-016-0056-2},
doi = {10.1186/S13326-016-0056-2},
timestamp = {Wed, 09 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/DuCCT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ZhangWDXWTLX16a,
author = {Yaoyun Zhang and
Heng{-}Yi Wu and
Jingcheng Du and
Jun Xu and
Jingqi Wang and
Cui Tao and
Lang Li and
Hua Xu},
title = {Erratum to: Extracting drug-enzyme relation from literature as evidence
for drug drug interaction},
journal = {J. Biomed. Semant.},
volume = {7},
pages = {21},
year = {2016},
url = {https://doi.org/10.1186/s13326-016-0063-3},
doi = {10.1186/S13326-016-0063-3},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ZhangWDXWTLX16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/MadkourBT16,
author = {Mohcine Madkour and
Driss Benhaddou and
Cui Tao},
title = {Temporal data representation, normalization, extraction, and reasoning:
{A} review from clinical domain},
journal = {Comput. Methods Programs Biomed.},
volume = {128},
pages = {52--68},
year = {2016},
url = {https://doi.org/10.1016/j.cmpb.2016.02.007},
doi = {10.1016/J.CMPB.2016.02.007},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmpb/MadkourBT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/GretheOXCLSGKCJ16,
author = {Jeffrey S. Grethe and
Ibrahim Burak {\"{O}}zyurt and
Hua Xu and
Xiaoling Chen and
Ruiling Liu and
Ergin Soysal and
Anupama E. Gururaj and
Hyeon{-}Eui Kim and
Trevor Cohen and
Todd R. Johnson and
Mandana Salimi and
Saeid Pournejati and
Min Jiang and
Claudiu Farcas and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Philippe Rocca{-}Serra and
Muhamamd F. Amith and
Cui Tao and
Ian Fore and
Ronald Margolis and
George Alter and
Susanna{-}Assunta Sansone and
Lucila Ohno{-}Machado},
title = {A Scalable Dataset Indexing Infrastructure for the bioCADDIE Data
Discovery System},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2500116-1.3364063/2500305-1.3364058},
timestamp = {Wed, 17 Apr 2024 11:47:32 +0200},
biburl = {https://dblp.org/rec/conf/amia/GretheOXCLSGKCJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/XuGCLSGLOKCJSPJ16,
author = {Hua Xu and
Jeffrey S. Grethe and
Xiaoling Chen and
Ruiling Liu and
Ergin Soysal and
Anupama E. Gururaj and
Yueling Li and
Ibrahim Burak {\"{O}}zyurt and
Hyeon{-}Eui Kim and
Trevor Cohen and
Todd R. Johnson and
Mandana Salimi and
Saeid Pournejati and
Min Jiang and
Claudiu Farcas and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Philippe Rocca{-}Serra and
Muhamamd F. Amith and
Cui Tao and
Ian Fore and
Ronald Margolis and
George Alter and
Susanna{-}Assunta Sansone and
Lucila Ohno{-}Machado},
title = {Development of DataMed, a Data Discovery Index Prototype by bioCADDIE:
Laying the Groundwork for Biomedical Data Discovery},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t008-1.3362585/f008-1.3362586/2496904-1.3362592/2500199-1.3362587},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/XuGCLSGLOKCJSPJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/MadkourSDT16,
author = {Mohcine Madkour and
Hsing{-}yi Song and
Jingcheng Du and
Cui Tao},
editor = {Tianhai Tian and
Qinghua Jiang and
Yunlong Liu and
Kevin Burrage and
Jiangning Song and
Yadong Wang and
Xiaohua Hu and
Shinichi Morishita and
Qian Zhu and
Guohua Wang},
title = {A representational analysis of a temporal indeterminancy display in
clinical events},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2016, Shenzhen, China, December 15-18, 2016},
pages = {1089--1095},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/BIBM.2016.7822673},
doi = {10.1109/BIBM.2016.7822673},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/MadkourSDT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/LiangST16,
author = {Chen Liang and
Jingchun Sun and
Cui Tao},
title = {Semantic Web Ontology and Data Integration: a Case Study in Aiding
Psychiatric Drug Repurposing},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2016, San Francisco,
CA, USA, March 21-24, 2016},
publisher = {{AMIA}},
year = {2016},
url = {http://knowledge.amia.org/amia-59309-cri2016-1.3011827/t003-1.3012832/f003-1.3012833/a025-1.3012915/a026-1.3012910},
timestamp = {Wed, 20 Jun 2018 17:09:02 +0200},
biburl = {https://dblp.org/rec/conf/cri/LiangST16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ni/WangCBAT16,
author = {Dennis Wang and
Rachel Cunningham and
Julie Boom and
Muhammad Amith and
Cui Tao},
editor = {Walter Sermeus and
Paula M. Procter and
Patrick Weber},
title = {Towards a {HPV} Vaccine Knowledgebase for Patient Education Content},
booktitle = {Nursing Informatics 2016 - eHealth for All: Every Level Collaboration
- From Project to Realization, Proceedings of the 13th International
Congress on Nursing Informatics, Geneva, Switzerland, June 25-29,
2016},
series = {Studies in Health Technology and Informatics},
volume = {225},
pages = {432--436},
publisher = {{IOS} Press},
year = {2016},
url = {https://doi.org/10.3233/978-1-61499-658-3-432},
doi = {10.3233/978-1-61499-658-3-432},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ni/WangCBAT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/semweb/2016bmdid,
editor = {Cui Tao and
Guoqian Jiang and
Dezhao Song and
Jeff Heflin and
Frank Schilder},
title = {Proceedings of the First International Workshop on Biomedical Data
Integration and Discovery {(BMDID} 2016) co-located with The 15th
International Semantic Web Conference {(ISWC} 2016), Kobe, Japan,
October 17, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1709},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1709},
urn = {urn:nbn:de:0074-1709-8},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/2016bmdid.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenZCTSXBLZJHB15,
author = {Guocai Chen and
Jieyi Zhao and
Trevor Cohen and
Cui Tao and
Jingchun Sun and
Hua Xu and
Elmer V. Bernstam and
Andrew Lawson and
Jia Zeng and
Amber M. Johnson and
Vijaykumar Holla and
Ann M. Bailey and
Humberto Lara{-}Guerra and
Beate Litzenburger and
Funda Meric{-}Bernstam and
W. Jim Zheng},
title = {Using Ontology Fingerprints to disambiguate gene name entities in
the biomedical literature},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav034},
doi = {10.1093/DATABASE/BAV034},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenZCTSXBLZJHB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TaoSZCX15,
author = {Cui Tao and
Jingchun Sun and
W. Jim Zheng and
Junjie Chen and
Hua Xu},
title = {Colorectal cancer drug target prediction using ontology-based inference
and network analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2015},
year = {2015},
url = {https://doi.org/10.1093/database/bav015},
doi = {10.1093/DATABASE/BAV015},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TaoSZCX15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/AmithGCBT15,
author = {Muhammad Amith and
Yang Gong and
Rachel Cunningham and
Julie Boom and
Cui Tao},
