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ORCIDBibTeX records: Luke V. Rasmussen
@article{DBLP:journals/jamia/BrandtKLPWHHLSWWCCLCKCDRWPWRSR23,
author = {Pascal S. Brandt and
Abel N. Kho and
Yuan Luo and
Jennifer A. Pacheco and
Theresa L. Walunas and
Hakon Hakonarson and
George Hripcsak and
Cong Liu and
Ning Shang and
Chunhua Weng and
Nephi Walton and
David S. Carrell and
Paul K. Crane and
Eric B. Larson and
Christopher G. Chute and
Iftikhar J. Kullo and
Robert J. Carroll and
Joshua C. Denny and
Andrea H. Ramirez and
Wei{-}Qi Wei and
Jyotishman Pathak and
Laura K. Wiley and
Rachel L. Richesson and
Justin B. Starren and
Luke V. Rasmussen},
title = {Characterizing variability of electronic health record-driven phenotype
definitions},
journal = {J. Am. Medical Informatics Assoc.},
volume = {30},
number = {3},
pages = {427--437},
year = {2023},
url = {https://doi.org/10.1093/jamia/ocac235},
doi = {10.1093/JAMIA/OCAC235},
timestamp = {Tue, 28 Mar 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/BrandtKLPWHHLSWWCCLCKCDRWPWRSR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/MaoXRLAPBVSJWPL23,
author = {Chengsheng Mao and
Jie Xu and
Luke V. Rasmussen and
Yikuan Li and
Prakash Adekkanattu and
Jennifer A. Pacheco and
Borna Bonakdarpour and
Robert Vassar and
Li Shen and
Guoqian Jiang and
Fei Wang and
Jyotishman Pathak and
Yuan Luo},
title = {{AD-BERT:} Using pre-trained language model to predict the progression
from mild cognitive impairment to Alzheimer's disease},
journal = {J. Biomed. Informatics},
volume = {144},
pages = {104442},
year = {2023},
url = {https://doi.org/10.1016/j.jbi.2023.104442},
doi = {10.1016/J.JBI.2023.104442},
timestamp = {Fri, 01 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/MaoXRLAPBVSJWPL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/BrandtPASASKXXP22,
author = {Pascal S. Brandt and
Jennifer A. Pacheco and
Prakash Adekkanattu and
Evan Sholle and
Sajjad Abedian and
Daniel J. Stone and
David Knaack and
Jie Xu and
Zhenxing Xu and
Yifan Peng and
Natalie C. Benda and
Fei Wang and
Yuan Luo and
Guoqian Jiang and
Jyotishman Pathak and
Luke V. Rasmussen},
title = {Design and validation of a FHIR-based EHR-driven phenotyping toolbox},
journal = {J. Am. Medical Informatics Assoc.},
volume = {29},
number = {9},
pages = {1449--1460},
year = {2022},
url = {https://doi.org/10.1093/jamia/ocac063},
doi = {10.1093/JAMIA/OCAC063},
timestamp = {Wed, 05 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/BrandtPASASKXXP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/YuPGLWSBCCDFGHH22,
author = {Jingzhi Yu and
Jennifer A. Pacheco and
Anika S. Ghosh and
Yuan Luo and
Chunhua Weng and
Ning Shang and
Barbara Benoit and
David S. Carrell and
Robert J. Carroll and
Ozan Dikilitas and
Robert R. Freimuth and
Vivian S. Gainer and
Hakon Hakonarson and
George Hripcsak and
Iftikhar J. Kullo and
Frank D. Mentch and
Shawn N. Murphy and
Peggy L. Peissig and
Andrea H. Ramirez and
Nephi Walton and
Wei{-}Qi Wei and
Luke V. Rasmussen},
title = {Under-specification as the source of ambiguity and vagueness in narrative
phenotype algorithm definitions},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {22},
number = {1},
pages = {23},
year = {2022},
url = {https://doi.org/10.1186/s12911-022-01759-z},
doi = {10.1186/S12911-022-01759-Z},
timestamp = {Mon, 14 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/YuPGLWSBCCDFGHH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2212-06042,
author = {Chengsheng Mao and
Jie Xu and
Luke V. Rasmussen and
Yikuan Li and
Prakash Adekkanattu and
Jennifer A. Pacheco and
Borna Bonakdarpour and
Robert Vassar and
Guoqian Jiang and
Fei Wang and
Jyotishman Pathak and
Yuan Luo},
title = {{AD-BERT:} Using Pre-trained contextualized embeddings to Predict
the Progression from Mild Cognitive Impairment to Alzheimer's Disease},
journal = {CoRR},
volume = {abs/2212.06042},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2212.06042},
doi = {10.48550/ARXIV.2212.06042},
eprinttype = {arXiv},
eprint = {2212.06042},
timestamp = {Tue, 03 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2212-06042.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aci/RasmussenCFFPPS21,
author = {Luke V. Rasmussen and
John J. Connolly and
Guilherme Del Fiol and
Robert R. Freimuth and
Douglas B. Pet and
Josh F. Peterson and
Brian H. Shirts and
Justin B. Starren and
Marc S. Williams and
Nephi Walton and
Casey Overby Taylor},
title = {Infobuttons for Genomic Medicine: Requirements and Barriers},
journal = {Appl. Clin. Inform.},
volume = {12},
number = {02},
pages = {383--390},
year = {2021},
url = {https://doi.org/10.1055/s-0041-1729164},
doi = {10.1055/S-0041-1729164},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/aci/RasmussenCFFPPS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/MuruganBTRFVYYG21,
author = {Mullai Murugan and
Lawrence J. Babb and
Casey Overby Taylor and
Luke V. Rasmussen and
Robert R. Freimuth and
Eric Venner and
Fei Yan and
Victoria Yi and
Stephen J. Granite and
Hana Zouk and
Samuel J. Aronson and
Kevin Power and
Alexander Fedotov and
David R. Crosslin and
David Fasel and
Gail P. Jarvik and
Hakon Hakonarson and
Hana Bangash and
Iftikhar J. Kullo and
John J. Connolly and
Jordan G. Nestor and
Pedro J. Caraballo and
Wei{-}Qi Wei and
Ken Wiley and
Heidi L. Rehm and
Richard A. Gibbs},
title = {Genomic considerations for FHIR{\textregistered}; eMERGE implementation
lessons},
journal = {J. Biomed. Informatics},
volume = {118},
pages = {103795},
year = {2021},
url = {https://doi.org/10.1016/j.jbi.2021.103795},
doi = {10.1016/J.JBI.2021.103795},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/MuruganBTRFVYYG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AdekkanattuPKSY21,
author = {Prakash Adekkanattu and
Jennifer A. Pacheco and
Joseph Kabariti and
Daniel J. Stone and
Yue Yu and
Parag Goyal and
Faraz S. Ahmad and
Guoqian Jiang and
Yuan Luo and
Luke V. Rasmussen and
Pascal S. Brandt and
Zhenxing Xu and
Jie Xu and
Fei Wang and
Natalie C. Benda and
Thomas R. Campion Jr. and
Jyotishman Pathak},
title = {Multi-site Evaluation of Longitudinal Changes in Ejection Fraction
in Heart Failure Patients Through Data-driven Phenotyping},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3576722-1.4626457/3576791-1.4626454},
timestamp = {Wed, 17 Apr 2024 11:46:53 +0200},
biburl = {https://dblp.org/rec/conf/amia/AdekkanattuPKSY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BendaBAPAJPR21,
author = {Natalie C. Benda and
Pascal S. Brandt and
Jessica S. Ancker and
Jennifer A. Pacheco and
Prakash Adekkanattu and
Guoqian Jiang and
Jyotishman Pathak and
Luke V. Rasmussen},
title = {Supporting EHR-based Cohort Discovery Through User-centered Design:
Results of an Early Formative Usability Study},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t005-1.4625076/t005-1.4625077/3577641-1.4625924/3576304-1.4625921},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/BendaBAPAJPR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LevinsonMRBRWW21,
author = {Rebecca T. Levinson and
Jennifer R. Malinowski and
Luke V. Rasmussen and
Suzette J. Bielinski and
V{\'{e}}ronique L. Roger and
Quinn Stanton Wells and
Laura K. Wiley},
title = {Impact of Sex and Gender Disparities on Computational Phenotyping:
{A} Potential Barrier to an Equitable Learning Health System},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3615233-1.4626229/3627189-1.4626226},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LevinsonMRBRWW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MaoXRPJWIPL21,
author = {Chengsheng Mao and
Jie Xu and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Guoqian Jiang and
Fei Wang and
Richard Isaacson and
Jyotishman Pathak and
Yuan Luo},
title = {A Deep Learning Framework Using a Pre-trained {BERT} Model to Predict
the Risk of Progression from Mild Cognitive Impairment to Alzheimer's
Disease},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577489-1.4626208/3577447-1.4626205},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MaoXRPJWIPL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/PachecoRWPCSMGG21,
author = {Jennifer A. Pacheco and
Luke V. Rasmussen and
Ken Wiley and
Thomas N. Person and
David J. Cronkite and
Sunghwan Sohn and
Shawn N. Murphy and
Justin H. Gundelach and
Vivian S. Gainer and
Victor M. Castro and
Cong Liu and
Todd Lingren and
Frank D. Mentch and
Agnes S. Sundaresan and
Garrett Eickelberg and
Valerie Willis and
Al'ona Furmanchuk and
Roshan Patel and
David S. Carrell and
Marc S. Williams and
Elizabeth W. Karlson and
Jodell E. Linder and
Yuan Luo and
Chunhua Weng and
Wei{-}Qi Wei},
title = {Evaluation of the Portability of Natural Language Processing-based
Computable Phenotypes in the eMERGE Network},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577692-1.4626178/3577271-1.4626175},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/PachecoRWPCSMGG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/StoneLLWZRABPWT21,
author = {Daniel J. Stone and
Sijia Liu and
Yuan Luo and
Andrew Wen and
Nansu Zong and
Luke V. Rasmussen and
Prakash Adekkanattu and
Pascal S. Brandt and
Jennifer A. Pacheco and
Fei Wang and
Cui Tao and
Jyotishman Pathak and
Hongfang Liu and
Guoqian Jiang},
title = {FHIRTime: Standardizing Temporal Patterns Identified from Clinical
Narratives Using {HL7} {FHIR}},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577460-1.4626100/3576929-1.4626097},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/StoneLLWZRABPWT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/WenRSLABPLWPLJ21,
author = {Andrew Wen and
Luke V. Rasmussen and
Daniel J. Stone and
Sijia Liu and
Prakash Adekkanattu and
Pascal S. Brandt and
Jennifer A. Pacheco and
Yuan Luo and
Fei Wang and
Jyotishman Pathak and
Hongfang Liu and
Guoqian Jiang},
title = {On Constraints and Considerations for Extending Support for Natural
Language Processing-Based {FHIR} Resource Generation},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577530-1.4626058/3577467-1.4626055},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/WenRSLABPLWPLJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/XuCZLIAAJKPRPW20,
author = {Zhenxing Xu and
Jingyuan Chou and
Xi Sheryl Zhang and
Yuan Luo and
Tamara Isakova and
Prakash Adekkanattu and
Jessica S. Ancker and
Guoqian Jiang and
Richard C. Kiefer and
Jennifer A. Pacheco and
Luke V. Rasmussen and
Jyotishman Pathak and
Fei Wang},
title = {Identifying sub-phenotypes of acute kidney injury using structured
and unstructured electronic health record data with memory networks},
journal = {J. Biomed. Informatics},
volume = {102},
pages = {103361},
year = {2020},
url = {https://doi.org/10.1016/j.jbi.2019.103361},
doi = {10.1016/J.JBI.2019.103361},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/XuCZLIAAJKPRPW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BrandtKPASAXXAW20,
author = {Pascal S. Brandt and
Richard C. Kiefer and
Jennifer A. Pacheco and
Prakash Adekkanattu and
Evan Sholle and
Faraz S. Ahmad and
Jie Xu and
Zhenxing Xu and
Jessica S. Ancker and
Fei Wang and
Yuan Luo and
Guoqian Jiang and
Jyotishman Pathak and
Luke V. Rasmussen},
title = {Feasibility of Cross-Platform EHR-Driven Phenotyping Using Clinical
Quality Language},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t004-1.4605866/t004-1.4605867/3414764-1.4606174/3410998-1.4606171},