title = {Developing {VISO:} Vaccine Information Statement Ontology for patient
education},
journal = {J. Biomed. Semant.},
volume = {6},
pages = {23},
year = {2015},
url = {https://doi.org/10.1186/s13326-015-0016-2},
doi = {10.1186/S13326-015-0016-2},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/AmithGCBT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ZhangWLT15,
author = {Yuji Zhang and
Puqiang Wu and
Yi Luo and
Cui Tao},
title = {Identification of sex-associated network patterns in Vaccine-Adverse
Event Association Network in {VAERS}},
journal = {J. Biomed. Semant.},
volume = {6},
pages = {33},
year = {2015},
url = {https://doi.org/10.1186/s13326-015-0032-2},
doi = {10.1186/S13326-015-0032-2},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ZhangWLT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Legaz-GarciaTFC15,
author = {Mar{\'{\i}}a Del Carmen Legaz{-}Garc{\'{\i}}a and
Marcos Men{\'{a}}rguez Tortosa and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis and
Christopher G. Chute and
Cui Tao},
title = {Transformation of standardized clinical models based on {OWL} technologies:
from {CEM} to OpenEHR archetypes},
journal = {J. Am. Medical Informatics Assoc.},
volume = {22},
number = {3},
pages = {536--544},
year = {2015},
url = {https://doi.org/10.1093/jamia/ocu027},
doi = {10.1093/JAMIA/OCU027},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/Legaz-GarciaTFC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ButlerMBT15,
author = {Keith A. Butler and
Eric Mercer and
Ali Bahrami and
Cui Tao},
title = {Model Checking for Verification of Interactive Health {IT} Systems},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2248920-1.2745810/2246148-1.2745807},
timestamp = {Wed, 17 Apr 2024 11:47:40 +0200},
biburl = {https://dblp.org/rec/conf/amia/ButlerMBT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/JiangSPTWC15,
author = {Guoqian Jiang and
Harold R. Solbrig and
Eric Prud'hommeaux and
Cui Tao and
Chunhua Weng and
Christopher G. Chute},
title = {Quality Assurance of Cancer Study Common Data Elements Using {A} Post-Coordination
Approach},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2243651-1.2745705/2247514-1.2745702},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/JiangSPTWC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LongHT15,
author = {Jie Long and
Nathan C. Hulse and
Cui Tao},
title = {Analysis of empty responses from electronic resources in infobutton
managers},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2246320-1.2745645/2249243-1.2745642},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LongHT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/MyneniAGT15,
author = {Sahiti Myneni and
Muhammad Amith and
Yimin Geng and
Cui Tao},
editor = {Indra Neil Sarkar and
Andrew Georgiou and
Paulo Mazzoncini de Azevedo Marques},
title = {Towards an Ontology-driven Framework to Enable Development of Personalized
mHealth Solutions for Cancer Survivors' Engagement in Healthy Living},
booktitle = {{MEDINFO} 2015: eHealth-enabled Health - Proceedings of the 15th World
Congress on Health and Biomedical Informatics, S{\~{a}}o Paulo, Brazil,
19-23 August 2015},
series = {Studies in Health Technology and Informatics},
volume = {216},
pages = {113--117},
publisher = {{IOS} Press},
year = {2015},
url = {https://doi.org/10.3233/978-1-61499-564-7-113},
doi = {10.3233/978-1-61499-564-7-113},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/MyneniAGT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/LiangST15,
author = {Chen Liang and
Jingchun Sun and
Cui Tao},
editor = {Indra Neil Sarkar and
Andrew Georgiou and
Paulo Mazzoncini de Azevedo Marques},
title = {Semantic Web Ontology and Data Integration: a Case Study in Aiding
Psychiatric Drug Repurposing},
booktitle = {{MEDINFO} 2015: eHealth-enabled Health - Proceedings of the 15th World
Congress on Health and Biomedical Informatics, S{\~{a}}o Paulo, Brazil,
19-23 August 2015},
series = {Studies in Health Technology and Informatics},
volume = {216},
pages = {1051},
publisher = {{IOS} Press},
year = {2015},
url = {https://doi.org/10.3233/978-1-61499-564-7-1051},
doi = {10.3233/978-1-61499-564-7-1051},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/LiangST15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/TaoDCC15,
author = {Cui Tao and
Jingcheng Du and
Yi Cai and
Yong Chen},
editor = {Indra Neil Sarkar and
Andrew Georgiou and
Paulo Mazzoncini de Azevedo Marques},
title = {Trivalent Influenza Vaccine Adverse Event Analysis Based On MedDRA
System Organ Classes Using {VAERS} Data},
booktitle = {{MEDINFO} 2015: eHealth-enabled Health - Proceedings of the 15th World
Congress on Health and Biomedical Informatics, S{\~{a}}o Paulo, Brazil,
19-23 August 2015},
series = {Studies in Health Technology and Informatics},
volume = {216},
pages = {1076},
publisher = {{IOS} Press},
year = {2015},
url = {https://doi.org/10.3233/978-1-61499-564-7-1076},
doi = {10.3233/978-1-61499-564-7-1076},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/TaoDCC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/AmithT15,
author = {Muhammad Amith and
Cui Tao},
editor = {Dezhao Song and
Adam Fermier and
Cui Tao and
Frank Schilder},
title = {A Web Application Towards Semiotic-based Evaluation of Biomedical
Ontologies},
booktitle = {Proceedings of International Workshop on Biomedical Data Mining, Modeling,
and Semantic Integration: {A} Promising Approach to Solving Unmet
Medical Needs {(BDM2I2015)} co-located with The 14th International
Semantic Web Conference {(ISWC} 2015), Bethlehem, United States, October
11th, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1428},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1428/BDM2I\_2015\_paper\_5.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:07 +0100},
biburl = {https://dblp.org/rec/conf/semweb/AmithT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/semweb/2015bdm2i,
editor = {Dezhao Song and
Adam Fermier and
Cui Tao and
Frank Schilder},
title = {Proceedings of International Workshop on Biomedical Data Mining, Modeling,
and Semantic Integration: {A} Promising Approach to Solving Unmet
Medical Needs {(BDM2I2015)} co-located with The 14th International
Semantic Web Conference {(ISWC} 2015), Bethlehem, United States, October
11th, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1428},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1428},
urn = {urn:nbn:de:0074-1428-8},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/2015bdm2i.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodatamining/TaoWLZ14,
author = {Cui Tao and
Puqiang Wu and
Yi Luo and
Yuji Zhang},
title = {Linked vaccine adverse event data from {VAERS} for biomedical data
analysis and longitudinal studies},
journal = {BioData Min.},
volume = {7},
pages = {36},
year = {2014},
url = {https://doi.org/10.1186/s13040-014-0036-y},