timestamp = {Wed, 17 Apr 2024 11:47:01 +0200},
biburl = {https://dblp.org/rec/conf/amia/BrandtKPASAXXAW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/XuWXABJKLMPRZIP20,
author = {Jie Xu and
Fei Wang and
Zhenxing Xu and
Prakash Adekkanattu and
Pascal S. Brandt and
Guoqian Jiang and
Richard C. Kiefer and
Yuan Luo and
Chengsheng Mao and
Jennifer A. Pacheco and
Luke V. Rasmussen and
Yiye Zhang and
Richard Isaacson and
Jyotishman Pathak},
title = {Identification of Alzheimer's Disease Subtypes from Electronic Health
Records Using a Data-Driven Approach},
booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
Virtual Event, USA, November 14-18, 2020},
publisher = {{AMIA}},
year = {2020},
url = {https://knowledge.amia.org/72332-amia-1.4602255/t004-1.4605866/t004-1.4605867/3416582-1.4605883/3412798-1.4605880},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/XuWXABJKLMPRZIP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-00047,
author = {Timothy M. Herr and
Therese A. Nelson and
Luke V. Rasmussen and
Yinan Zheng and
Nicola Lancki and
Justin B. Starren},
title = {Design Principles Developed through User-Centered and Socio-Technical
Methods Improve Clinician Satisfaction, Speed, and Confidence in Pharmacogenomic
Clinical Decision Support},
journal = {CoRR},
volume = {abs/2002.00047},
year = {2020},
url = {https://arxiv.org/abs/2002.00047},
eprinttype = {arXiv},
eprint = {2002.00047},
timestamp = {Mon, 10 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-00047.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/HerrPRCPS19,
author = {Timothy M. Herr and
Josh F. Peterson and
Luke V. Rasmussen and
Pedro J. Caraballo and
Peggy L. Peissig and
Justin B. Starren},
title = {Pharmacogenomic clinical decision support design and multi-site process
outcomes analysis in the eMERGE Network},
journal = {J. Am. Medical Informatics Assoc.},
volume = {26},
number = {2},
pages = {143--148},
year = {2019},
url = {https://doi.org/10.1093/jamia/ocy156},
doi = {10.1093/JAMIA/OCY156},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/HerrPRCPS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RasmussenSAPRPC19,
author = {Luke V. Rasmussen and
Maureen E. Smith and
Federico Almaraz and
Stephen D. Persell and
Laura J. Rasmussen{-}Torvik and
Jennifer A. Pacheco and
Rex L. Chisholm and
Carl Christensen and
Timothy M. Herr and
Firas H. Wehbe and
Justin B. Starren},
title = {An ancillary genomics system to support the return of pharmacogenomic
results},
journal = {J. Am. Medical Informatics Assoc.},
volume = {26},
number = {4},
pages = {306--310},
year = {2019},
url = {https://doi.org/10.1093/jamia/ocy187},
doi = {10.1093/JAMIA/OCY187},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/RasmussenSAPRPC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/HripcsakSPRLBCC19,
author = {George Hripcsak and
Ning Shang and
Peggy L. Peissig and
Luke V. Rasmussen and
Cong Liu and
Barbara Benoit and
Robert J. Carroll and
David S. Carrell and
Joshua C. Denny and
Ozan Dikilitas and
Vivian S. Gainer and
Kayla Marie Howell and
Jeffrey G. Klann and
Iftikhar J. Kullo and
Todd Lingren and
Frank D. Mentch and
Shawn N. Murphy and
Karthik Natarajan and
Chunhua Weng},
title = {Facilitating phenotype transfer using a common data model},
journal = {J. Biomed. Informatics},
volume = {96},
year = {2019},
url = {https://doi.org/10.1016/j.jbi.2019.103253},
doi = {10.1016/J.JBI.2019.103253},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/HripcsakSPRLBCC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/HongWSTKRPAWLPL19,
author = {Na Hong and
Andrew Wen and
Daniel J. Stone and
Shintaro Tsuji and
Paul R. Kingsbury and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Prakash Adekkanattu and
Fei Wang and
Yuan Luo and
Jyotishman Pathak and
Hongfang Liu and
Guoqian Jiang},
title = {Developing a FHIR-based {EHR} phenotyping framework: {A} case study
for identification of patients with obesity and multiple comorbidities
from discharge summaries},
journal = {J. Biomed. Informatics},
volume = {99},
year = {2019},
url = {https://doi.org/10.1016/j.jbi.2019.103310},
doi = {10.1016/J.JBI.2019.103310},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/HongWSTKRPAWLPL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/ShangLRTCBLDMCW19,
author = {Ning Shang and
Cong Liu and
Luke V. Rasmussen and
Casey N. Ta and
Robert J. Carroll and
Barbara Benoit and
Todd Lingren and
Ozan Dikilitas and
Frank D. Mentch and
David S. Carrell and
Wei{-}Qi Wei and
Yuan Luo and
Vivian S. Gainer and
Iftikhar J. Kullo and
Jennifer A. Pacheco and
Hakon Hakonarson and
Theresa L. Walunas and
Joshua C. Denny and
Chunhua Weng},
title = {Making work visible for electronic phenotype implementation: Lessons
learned from the eMERGE network},
journal = {J. Biomed. Informatics},
volume = {99},
year = {2019},
url = {https://doi.org/10.1016/j.jbi.2019.103293},
doi = {10.1016/J.JBI.2019.103293},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/ShangLRTCBLDMCW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/SharmaMZVYZRJPL19,
author = {Himanshu Sharma and
Chengsheng Mao and
Yizhen Zhang and
Haleh Vatani and
Liang Yao and
Yizhen Zhong and
Luke V. Rasmussen and
Guoqian Jiang and
Jyotishman Pathak and
Yuan Luo},
title = {Developing a portable natural language processing based phenotyping
system},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {19-S},
number = {3},
pages = {79--87},
year = {2019},
url = {https://doi.org/10.1186/s12911-019-0786-z},
doi = {10.1186/S12911-019-0786-Z},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/midm/SharmaMZVYZRJPL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AdekkanattuJLKX19,
author = {Prakash Adekkanattu and
Guoqian Jiang and
Yuan Luo and
Paul R. Kingsbury and
Zhenxing Xu and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Richard C. Kiefer and
Daniel J. Stone and
Pascal S. Brandt and
Liang Yao and
Yizhen Zhong and
Yu Deng and
Fei Wang and
Jessica S. Ancker and
Thomas R. Campion Jr. and
Jyotishman Pathak},
title = {Evaluating the Portability of an {NLP} System for Processing Echocardiograms:
{A} Retrospective, Multi-site Observational Study},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3202784-1.4575177/3203565-1.4575174},
timestamp = {Wed, 17 Apr 2024 11:47:08 +0200},
biburl = {https://dblp.org/rec/conf/amia/AdekkanattuJLKX19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/DexterOEBWCRHOS19,
author = {Paul R. Dexter and
Henry H. Ong and
Amanda Elsey and
Gillian Bell and
Nephi Walton and
Wendy K. Chung and
Luke V. Rasmussen and
J. Kevin Hicks and
Aniwaa Owusu{-}obeng and
Stuart A. Scott and
Stephen B. Ellis and
Josh F. Peterson},
title = {Development of a Genomic Data Flow Framework: Results of a Survey
Administered to {NIH-NHGRI} {IGNITE} and eMERGE Consortia Participants},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3195283-1.4575123/3203249-1.4575120},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/DexterOEBWCRHOS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenBJKPAA19,
author = {Luke V. Rasmussen and
Pascal S. Brandt and
Guoqian Jiang and
Richard C. Kiefer and
Jennifer A. Pacheco and
Prakash Adekkanattu and
Jessica S. Ancker and
Fei Wang and
Zhenxing Xu and
Jyotishman Pathak and
Yuan Luo},
title = {Considerations for Improving the Portability of Electronic Health
Record-Based Phenotype Algorithms},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3191971-1.4574997/3202804-1.4574994},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenBJKPAA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/Xu0AAJKPRPW19,
author = {Zhenxing Xu and
Yuan Luo and
Prakash Adekkanattu and
Jessica S. Ancker and
Guoqian Jiang and
Richard C. Kiefer and
Jennifer A. Pacheco and
Luke V. Rasmussen and
Jyotishman Pathak and
Fei Wang},
editor = {Lucila Ohno{-}Machado and
Brigitte S{\'{e}}roussi},
title = {Stratified Mortality Prediction of Patients with Acute Kidney Injury
in Critical Care},
booktitle = {{MEDINFO} 2019: Health and Wellbeing e-Networks for All - Proceedings
of the 17th World Congress on Medical and Health Informatics, Lyon,
France, 25-30 August 2019},
series = {Studies in Health Technology and Informatics},
volume = {264},
pages = {462--466},
publisher = {{IOS} Press},
year = {2019},
url = {https://doi.org/10.3233/SHTI190264},
doi = {10.3233/SHTI190264},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/Xu0AAJKPRPW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1904-04990,
author = {Zhenxing Xu and
Jingyuan Chou and
Xi Sheryl Zhang and
Yuan Luo and
Tamara Isakova and
Prakash Adekkanattu and
Jessica S. Ancker and
Guoqian Jiang and
Richard C. Kiefer and
Jennifer A. Pacheco and
Luke V. Rasmussen and
Jyotishman Pathak and
Fei Wang},
title = {Identification of Predictive Sub-Phenotypes of Acute Kidney Injury
using Structured and Unstructured Electronic Health Record Data with
Memory Networks},
journal = {CoRR},
volume = {abs/1904.04990},
year = {2019},
url = {http://arxiv.org/abs/1904.04990},
eprinttype = {arXiv},
eprint = {1904.04990},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1904-04990.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-01961,
author = {Prakash Adekkanattu and
Guoqian Jiang and
Yuan Luo and
Paul R. Kingsbury and
Zhenxing Xu and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Richard C. Kiefer and
Daniel J. Stone and
Pascal S. Brandt and
Liang Yao and
Yizhen Zhong and
Yu Deng and
Fei Wang and
Jessica S. Ancker and
Thomas R. Campion Jr. and
Jyotishman Pathak},
title = {Evaluating the Portability of an {NLP} System for Processing Echocardiograms:
{A} Retrospective, Multi-site Observational Study},
journal = {CoRR},
volume = {abs/1905.01961},
year = {2019},
url = {http://arxiv.org/abs/1905.01961},
eprinttype = {arXiv},
eprint = {1905.01961},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1905-01961.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/AronsonBAGVCMWW18,
author = {Samuel J. Aronson and
Lawrence J. Babb and
Darren C. Ames and
Richard A. Gibbs and
Eric Venner and
John J. Connelly and
Keith Marsolo and
Chunhua Weng and
Marc S. Williams and
Andrea L. Hartzler and
Wayne H. Liang and
James D. Ralston and
Emily Beth Devine and
Shawn N. Murphy and
Christopher G. Chute and
Pedro J. Caraballo and
Iftikhar J. Kullo and
Robert R. Freimuth and
Luke V. Rasmussen and
Firas H. Wehbe and
Josh F. Peterson and
Jamie R. Robinson and
Ken Wiley and
Casey Overby Taylor and
eMERGE Network EHRI Working Group},
title = {Empowering genomic medicine by establishing critical sequencing result
data flows: the eMERGE example},
journal = {J. Am. Medical Informatics Assoc.},
volume = {25},
number = {10},
pages = {1375--1381},
year = {2018},
url = {https://doi.org/10.1093/jamia/ocy051},
doi = {10.1093/JAMIA/OCY051},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/AronsonBAGVCMWW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/PachecoRKCSCSMA18,
author = {Jennifer A. Pacheco and
Luke V. Rasmussen and
Richard C. Kiefer and
Thomas R. Campion Jr. and
Peter Speltz and
Robert J. Carroll and
Sarah C. Stallings and
Huan Mo and
Monika Ahuja and
Guoqian Jiang and
Eric R. LaRose and
Peggy L. Peissig and
Ning Shang and
Barbara Benoit and
Vivian S. Gainer and
Kenneth Borthwick and
Kathryn L. Jackson and
Ambrish Sharma and
Andy Yizhou Wu and
Abel N. Kho and
Dan M. Roden and
Jyotishman Pathak and
Joshua C. Denny and