doi = {10.1186/S13040-014-0036-Y},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodatamining/TaoWLZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/TaoHA14,
author = {Cui Tao and
Yongqun He and
Sivaram Arabandi},
title = {A 2013 workshop: vaccine and drug ontology studies {(VDOS} 2013)},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {16},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-16},
doi = {10.1186/2041-1480-5-16},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/TaoHA14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/HeSLXGZJTTS14,
author = {Yongqun He and
Sirarat Sarntivijai and
Yu Lin and
Zuoshuang Xiang and
Abra Guo and
Shelley Zhang and
Desikan Jagannathan and
Luca Toldo and
Cui Tao and
Barry Smith},
title = {{OAE:} The Ontology of Adverse Events},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {29},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-29},
doi = {10.1186/2041-1480-5-29},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biomedsem/HeSLXGZJTTS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ZhangTJNSCL14,
author = {Yuji Zhang and
Cui Tao and
Guoqian Jiang and
Asha A. Nair and
Jian Su and
Christopher G. Chute and
Hongfang Liu},
title = {Network-based analysis reveals distinct association patterns in a
semantic MEDLINE-based drug-disease-gene network},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {33},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-33},
doi = {10.1186/2041-1480-5-33},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ZhangTJNSCL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ClarkSQCT14,
author = {Kimberly Clark and
Deepak K. Sharma and
Rui Qin and
Christopher G. Chute and
Cui Tao},
title = {A use case study on late stent thrombosis for ontology-based temporal
reasoning and analysis},
journal = {J. Biomed. Semant.},
volume = {5},
pages = {49},
year = {2014},
url = {https://doi.org/10.1186/2041-1480-5-49},
doi = {10.1186/2041-1480-5-49},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ClarkSQCT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HarringtonTBZ14,
author = {Craig Harrington and
Cui Tao and
Keith A. Butler and
Jiajie Zhang},
title = {Enhancing the {TURF} Framework with a Workflow Ontology},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-001-1.1545410/f-001-1.1545411/a-027-1.1545598/a-028-1.1545595},
timestamp = {Wed, 17 Apr 2024 11:47:48 +0200},
biburl = {https://dblp.org/rec/conf/amia/HarringtonTBZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HulseLXT14,
author = {Nathan C. Hulse and
Jie Long and
Xiaomin Xu and
Cui Tao},
title = {Enabling Locally-Developed Content For Access Through the Infobutton
By Means of Automated Concept Annotation},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-004-1.1544972/f-004-1.1544973/a-167-1.1545172/a-168-1.1545169},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/HulseLXT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SunTZZCX14,
author = {Jingchun Sun and
Cui Tao and
Kevin W. Zhu and
W. Jim Zheng and
Junjie Chen and
Hua Xu},
title = {An Integrative Framework for Drug Target Prediction and Repurposing},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-530-1.1544081/a-531-1.1544078},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/SunTZZCX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bhi/ShenLLLPCT14,
author = {Feichen Shen and
Dingcheng Li and
Hongfang Liu and
Yugyung Lee and
Jyotishman Pathak and
Christopher G. Chute and
Cui Tao},
title = {Using semantic web technologies for quality measure phenotyping algorithm
representation and automatic execution on {EHR} data},
booktitle = {Proceedings of {IEEE-EMBS} International Conference on Biomedical
and Health Informatics, {BHI} 2014, Valencia, Spain, June 1-4, 2014},
pages = {531--534},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/BHI.2014.6864419},
doi = {10.1109/BHI.2014.6864419},
timestamp = {Wed, 16 Oct 2019 14:14:51 +0200},
biburl = {https://dblp.org/rec/conf/bhi/ShenLLLPCT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdataconf/ZhuT14,
author = {Qian Zhu and
Cui Tao},
editor = {Jimmy Lin and
Jian Pei and
Xiaohua Hu and
Wo Chang and
Raghunath Nambiar and
Charu C. Aggarwal and
Nick Cercone and
Vasant G. Honavar and
Jun Huan and
Bamshad Mobasher and
Saumyadipta Pyne},
title = {Pharmacological class data representation in the Web Ontology Language
{(OWL)}},
booktitle = {2014 {IEEE} International Conference on Big Data {(IEEE} BigData 2014),
Washington, DC, USA, October 27-30, 2014},
pages = {77--84},
publisher = {{IEEE} Computer Society},
year = {2014},
url = {https://doi.org/10.1109/BigData.2014.7004397},
doi = {10.1109/BIGDATA.2014.7004397},
timestamp = {Mon, 21 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bigdataconf/ZhuT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChenZCTSXBZJHBM14,
author = {Guocai Chen and
Jieyi Zhao and
Trevor Cohen and
Cui Tao and
Jingchun Sun and
Hua Xu and
Elmer V. Bernstam and
Jia Zeng and
Amber M. Johnson and
Vijaykumar Holla and
Ann Balley and
Funda Meric{-}Bernstam and
W. Jim Zheng},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Using Ontology Fingerprints to Disambiguate Gene Name Entities in
the Biomedical Literature},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {66},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_22.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChenZCTSXBZJHBM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TaoSZCX14,
author = {Cui Tao and
Jingchun Sun and
W. Jim Zheng and
Junjie Chen and
Hua Xu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Drug Target Prediction for Colorectal Cancer by Combining Ontology
and Network Approaches},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {67},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TaoSZCX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhuT14,
author = {Qian Zhu and
Cui Tao},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Pharmacological Class Data Representation in the Web Ontology Language
{(OWL)}},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {68--69},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhuT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AmithT14,
author = {Muhammad Amith and
Cui Tao},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {An Initial Framework for an Ontology-based Mobile Application for
Vaccine Information Retrieval and Education},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {81--83},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_53.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AmithT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhangWTX14,
author = {Yaoyun Zhang and
Jingqi Wang and
Cui Tao and
Hua Xu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Ontology-based Normalization for Disease-Lab test Relation Extraction},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {87--89},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhangWTX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icsh/AmithT14,