William K. Thompson},
title = {A case study evaluating the portability of an executable computable
phenotype algorithm across multiple institutions and electronic health
record environments},
journal = {J. Am. Medical Informatics Assoc.},
volume = {25},
number = {11},
pages = {1540--1546},
year = {2018},
url = {https://doi.org/10.1093/jamia/ocy101},
doi = {10.1093/JAMIA/OCY101},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/PachecoRKCSCSMA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ZhongRDPSSWSDWH18,
author = {Yizhen Zhong and
Luke V. Rasmussen and
Yu Deng and
Jennifer A. Pacheco and
Maureen E. Smith and
Justin Starren and
Wei{-}Qi Wei and
Peter Speltz and
Joshua C. Denny and
Nephi Walton and
George Hripcsak and
Christopher G. Chute and
Yuan Luo},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Characterizing Design Patterns of EHR-Driven Phenotype Extraction
Algorithms},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {1143--1146},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621240},
doi = {10.1109/BIBM.2018.8621240},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/ZhongRDPSSWSDWH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/SharmaMZVYZRJPL18,
author = {Himanshu Sharma and
Chengsheng Mao and
Yizhen Zhang and
Haleh Vatani and
Liang Yao and
Yizhen Zhong and
Luke V. Rasmussen and
Guoqian Jiang and
Jyotishman Pathak and
Yuan Luo},
title = {Portable Phenotyping System: {A} Portable Machine-Learning Approach
to i2b2 Obesity Challenge},
booktitle = {{IEEE} International Conference on Healthcare Informatics Workshops,
{ICHI} Workshops 2018, New York, NY, USA, June 4-7, 2018},
pages = {86--87},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/ICHI-W.2018.00032},
doi = {10.1109/ICHI-W.2018.00032},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ichi/SharmaMZVYZRJPL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-06638,
author = {Himanshu Sharma and
Chengsheng Mao and
Yizhen Zhang and
Haleh Vatani and
Liang Yao and
Yizhen Zhong and
Luke V. Rasmussen and
Guoqian Jiang and
Jyotishman Pathak and
Yuan Luo},
title = {Developing a Portable Natural Language Processing Based Phenotyping
System},
journal = {CoRR},
volume = {abs/1807.06638},
year = {2018},
url = {http://arxiv.org/abs/1807.06638},
eprinttype = {arXiv},
eprint = {1807.06638},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1807-06638.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1811-06183,
author = {Yizhen Zhong and
Luke V. Rasmussen and
Yu Deng and
Jennifer A. Pacheco and
Maureen E. Smith and
Justin Starren and
Wei{-}Qi Wei and
Peter Speltz and
Joshua C. Denny and
Nephi Walton and
George Hripcsak and
Christopher G. Chute and
Yuan Luo},
title = {Characterizing Design Patterns of EHR-Driven Phenotype Extraction
Algorithms},
journal = {CoRR},
volume = {abs/1811.06183},
year = {2018},
url = {http://arxiv.org/abs/1811.06183},
eprinttype = {arXiv},
eprint = {1811.06183},
timestamp = {Tue, 11 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1811-06183.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/KenlyRSAJCWK17,
author = {Pauline Kenly and
Luke V. Rasmussen and
Andrew Schriever and
Faraz S. Ahmad and
Kathryn L. Jackson and
Richard Chagnon and
Theresa L. Walunas and
Abel N. Kho},
title = {Challenges impacting data collection from Electronic Health Record
{(EHR)} Systems in Small and Medium sized practices in the Midwest},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2725816-1.4257983/2731219-1.4257980},
timestamp = {Wed, 17 Apr 2024 11:47:24 +0200},
biburl = {https://dblp.org/rec/conf/amia/KenlyRSAJCWK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/KieferRPSDTPJ17,
author = {Richard C. Kiefer and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Peter Speltz and
Joshua C. Denny and
William K. Thompson and
Jyotishman Pathak and
Guoqian Jiang},
title = {Leveraging Value Sets from the Value Set Authority Center {(VSAC)}
in a Standards-Based Clinical Data Repository},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2731219-1.4257980/2730739-1.4257977},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/KieferRPSDTPJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenAABO17,
author = {Luke V. Rasmussen and
Darren C. Ames and
Samuel J. Aronson and
Lawrence J. Babb and
Casey L. Overby},
title = {Design and Implementation of a Structured Sequencing Report Format:
{A} Multi-Stakeholder Perspective from eMERGE},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t002-1.4258887/f002-1.4258888/2727422-1.4258931/2730939-1.4258928},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenAABO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenO17,
author = {Luke V. Rasmussen and
Casey L. Overby},
title = {DocUBuild: {A} Collaborative System to Enhance Dissemination and Discovery
of Genomic Clinical Content},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t006-1.4257302/f006-1.4257303/2732126-1.4257313/2730930-1.4257310},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenSKJPWK17,
author = {Luke V. Rasmussen and
Andrew Schriever and
Pauline Kenly and
Dejan Jovanov and
Stephen D. Persell and
Theresa L. Walunas and
Abel N. Kho},
title = {Use of the popHealth Open-Source Quality Measure Engine to Support
Cardiovascular Care at Small- and Medium-Sized Practices},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2729722-1.4257689/2730951-1.4257686},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenSKJPWK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SpeltzRKPTJPD17,
author = {Peter Speltz and
Luke V. Rasmussen and
Richard C. Kiefer and
Jennifer A. Pacheco and
William K. Thompson and
Guoqian Jiang and
Jyotishman Pathak and
Joshua C. Denny},