author = {Muhammad Amith and
Cui Tao},
editor = {Xiaolong Zheng and
Daniel Zeng and
Hsinchun Chen and
Yong Zhang and
Chunxiao Xing and
Daniel B. Neill},
title = {A Prototype Mobile Virtual Assistant for Semantic-Based Vaccine Information
Retrieval},
booktitle = {Smart Health - International Conference, {ICSH} 2014, Beijing, China,
July 10-11, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8549},
pages = {200--205},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08416-9\_21},
doi = {10.1007/978-3-319-08416-9\_21},
timestamp = {Mon, 15 May 2023 16:24:40 +0200},
biburl = {https://dblp.org/rec/conf/icsh/AmithT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/TaoWZ14,
author = {Cui Tao and
Puqiang Wu and
Yuji Zhang},
editor = {Wen{-}Chih Peng and
Haixun Wang and
James Bailey and
Vincent S. Tseng and
Tu Bao Ho and
Zhi{-}Hua Zhou and
Arbee L. P. Chen},
title = {Linked Vaccine Adverse Event Data Representation from {VAERS} for
Biomedical Informatics Research},
booktitle = {Trends and Applications in Knowledge Discovery and Data Mining - {PAKDD}
2014 International Workshops: DANTH, BDM, MobiSocial, BigEC, CloudSD,
MSMV-MBI, SDA, DMDA-Health, ALSIP, SocNet, DMBIH, BigPMA,Tainan, Taiwan,
May 13-16, 2014. Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {8643},
pages = {652--661},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-13186-3\_58},
doi = {10.1007/978-3-319-13186-3\_58},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pakdd/TaoWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/ZhuTSC14,
author = {Qian Zhu and
Cui Tao and
Feichen Shen and
Christopher G. Chute},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein and
Marylyn D. Ritchie},
title = {Exploring the Pharmacogenomics Knowledge Base (PharmGKB) for Repositioning
Breast Cancer Drugs by Leveraging Web Ontology Language {(OWL)} and
Cheminformatics Approaches},
booktitle = {Biocomputing 2014: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, January 3-7, 2014},
pages = {172--182},
year = {2014},
url = {http://psb.stanford.edu/psb-online/proceedings/psb14/zhu.pdf},
timestamp = {Mon, 21 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/ZhuTSC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/JiangSSTWC14,
author = {Guoqian Jiang and
Deepak K. Sharma and
Harold R. Solbrig and
Cui Tao and
Chunhua Weng and
Christopher G. Chute},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {Building a Semantic Web-based Metadata Repository for Facilitating
Detailed Clinical Modeling in Cancer Genome Studies},
booktitle = {Proceedings of the 7th International Workshop on Semantic Web Applications
and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1320},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1320/paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/JiangSSTWC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/TaoOMMRKZF14,
author = {Cui Tao and
Nnaemeka Okafor and
Amit M. Mehta and
Charles L. Maddow and
David J. Robinson and
Brent King and
Jiajie Zhang and
Amy Franklin},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {A Work Domain Ontology for Modeling Emergency Department Workflow},
booktitle = {Proceedings of the 7th International Workshop on Semantic Web Applications
and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1320},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1320/paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/TaoOMMRKZF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/ZhengDTT14,
author = {W. Jim Zheng and
Jingcheng Du and
Jijun Tang and
Cui Tao},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {{GSO:} {A} Semantic Web Ontology to Capture 3D Genome Structure},
booktitle = {Proceedings of the 7th International Workshop on Semantic Web Applications
and Tools for Life Sciences, Berlin, Germany, December 9-11, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1320},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1320/paper\_24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/ZhengDTT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/ZhangTHKL13,
author = {Yuji Zhang and
Cui Tao and
Yongqun He and
Pradip Kanjamala and
Hongfang Liu},
title = {Network-based analysis of vaccine-related associations reveals consistent
knowledge with the vaccine ontology},
journal = {J. Biomed. Semant.},
volume = {4},
pages = {33},
year = {2013},
url = {https://doi.org/10.1186/2041-1480-4-33},
doi = {10.1186/2041-1480-4-33},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/ZhangTHKL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/TaoJOFZSPHC13,
author = {Cui Tao and
Guoqian Jiang and
Thomas A. Oniki and
Robert R. Freimuth and
Qian Zhu and
Deepak K. Sharma and
Jyotishman Pathak and
Stanley M. Huff and
Christopher G. Chute},
title = {A semantic-web oriented representation of the clinical element model
for secondary use of electronic health records data},
journal = {J. Am. Medical Informatics Assoc.},
volume = {20},
number = {3},
pages = {554--562},
year = {2013},
url = {https://doi.org/10.1136/amiajnl-2012-001326},
doi = {10.1136/AMIAJNL-2012-001326},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/TaoJOFZSPHC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/SohnWLJTEL13,
author = {Sunghwan Sohn and
Kavishwar B. Wagholikar and
Dingcheng Li and
Siddhartha Jonnalagadda and
Cui Tao and
Ravikumar Komandur Elayavilli and
Hongfang Liu},
title = {Comprehensive temporal information detection from clinical text: medical
events, time, and {TLINK} identification},
journal = {J. Am. Medical Informatics Assoc.},
volume = {20},
number = {5},
pages = {836--842},
year = {2013},
url = {https://doi.org/10.1136/amiajnl-2013-001622},
doi = {10.1136/AMIAJNL-2013-001622},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/SohnWLJTEL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/TaoPSWC13,
author = {Cui Tao and
Jyotishman Pathak and
Harold R. Solbrig and
Wei{-}Qi Wei and
Christopher G. Chute},
title = {Terminology representation guidelines for biomedical ontologies in
the semantic web notations},
journal = {J. Biomed. Informatics},
volume = {46},
number = {1},
pages = {128--138},
year = {2013},
url = {https://doi.org/10.1016/j.jbi.2012.09.003},
doi = {10.1016/J.JBI.2012.09.003},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/TaoPSWC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/ZhuFLBPTDC13,
author = {Qian Zhu and
Robert R. Freimuth and
Zonghui Lian and
Scott Bauer and
Jyotishman Pathak and
Cui Tao and
Matthew J. Durski and
Christopher G. Chute},
title = {Harmonization and semantic annotation of data dictionaries from the
Pharmacogenomics Research Network: {A} case study},
journal = {J. Biomed. Informatics},
volume = {46},
number = {2},
pages = {286--293},
year = {2013},
url = {https://doi.org/10.1016/j.jbi.2012.11.004},