title = {The Phenotype Execution and Modeling Architecture: {A} Roadmap Towards
Next-generation Phenotyping Using EHRs},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2730456-1.4257578/2731521-1.4257575},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/SpeltzRKPTJPD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/WangLWRFC17,
author = {Amy Y. Wang and
William J. Lancaster and
Matthew C. Wyatt and
Luke V. Rasmussen and
Daniel Fort and
James J. Cimino},
title = {Classifying Clinical Trial Eligibility Criteria to Facilitate Phased
Cohort Identification Using Clinical Data Repositories},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t003-1.4258387/f003-1.4258388/2732051-1.4258449/2732233-1.4258446},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/WangLWRFC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aci/OverbyCCDFHHMPP16,
author = {Casey L. Overby and
John J. Connolly and
Christopher G. Chute and
Joshua C. Denny and
Robert R. Freimuth and
Andrea L. Hartzler and
Ingrid A. Holm and
Shannon F. Manzi and
Jyotishman Pathak and
Peggy L. Peissig and
Maureen E. Smith and
Marc S. Williams and
Brian H. Shirts and
Elena M. Stoffel and
Peter Tarczy{-}Hornoch and
Carolyn Rohrer Vitek and
Wendy A. Wolf and
Justin Starren and
Luke V. Rasmussen},
title = {Practical considerations for implementing genomic information resources},
journal = {Appl. Clin. Inform.},
volume = {07},
number = {03},
pages = {870--882},
year = {2016},
url = {https://doi.org/10.4338/aci-2016-04-ra-0060},
doi = {10.4338/ACI-2016-04-RA-0060},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/aci/OverbyCCDFHHMPP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/HrubyRHPCW16,
author = {Gregory William Hruby and
Luke V. Rasmussen and
David A. Hanauer and
Vimla L. Patel and
James J. Cimino and
Chunhua Weng},
title = {A multi-site cognitive task analysis for biomedical query mediation},
journal = {Int. J. Medical Informatics},
volume = {93},
pages = {74--84},
year = {2016},
url = {https://doi.org/10.1016/j.ijmedinf.2016.06.006},
doi = {10.1016/J.IJMEDINF.2016.06.006},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijmi/HrubyRHPCW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/KirbySRBGPPTPCE16,
author = {Jacqueline Kirby and
Peter Speltz and
Luke V. Rasmussen and
Melissa A. Basford and
Omri Gottesman and
Peggy L. Peissig and
Jennifer A. Pacheco and
Gerard Tromp and
Jyotishman Pathak and
David S. Carrell and
Stephen B. Ellis and
Todd Lingren and
William K. Thompson and
Guergana Savova and
Jonathan L. Haines and
Dan M. Roden and
Paul A. Harris and
Joshua C. Denny},
title = {PheKB: a catalog and workflow for creating electronic phenotype algorithms
for transportability},
journal = {J. Am. Medical Informatics Assoc.},
volume = {23},
number = {6},
pages = {1046--1052},
year = {2016},
url = {https://doi.org/10.1093/jamia/ocv202},
doi = {10.1093/JAMIA/OCV202},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/KirbySRBGPPTPCE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/HeatherlyRPPHDM16,
author = {Raymond Heatherly and
Luke V. Rasmussen and
Peggy L. Peissig and
Jennifer A. Pacheco and
Paul A. Harris and
Joshua C. Denny and
Bradley A. Malin},
title = {A multi-institution evaluation of clinical profile anonymization},
journal = {J. Am. Medical Informatics Assoc.},
volume = {23},
number = {e1},
pages = {e131--e137},
year = {2016},
url = {https://doi.org/10.1093/jamia/ocv154},
doi = {10.1093/JAMIA/OCV154},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/HeatherlyRPPHDM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/AzizKEWFHROSHW16,
author = {Ayesha Aziz and
Kensaku Kawamoto and
Karen Eilbeck and
Marc S. Williams and
Robert R. Freimuth and
Mark A. Hoffman and
Luke V. Rasmussen and
Casey Lynnette Overby and
Brian H. Shirts and
James M. Hoffman and
Brandon M. Welch},
title = {The genomic {CDS} sandbox: An assessment among domain experts},
journal = {J. Biomed. Informatics},
volume = {60},
pages = {84--94},
year = {2016},
url = {https://doi.org/10.1016/j.jbi.2015.12.019},
doi = {10.1016/J.JBI.2015.12.019},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/AzizKEWFHROSHW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/JiangKRSMPXMTDC16,
author = {Guoqian Jiang and
Richard C. Kiefer and
Luke V. Rasmussen and
Harold R. Solbrig and
Huan Mo and
Jennifer A. Pacheco and
Jie Xu and
Enid N. H. Montague and
William K. Thompson and
Joshua C. Denny and
Christopher G. Chute and
Jyotishman Pathak},
title = {Developing a data element repository to support EHR-driven phenotype
algorithm authoring and execution},
journal = {J. Biomed. Informatics},
volume = {62},
pages = {232--242},
year = {2016},
url = {https://doi.org/10.1016/j.jbi.2016.07.008},
doi = {10.1016/J.JBI.2016.07.008},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/JiangKRSMPXMTDC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HerrPRC16,
author = {Timothy M. Herr and
Josh F. Peterson and
Luke V. Rasmussen and
Pedro J. Caraballo},
title = {Implementing Pharmacogenomic Clinical Decision Support: Design and
Prescriber Response in the eMERGE Network},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t001-1.3365273/f001-1.3365274/2497492-1.3365550/2498698-1.3365547},
timestamp = {Wed, 17 Apr 2024 11:47:32 +0200},
biburl = {https://dblp.org/rec/conf/amia/HerrPRC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/JiangTRKPMSDP16,
author = {Guoqian Jiang and
William K. Thompson and
Luke V. Rasmussen and
Richard C. Kiefer and
Jennifer A. Pacheco and
Huan Mo and
Peter Speltz and
Joshua C. Denny and
Jyotishman Pathak},
title = {An {NLP} Extension to the Quality Data Model for EHR-Driven Phenotype