doi = {10.1016/J.JBI.2012.11.004},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/ZhuFLBPTDC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/TaoSSC13,
author = {Cui Tao and
Dezhao Song and
Deepak K. Sharma and
Christopher G. Chute},
title = {Semantator: Semantic annotator for converting biomedical text to linked
data},
journal = {J. Biomed. Informatics},
volume = {46},
number = {5},
pages = {882--893},
year = {2013},
url = {https://doi.org/10.1016/j.jbi.2013.07.003},
doi = {10.1016/J.JBI.2013.07.003},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/TaoSSC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HulseLT13,
author = {Nathan C. Hulse and
Jie Long and
Cui Tao},
title = {Combining Infobuttons and Semantic Web Rules for Identifying Patterns
and Delivering Highly-Personalized Education Materials},
booktitle = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2013},
publisher = {{AMIA}},
year = {2013},
url = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-05-1.583941/f-005-1.583942/a-213-1.584164/a-215-1.584161},
timestamp = {Wed, 17 Apr 2024 11:47:55 +0200},
biburl = {https://dblp.org/rec/conf/amia/HulseLT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LiWTCL13,
author = {Dingcheng Li and
Liwei Wang and
Cui Tao and
Christopher G. Chute and
Hongfang Liu},
title = {Coreference Resolution from Medical Corpus with Topic Modeling},
booktitle = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2013},
publisher = {{AMIA}},
year = {2013},
url = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-06-1.582200/f-006-1.582201/a-299-1.583088/a-300-1.583082},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LiWTCL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LongHTF13,
author = {Jie Long and
Nathan C. Hulse and
Cui Tao and
Guilherme Del Fiol},
title = {Adding Search Engine Functionality to Infobutton Manager Platform},
booktitle = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2013},
publisher = {{AMIA}},
year = {2013},
url = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-02-1.584671/f-002-1.584672/a-303-1.584811/a-314-1.584808},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LongHTF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/TaoSSPEBSC13,
author = {Cui Tao and
Harold R. Solbrig and
Craig Stancl and
Kevin J. Peterson and
Cory M. Endle and
Scott Bauer and
Deepak K. Sharma and
Christopher G. Chute},
title = {Introduction and Implementation of Common Terminology Services 2 {(CTS2)}},
booktitle = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2013},
publisher = {{AMIA}},
year = {2013},
url = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-06-1.582200/f-006-1.582201/a-509-1.582452/a-510-1.582448},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/TaoSSPEBSC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhangLTSL13,
author = {Yuji Zhang and
Dingcheng Li and
Cui Tao and
Feichen Shen and
Hongfang Liu},
editor = {Guo{-}Zheng Li and
Sunghoon Kim and
Michael Hughes and
Geoffrey J. McLachlan and
Hongye Sun and
Xiaohua Hu and
Habtom W. Ressom and
Baoyan Liu and
Michael N. Liebman},
title = {An integrative computational approach to identify disease-specific
networks from PubMed literature information},
booktitle = {2013 {IEEE} International Conference on Bioinformatics and Biomedicine,
Shanghai, China, December 18-21, 2013},
pages = {72--75},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/BIBM.2013.6732738},
doi = {10.1109/BIBM.2013.6732738},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhangLTSL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhangTHKL13,
author = {Yuji Zhang and
Cui Tao and
Yongqun He and
Pradip Kanjamala and
Hongfang Liu},
editor = {Cui Tao and
Yongqun He and
Luca Toldo and
Sivaram Arabandi and
Selja Sepp{\"{a}}l{\"{a}} and
Alan Ruttenberg},
title = {Analysis of Vaccine-related Networks using Semantic {MEDLINE} and
the Vaccine Ontology},
booktitle = {Proceedings of the {ICBO2013} Workshops: International Workshop on
Vaccine and Drug Ontology Studies {(VDOS} 2013), International Workshop
on Definitions in Ontologies {(DO} 2013), part of the Semantic Trilogy
2013 , Montreal, Quebec, Canada, July 6th - 12th 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1061},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1061/Paper6\_vdos2013.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhangTHKL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icsh/TaoLSLPLC13,
author = {Cui Tao and
Dingcheng Li and
Feichen Shen and
Zonghui Lian and
Jyotishman Pathak and
Hongfang Liu and
Christopher G. Chute},
editor = {Daniel Zeng and
Christopher C. Yang and
Vincent S. Tseng and
Chunxiao Xing and
Hsinchun Chen and
Fei{-}Yue Wang and
Xiaolong Zheng},
title = {Phenotyping on {EHR} Data Using {OWL} and Semantic Web Technologies},
booktitle = {Smart Health - International Conference, {ICSH} 2013, Beijing, China,
August 3-4, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8040},
pages = {31--32},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-39844-5\_5},
doi = {10.1007/978-3-642-39844-5\_5},
timestamp = {Mon, 15 May 2023 16:24:40 +0200},
biburl = {https://dblp.org/rec/conf/icsh/TaoLSLPLC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/Martinez-CostaBLTFSC13,
author = {Catalina Mart{\'{\i}}nez{-}Costa and
Diego Bosc{\'{a}} and
Mar{\'{\i}}a Del Carmen Legaz{-}Garc{\'{\i}}a and
Cui Tao and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis and
Stefan Schulz and
Christopher G. Chute},
editor = {Christoph Ulrich Lehmann and
Elske Ammenwerth and
Christian N{\o}hr},
title = {Isosemantic Rendering of Clinical Information Using Formal Ontologies
and {RDF}},
booktitle = {{MEDINFO} 2013 - Proceedings of the 14th World Congress on Medical
and Health Informatics, 20-13 August 2013, Copenhagen, Denmark},
series = {Studies in Health Technology and Informatics},
volume = {192},
pages = {1085},
publisher = {{IOS} Press},
year = {2013},
url = {https://doi.org/10.3233/978-1-61499-289-9-1085},
doi = {10.3233/978-1-61499-289-9-1085},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/Martinez-CostaBLTFSC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/ClarkSQCT13,
author = {Kimberly Clark and
Deepak K. Sharma and
Rui Qin and
Christopher G. Chute and
Cui Tao},
editor = {Adrian Paschke and
Albert Burger and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {Ontology-based Temporal Analysis for Medical Device Adverse Event
- {A} Use Case Study on Late Stent Thrombosis},
booktitle = {Proceedings of the 6th International Workshop on Semantic Web Applications
and Tools for Life Sciences, Edinburgh, UK, December 10, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1114},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1114/Session3\_Clark.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/ClarkSQCT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2013vdos,