Algorithm Authoring and Execution},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2500219-1.3363898/2499803-1.3363893},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/JiangTRKPMSDP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenSAPRPC16,
author = {Luke V. Rasmussen and
Maureen E. Smith and
Federico Almaraz and
Stephen D. Persell and
Laura Rasmussen{-}Torvik and
Jennifer A. Pacheco and
Carl Christensen and
Timothy M. Herr and
Firas H. Wehbe and
Justin Starren},
title = {Design and Implementation of an Ancillary Genomics System for the
Return of Pharmacogenetic Results},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t001-1.3365273/f001-1.3365274/2499711-1.3365413/2499477-1.3365408},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenSAPRPC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZhongRSL16,
author = {Yizhen Zhong and
Luke V. Rasmussen and
Justin Starren and
Yuan Luo},
title = {Automatic identification and extraction of design patterns of EHR-driven
phenotyping algorithms},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t001-1.3365273/f001-1.3365274/2499263-1.3365285/2500381-1.3365280},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZhongRSL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/FortHFRS16,
author = {Daniel Fort and
Timothy M. Herr and
Paul Friedman and
Luke V. Rasmussen and
Justin Starren},
title = {Using Collaboration Networks to Visualize Patterns in Clinical Trial
Recruitment},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2016, San Francisco,
CA, USA, March 21-24, 2016},
publisher = {{AMIA}},
year = {2016},
url = {http://knowledge.amia.org/amia-59309-cri2016-1.3011827/t005-1.3012400/f005-1.3012401/a159-1.3012576/a161-1.3012571},
timestamp = {Wed, 20 Jun 2018 17:09:02 +0200},
biburl = {https://dblp.org/rec/conf/cri/FortHFRS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/MoJPKRPDT16,
author = {Huan Mo and
Guoqian Jiang and
Jennifer A. Pacheco and
Richard C. Kiefer and
Luke V. Rasmussen and
Jyotishman Pathak and
Joshua C. Denny and
William K. Thompson},
title = {A Decompositional Approach to Executing Quality Data Model Algorithms
on the i2b2 Platform},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2016, San Francisco,
CA, USA, March 21-24, 2016},
publisher = {{AMIA}},
year = {2016},
url = {http://knowledge.amia.org/amia-59309-cri2016-1.3011827/t003-1.3012832/f003-1.3012833/a032-1.3012895/a034-1.3012890},
timestamp = {Tue, 03 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cri/MoJPKRPDT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/SafaeiniliRCCJW16,
author = {Niloufar Safaeinili and
Luke V. Rasmussen and
Richard Chagnon and
Jody D. Ciolino and
Kathryn L. Jackson and
Theresa L. Walunas and
Abel N. Kho},
title = {Data Collection Methods to Support a Multi-State Practice Care Transformation
Network},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2016, San Francisco,
CA, USA, March 21-24, 2016},
publisher = {{AMIA}},
year = {2016},
url = {http://knowledge.amia.org/amia-59309-cri2016-1.3011827/t005-1.3012400/f005-1.3012401/a205-1.3012459/a206-1.3012454},
timestamp = {Thu, 25 Jan 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cri/SafaeiniliRCCJW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cri/StarrenBACBR16,
author = {Justin Starren and
Christopher Bethman and
Federico Almaraz and
Ryan Chmiel and
Michael Bass and
Luke V. Rasmussen},
title = {Seamless Integration of Patient Reported Outcomes Assessments into
the {EHR} Workflow},
booktitle = {Summit on Clinical Research Informatics, {CRI} 2016, San Francisco,
CA, USA, March 21-24, 2016},
publisher = {{AMIA}},
year = {2016},
url = {http://knowledge.amia.org/amia-59309-cri2016-1.3011827/t004-1.3012641/f004-1.3012642/a119-1.3012678/a121-1.3012673},
timestamp = {Thu, 25 Jan 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cri/StarrenBACBR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/MoTRPJKZXMCLMNW15,
author = {Huan Mo and
William K. Thompson and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Guoqian Jiang and
Richard C. Kiefer and
Qian Zhu and
Jie Xu and
Enid N. H. Montague and
David S. Carrell and
Todd Lingren and
Frank D. Mentch and
Yizhao Ni and
Firas H. Wehbe and
Peggy L. Peissig and
Gerard Tromp and
Eric B. Larson and
Christopher G. Chute and
Jyotishman Pathak and
Joshua C. Denny and
Peter Speltz and
Abel N. Kho and
Gail P. Jarvik and
Cosmin Adrian Bejan and
Marc S. Williams and
Kenneth Borthwick and
Terrie E. Kitchner and
Dan M. Roden and
Paul A. Harris},
title = {Desiderata for computable representations of electronic health records-driven
phenotype algorithms},
journal = {J. Am. Medical Informatics Assoc.},
volume = {22},
number = {6},
pages = {1220--1230},
year = {2015},
url = {https://doi.org/10.1093/jamia/ocv112},
doi = {10.1093/JAMIA/OCV112},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/MoTRPJKZXMCLMNW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/ShirtsSACGHJPST15,
author = {Brian H. Shirts and
Joseph S. Salama and
Samuel J. Aronson and
Wendy K. Chung and
Stacy W. Gray and
Lucia A. Hindorff and
Gail P. Jarvik and
Sharon E. Plon and
Elena M. Stoffel and
Peter Tarczy{-}Hornoch and
Eliezer M. Van Allen and
Karen E. Weck and
Christopher G. Chute and
Robert R. Freimuth and
Robert Grundmeier and
Andrea L. Hartzler and
Rongling Li and
Peggy L. Peissig and
Josh F. Peterson and
Luke V. Rasmussen and
Justin B. Starren and
Marc S. Williams and
Casey Lynnette Overby},
title = {{CSER} and eMERGE: current and potential state of the display of genetic
information in the electronic health record},
journal = {J. Am. Medical Informatics Assoc.},
volume = {22},
number = {6},
pages = {1231--1242},
year = {2015},