editor = {Cui Tao and
Yongqun He and
Luca Toldo and
Sivaram Arabandi and
Selja Sepp{\"{a}}l{\"{a}} and
Alan Ruttenberg},
title = {Proceedings of the {ICBO2013} Workshops: International Workshop on
Vaccine and Drug Ontology Studies {(VDOS} 2013), International Workshop
on Definitions in Ontologies {(DO} 2013), part of the Semantic Trilogy
2013 , Montreal, Quebec, Canada, July 6th - 12th 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1061},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1061},
urn = {urn:nbn:de:0074-1061-3},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2013vdos.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/HeTBTA12,
author = {Yongqun He and
Luca Toldo and
Gully Burns and
Cui Tao and
Darrell R. Abernethy},
title = {A 2012 Workshop: Vaccine and Drug Ontology in the Study of Mechanism
and Effect {(VDOSME} 2012)},
journal = {J. Biomed. Semant.},
volume = {3},
pages = {12},
year = {2012},
url = {https://doi.org/10.1186/2041-1480-3-12},
doi = {10.1186/2041-1480-3-12},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/HeTBTA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/TaoHYGC12,
author = {Cui Tao and
Yongqun He and
Hannah Yang and
Gregory A. Poland and
Christopher G. Chute},
title = {Ontology-based time information representation of vaccine adverse
events in {VAERS} for temporal analysis},
journal = {J. Biomed. Semant.},
volume = {3},
pages = {13},
year = {2012},
url = {https://doi.org/10.1186/2041-1480-3-13},
doi = {10.1186/2041-1480-3-13},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/TaoHYGC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WuLLTMCS12,
author = {Stephen T. Wu and
Hongfang Liu and
Dingcheng Li and
Cui Tao and
Mark A. Musen and
Christopher G. Chute and
Nigam H. Shah},
title = {Unified Medical Language System term occurrences in clinical notes:
a large-scale corpus analysis},
journal = {J. Am. Medical Informatics Assoc.},
volume = {19},
number = {e1},
year = {2012},
url = {https://doi.org/10.1136/amiajnl-2011-000744},
doi = {10.1136/AMIAJNL-2011-000744},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/WuLLTMCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/ReaPSOWBTPHHC12,
author = {Susan Rea and
Jyotishman Pathak and
Guergana K. Savova and
Thomas A. Oniki and
Les Westberg and
Calvin E. Beebe and
Cui Tao and
Craig G. Parker and
Peter J. Haug and
Stanley M. Huff and
Christopher G. Chute},
title = {Building a robust, scalable and standards-driven infrastructure for
secondary use of {EHR} data: The SHARPn project},
journal = {J. Biomed. Informatics},
volume = {45},
number = {4},
pages = {763--771},
year = {2012},
url = {https://doi.org/10.1016/j.jbi.2012.01.009},
doi = {10.1016/J.JBI.2012.01.009},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/ReaPSOWBTPHHC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/TaoSKPSC12,
author = {Cui Tao and
Harold R. Solbrig and
Pradip Kanjamala and
Kevin J. Peterson and
Craig Stancle and
Christopher G. Chute},
title = {Common Terminology Services 2 {(CTS2)} for Biomedical Community},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-007-1.639272/f-001-1.639273/a-579-1.639456/a-580-1.639453},
timestamp = {Wed, 17 Apr 2024 11:48:03 +0200},
biburl = {https://dblp.org/rec/conf/amia/TaoSKPSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cgc/LiTLC12,
author = {Dingcheng Li and
Cui Tao and
Hongfang Liu and
Christopher G. Chute},
editor = {Jianxun Liu and
Jinjun Chen and
Guandong Xu},
title = {Ontology-Based Temporal Relation Modeling with MapReduce Latent Dirichlet
Allocations for Big {EHR} Data},
booktitle = {2012 Second International Conference on Cloud and Green Computing,
{CGC} 2012, Xiangtan, Hunan, China, November 1-3, 2012},
pages = {708--715},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/CGC.2012.112},
doi = {10.1109/CGC.2012.112},
timestamp = {Wed, 07 Aug 2024 10:36:47 +0200},
biburl = {https://dblp.org/rec/conf/cgc/LiTLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/LiuWTC12,
author = {Hongfang Liu and
Stephen T. Wu and
Cui Tao and
Christopher G. Chute},
editor = {Cui Tao and
Matt{-}Mouley Bouamrane},
title = {Modeling {UIMA} type system using web ontology language: towards interoperability
among UIMA-based {NLP} tools},
booktitle = {Proceedings of the 2nd International Workshop on Managing Interoperability
and compleXity in Health Systems, MIX-HS, Maui, HI, USA, October 29,
2012},
pages = {31--36},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2389672.2389679},
doi = {10.1145/2389672.2389679},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/LiuWTC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/BouamraneMT12,
author = {Matt{-}Mouley Bouamrane and
Frances S. Mair and
Cui Tao},
editor = {Cui Tao and
Matt{-}Mouley Bouamrane},
title = {An overview of electronic health information management systems quality
assessment},
booktitle = {Proceedings of the 2nd International Workshop on Managing Interoperability
and compleXity in Health Systems, MIX-HS, Maui, HI, USA, October 29,
2012},
pages = {37--46},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2389672.2389680},
doi = {10.1145/2389672.2389680},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/BouamraneMT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/TaoZJBC12,
author = {Cui Tao and
Yuji Zhang and
Guoqian Jiang and
Matt{-}Mouley Bouamrane and
Christopher G. Chute},
editor = {Cui Tao and
Matt{-}Mouley Bouamrane},
title = {Optimizing semantic {MEDLINE} for translational science studies using
semantic web technologies},
booktitle = {Proceedings of the 2nd International Workshop on Managing Interoperability
and compleXity in Health Systems, MIX-HS, Maui, HI, USA, October 29,
2012},
pages = {53--58},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2389672.2389683},
doi = {10.1145/2389672.2389683},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/TaoZJBC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/TaoB12,
author = {Cui Tao and
Matt{-}Mouley Bouamrane},
editor = {Xue{-}wen Chen and
Guy Lebanon and
Haixun Wang and
Mohammed J. Zaki},
title = {Managing interoperability and compleXity in health systems - MIXHS'12},
booktitle = {21st {ACM} International Conference on Information and Knowledge Management,
CIKM'12, Maui, HI, USA, October 29 - November 02, 2012},
pages = {2758--2759},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2396761.2398754},
doi = {10.1145/2396761.2398754},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/TaoB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hisb/TaoJOFPZSHC12,
author = {Cui Tao and
Guoqian Jiang and
Thomas A. Oniki and
Robert R. Freimuth and
Jyotishman Pathak and
Qian Zhu and
Deepak K. Sharma and
Stanley M. Huff and
Christopher G. Chute},
title = {A Semantic-Web Oriented Representation of Clinical Element Model for
Secondary Use of Electronic Healthcare Data},
booktitle = {2012 {IEEE} Second International Conference on Healthcare Informatics,
Imaging and Systems Biology, {HISB} 2012, La Jolla, CA, USA, September
27-28, 2012},
pages = {133},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/HISB.2012.58},
doi = {10.1109/HISB.2012.58},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hisb/TaoJOFPZSHC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ihi/TaoWCPSC12,
author = {Cui Tao and
Krist Wongsuphasawat and
Kimberly Clark and
Catherine Plaisant and
Ben Shneiderman and
Christopher G. Chute},
editor = {Gang Luo and
Jiming Liu and
Christopher C. Yang},
title = {Towards event sequence representation, reasoning and visualization
for {EHR} data},
booktitle = {{ACM} International Health Informatics Symposium, {IHI} '12, Miami,
FL, USA, January 28-30, 2012},
pages = {801--806},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2110363.2110461},
doi = {10.1145/2110363.2110461},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ihi/TaoWCPSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cikm/2012mixhs,
editor = {Cui Tao and
Matt{-}Mouley Bouamrane},
title = {Proceedings of the 2nd International Workshop on Managing Interoperability
and compleXity in Health Systems, MIX-HS, Maui, HI, USA, October 29,
2012},
publisher = {{ACM}},
year = {2012},
url = {http://dl.acm.org/citation.cfm?id=2389672},
isbn = {978-1-4503-1710-8},
timestamp = {Wed, 05 Dec 2012 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/2012mixhs.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aswc/TaoNSSMC11,
author = {Cui Tao and
Natalya Fridman Noy and
Harold R. Solbrig and
Nigam H. Shah and
Mark A. Musen and
Christopher G. Chute},
editor = {Jeff Z. Pan and
Huajun Chen and
Hong{-}Gee Kim and
Juanzi Li and
Zhe Wu and
Ian Horrocks and
Riichiro Mizoguchi and
Zhaohui Wu},
title = {Proposed {SKOS} Extensions for BioPortal Terminology Services},
booktitle = {The Semantic Web - Joint International Semantic Technology Conference,
{JIST} 2011, Hangzhou, China, December 4-7, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7185},
pages = {342--349},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-29923-0\_23},
doi = {10.1007/978-3-642-29923-0\_23},
timestamp = {Tue, 12 Apr 2022 14:46:29 +0200},
biburl = {https://dblp.org/rec/conf/aswc/TaoNSSMC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmei/ChenKWLT11,
author = {Wen Chen and
Lei Kong and
Yun Wu and
Xiaohui Liao and
Cui Tao},
editor = {Yongsheng Ding and
Yonghong Peng and
Riyi Shi and
Kuangrong Hao and
Lipo Wang},
title = {Wireless extensions of {CANBUS} in industrial applications},
booktitle = {4th International Conference on Biomedical Engineering and Informatics,
{BMEI} 2011, Shanghai, China, October 15-17, 2011},
pages = {2187--2191},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/BMEI.2011.6098693},
doi = {10.1109/BMEI.2011.6098693},
timestamp = {Wed, 16 Oct 2019 14:14:50 +0200},
biburl = {https://dblp.org/rec/conf/bmei/ChenKWLT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/BouamraneT11,
author = {Matt{-}Mouley Bouamrane and
Cui Tao},
editor = {Craig Macdonald and
Iadh Ounis and
Ian Ruthven},
title = {Managing interoperability and complexity inhealth systems: MIXHS'11
workshop summary},
booktitle = {Proceedings of the 20th {ACM} Conference on Information and Knowledge
Management, {CIKM} 2011, Glasgow, United Kingdom, October 24-28, 2011},
pages = {2635--2636},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/2063576.2064050},
doi = {10.1145/2063576.2064050},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cikm/BouamraneT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TaoJCSC11,
author = {Cui Tao and
Guoqian Jiang and
Kimberly Clark and
Deepak K. Sharma and
Christopher G. Chute},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Toward Answering Time-Related Questions from Adverse Event Reports
Using Ontology-Based Approaches},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper64.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TaoJCSC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/EmbleyLLST10,
author = {David W. Embley and
Stephen W. Liddle and
Deryle W. Lonsdale and
Aaron P. Stewart and
Cui Tao},
editor = {Juan Trujillo and
Gillian Dobbie and
Hannu Kangassalo and
Sven Hartmann and
Markus Kirchberg and
Matti Rossi and
Iris Reinhartz{-}Berger and
Esteban Zim{\'{a}}nyi and
Flavius Frasincar},
title = {{KBB:} {A} Knowledge-Bundle Builder for Research Studies},
booktitle = {Advances in Conceptual Modeling - Applications and Challenges, {ER}
2010 Workshops ACM-L, CMLSA, CMS, DE@ER, FP-UML, SeCoGIS, WISM, Vancouver,
BC, Canada, November 1-4, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6413},
pages = {148--157},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16385-2\_19},
doi = {10.1007/978-3-642-16385-2\_19},
timestamp = {Wed, 09 Jun 2021 08:38:38 +0200},
biburl = {https://dblp.org/rec/conf/er/EmbleyLLST10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/TaoSSWSC10,
author = {Cui Tao and
Harold R. Solbrig and
Deepak K. Sharma and
Wei{-}Qi Wei and
Guergana K. Savova and
Christopher G. Chute},
editor = {Peter F. Patel{-}Schneider and
Yue Pan and
Pascal Hitzler and
Peter Mika and
Lei Zhang and
Jeff Z. Pan and
Ian Horrocks and
Birte Glimm},
title = {Time-Oriented Question Answering from Clinical Narratives Using Semantic-Web
Techniques},
booktitle = {The Semantic Web - {ISWC} 2010 - 9th International Semantic Web Conference,
{ISWC} 2010, Shanghai, China, November 7-11, 2010, Revised Selected
Papers, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6497},
pages = {241--256},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-17749-1\_16},
doi = {10.1007/978-3-642-17749-1\_16},
timestamp = {Tue, 12 Apr 2022 14:46:29 +0200},
biburl = {https://dblp.org/rec/conf/semweb/TaoSSWSC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dke/TaoE09,
author = {Cui Tao and
David W. Embley},
title = {Automatic hidden-web table interpretation, conceptualization, and
semantic annotation},
journal = {Data Knowl. Eng.},
volume = {68},
number = {7},
pages = {683--703},
year = {2009},
url = {https://doi.org/10.1016/j.datak.2009.02.010},
doi = {10.1016/J.DATAK.2009.02.010},
timestamp = {Sat, 20 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/dke/TaoE09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/TaoEL09,
author = {Cui Tao and
David W. Embley and
Stephen W. Liddle},
editor = {Alberto H. F. Laender and
Silvana Castano and
Umeshwar Dayal and
Fabio Casati and
Jos{\'{e}} Palazzo Moreira de Oliveira},
title = {{FOCIH:} Form-Based Ontology Creation and Information Harvesting},
booktitle = {Conceptual Modeling - {ER} 2009, 28th International Conference on
Conceptual Modeling, Gramado, Brazil, November 9-12, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5829},
pages = {346--359},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04840-1\_26},
doi = {10.1007/978-3-642-04840-1\_26},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/er/TaoEL09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dagstuhl/EmbleyLT08,
author = {David W. Embley and
Stephen W. Liddle and
Cui Tao},
editor = {Roland H. Kaschek and
Lois M. L. Delcambre},
title = {A Web of Knowledge: {A} Conceptual-Modeling Perspective},
booktitle = {The Evolution of Conceptual Modeling - From a Historical Perspective
towards the Future of Conceptual Modeling [outcome of a Dagstuhl seminar
held 2008]},
series = {Lecture Notes in Computer Science},
volume = {6520},
pages = {137--160},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-642-17505-3\_7},
doi = {10.1007/978-3-642-17505-3\_7},
timestamp = {Tue, 14 May 2019 10:00:51 +0200},
biburl = {https://dblp.org/rec/conf/dagstuhl/EmbleyLT08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/EmbleyLLNTCCDJLLPPTWWZ08,
author = {David W. Embley and
Stephen W. Liddle and
Deryle W. Lonsdale and
George Nagy and
Yuri A. Tijerino and
Robert Clawson and
Jordan Crabtree and
Yihong Ding and
Piyushee Jha and
Zonghui Lian and
Stephen Lynn and
Raghav K. Padmanabhan and
Jeff Peters and
Cui Tao and
Robby Watts and
Charla Woodbury and
Andrew Zitzelberger},
editor = {Qing Li and
Stefano Spaccapietra and
Eric S. K. Yu and
Antoni Oliv{\'{e}}},
title = {A Conceptual-Model-Based Computational Alembic for a Web of Knowledge},
booktitle = {Conceptual Modeling - {ER} 2008, 27th International Conference on
Conceptual Modeling, Barcelona, Spain, October 20-24, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5231},
pages = {532--533},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-87877-3\_47},
doi = {10.1007/978-3-540-87877-3\_47},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/er/EmbleyLLNTCCDJLLPPTWWZ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/TaoE07a,
author = {Cui Tao and
David W. Embley},
editor = {Jean{-}Luc Hainaut and
Elke A. Rundensteiner and
Markus Kirchberg and
Michela Bertolotto and
Mathias Brochhausen and
Yi{-}Ping Phoebe Chen and
Samira Si{-}Said Cherfi and
Martin Doerr and
Hyoil Han and
Sven Hartmann and
Jeffrey Parsons and
Geert Poels and
Colette Rolland and
Juan Trujillo and
Eric S. K. Yu and
Esteban Zim{\'{a}}nyi},
title = {Seed-Based Generation of Personalized Bio-ontologies for Information
Extraction},
booktitle = {Advances in Conceptual Modeling - Foundations and Applications, {ER}
2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM,SeCoGIS, Auckland,
New Zealand, November 5-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4802},
pages = {74--84},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-76292-8\_9},
doi = {10.1007/978-3-540-76292-8\_9},
timestamp = {Wed, 09 Jun 2021 08:38:37 +0200},
biburl = {https://dblp.org/rec/conf/er/TaoE07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/TaoE07,
author = {Cui Tao and
David W. Embley},
editor = {Christine Parent and
Klaus{-}Dieter Schewe and
Veda C. Storey and
Bernhard Thalheim},
title = {Automatic Hidden-Web Table Interpretation by Sibling Page Comparison},
booktitle = {Conceptual Modeling - {ER} 2007, 26th International Conference on
Conceptual Modeling, Auckland, New Zealand, November 5-9, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4801},
pages = {566--581},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-75563-0\_38},
doi = {10.1007/978-3-540-75563-0\_38},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/er/TaoE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/TaoDL06,
author = {Cui Tao and
Yihong Ding and
Deryle W. Lonsdale},
editor = {John F. Roddick and
V. Richard Benjamins and
Samira Si{-}Said Cherfi and
Roger H. L. Chiang and
Christophe Claramunt and
Ramez Elmasri and
Fabio Grandi and
Hyoil Han and
Martin Hepp and
Miltiadis D. Lytras and
Vojislav B. Misic and
Geert Poels and
Il{-}Yeol Song and
Juan Trujillo and
Christelle Vangenot},
title = {Automatic Creation of Web Services from Extraction Ontologies},
booktitle = {Advances in Conceptual Modeling - Theory and Practice, {ER} 2006 Workshops
BP-UML, CoMoGIS, COSS, ECDM, OIS, QoIS, SemWAT, Tucson, AZ, USA, November
6-9, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4231},
pages = {415--424},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11908883\_49},
doi = {10.1007/11908883\_49},
timestamp = {Wed, 09 Jun 2021 08:38:37 +0200},
biburl = {https://dblp.org/rec/conf/er/TaoDL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/Tao06,
author = {Cui Tao},
editor = {Isabel F. Cruz and
Stefan Decker and
Dean Allemang and
Chris Preist and
Daniel Schwabe and
Peter Mika and
Michael Uschold and
Lora Aroyo},
title = {Toward Making Online Biological Data Machine Understandable},
booktitle = {The Semantic Web - {ISWC} 2006, 5th International Semantic Web Conference,
{ISWC} 2006, Athens, GA, USA, November 5-9, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4273},
pages = {992--993},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11926078\_83},
doi = {10.1007/11926078\_83},
timestamp = {Tue, 07 Sep 2021 13:48:11 +0200},
biburl = {https://dblp.org/rec/conf/semweb/Tao06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dke/EmbleyTL05,
author = {David W. Embley and
Cui Tao and
Stephen W. Liddle},
title = {Automating the extraction of data from {HTML} tables with unknown
structure},
journal = {Data Knowl. Eng.},
volume = {54},
number = {1},
pages = {3--28},
year = {2005},
url = {https://doi.org/10.1016/j.datak.2004.10.004},
doi = {10.1016/J.DATAK.2004.10.004},
timestamp = {Sat, 20 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/dke/EmbleyTL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijait/TaoZ03,
author = {Cui Tao and
Taiyi Zhang},
title = {Speaker-independent speech recognition based on fast neural network},
journal = {Int. J. Artif. Intell. Tools},
volume = {12},
number = {4},
pages = {481--487},
year = {2003},
url = {https://doi.org/10.1142/S0218213003001320},
doi = {10.1142/S0218213003001320},
timestamp = {Tue, 12 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijait/TaoZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/er/EmbleyTL02,
author = {David W. Embley and
Cui Tao and
Stephen W. Liddle},
editor = {Stefano Spaccapietra and
Salvatore T. March and
Yahiko Kambayashi},
title = {Automatically Extracting Ontologically Specified Data from {HTML}
Tables of Unknown Structure},
booktitle = {Conceptual Modeling - {ER} 2002, 21st International Conference on
Conceptual Modeling, Tampere, Finland, October 7-11, 2002, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2503},
pages = {322--337},
publisher = {Springer},
year = {2002},
url = {https://doi.org/10.1007/3-540-45816-6\_32},
doi = {10.1007/3-540-45816-6\_32},
timestamp = {Tue, 14 May 2019 10:00:50 +0200},
biburl = {https://dblp.org/rec/conf/er/EmbleyTL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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