url = {https://doi.org/10.1093/jamia/ocv065},
doi = {10.1093/JAMIA/OCV065},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/ShirtsSACGHJPST15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/XuRSJKMPSZDPTM15,
author = {Jie Xu and
Luke V. Rasmussen and
Pamela L. Shaw and
Guoqian Jiang and
Richard C. Kiefer and
Huan Mo and
Jennifer A. Pacheco and
Peter Speltz and
Qian Zhu and
Joshua C. Denny and
Jyotishman Pathak and
William K. Thompson and
Enid N. H. Montague},
title = {Review and evaluation of electronic health records-driven phenotype
algorithm authoring tools for clinical and translational research},
journal = {J. Am. Medical Informatics Assoc.},
volume = {22},
number = {6},
pages = {1251--1260},
year = {2015},
url = {https://doi.org/10.1093/jamia/ocv070},
doi = {10.1093/JAMIA/OCV070},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/XuRSJKMPSZDPTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/JiangSKRMPMXSTD15,
author = {Guoqian Jiang and
Harold R. Solbrig and
Richard C. Kiefer and
Luke V. Rasmussen and
Huan Mo and
Jennifer A. Pacheco and
Enid N. H. Montague and
Jie Xu and
Peter Speltz and
William K. Thompson and
Joshua C. Denny and
Christopher G. Chute and
Jyotishman Pathak},
title = {Harmonization of Quality Data Model with {HL7} {FHIR} to Support EHR-driven
Phenotype Authoring and Execution: {A} Pilot Study},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t005-1.2744350/f005-1.2744351/2248041-1.2745100/2247582-1.2745097},
timestamp = {Wed, 17 Apr 2024 11:47:40 +0200},
biburl = {https://dblp.org/rec/conf/amia/JiangSKRMPMXSTD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MoPKRPDT15,
author = {Huan Mo and
Jennifer A. Pacheco and
Richard C. Kiefer and
Luke V. Rasmussen and
Jyotishman Pathak and
Joshua C. Denny and
William K. Thompson},
title = {Translating Electronic Clinical Quality Measures to Executable, Portable,
and Customizable Workflows in {KNIME}},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t001-1.2745946/f001-1.2745947/2248979-1.2746041/2249151-1.2746038},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MoPKRPDT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MontagueXRDJKPS15,
author = {Enid N. H. Montague and
Jie Xu and
Luke V. Rasmussen and
Joshua C. Denny and
Guoqian Jiang and
Richard C. Kiefer and
Jennifer A. Pacheco and
Peter Speltz and
William K. Thompson and
Jyotishman Pathak},
title = {Usability of a phenotype builder prototype and lessons learned for
the design of phenotyping tools},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t005-1.2744350/f005-1.2744351/2242896-1.2744834/2248127-1.2744830},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MontagueXRDJKPS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/PathakDTR15,
author = {Jyotishman Pathak and
Joshua C. Denny and
William K. Thompson and
Luke V. Rasmussen},
title = {PhEMA: Phenotype Modeling, Sharing and Execution Architecture},
booktitle = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2015},
publisher = {{AMIA}},
year = {2015},
url = {https://knowledge.amia.org/59310-amia-1.2741865/t008-1.2744186/f008-1.2744187/2249068-1.2744197/2248463-1.2744194},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/PathakDTR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/JiangSKRMSTDCP15,
author = {Guoqian Jiang and
Harold R. Solbrig and
Richard C. Kiefer and
Luke V. Rasmussen and
Huan Mo and
Peter Speltz and
William K. Thompson and
Joshua C. Denny and
Christopher G. Chute and
Jyotishman Pathak},
editor = {Indra Neil Sarkar and
Andrew Georgiou and
Paulo Mazzoncini de Azevedo Marques},
title = {A Standards-based Semantic Metadata Repository to Support EHR-driven
Phenotype Authoring and Execution},
booktitle = {{MEDINFO} 2015: eHealth-enabled Health - Proceedings of the 15th World
Congress on Health and Biomedical Informatics, S{\~{a}}o Paulo, Brazil,
19-23 August 2015},
series = {Studies in Health Technology and Informatics},
volume = {216},
pages = {1098},
publisher = {{IOS} Press},
year = {2015},
url = {https://doi.org/10.3233/978-1-61499-564-7-1098},
doi = {10.3233/978-1-61499-564-7-1098},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/JiangSKRMSTDCP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/RasmussenTPKCPPTDS14,
author = {Luke V. Rasmussen and
William K. Thompson and
Jennifer A. Pacheco and
Abel N. Kho and
David Carrell and
Jyotishman Pathak and
Peggy L. Peissig and
Gerard Tromp and
Joshua C. Denny and
Justin B. Starren},
title = {Design patterns for the development of electronic health record-driven
phenotype extraction algorithms},
journal = {J. Biomed. Informatics},
volume = {51},
pages = {280--286},
year = {2014},
url = {https://doi.org/10.1016/j.jbi.2014.06.007},
doi = {10.1016/J.JBI.2014.06.007},
timestamp = {Tue, 16 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbi/RasmussenTPKCPPTDS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HanauerHFRMW14,
author = {David A. Hanauer and
Gregory William Hruby and
Daniel Fort and
Luke V. Rasmussen and
Eneida A. Mendon{\c{c}}a and
Chunhua Weng},
title = {What Is Asked in Clinical Data Request Forms? {A} Multi-site Thematic
Analysis of Forms Towards Better Data Access Support},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-004-1.1544972/f-004-1.1544973/a-158-1.1545199/a-159-1.1545196},
timestamp = {Wed, 17 Apr 2024 11:47:48 +0200},
biburl = {https://dblp.org/rec/conf/amia/HanauerHFRMW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OverbyRHCPHFSDL14,
author = {Casey L. Overby and
Luke V. Rasmussen and
Andrea L. Hartzler and
John J. Connolly and
Josh F. Peterson and
RoseMary Hedberg and
Robert R. Freimuth and
Brian H. Shirts and
Joshua C. Denny and
Eric B. Larson and
Christopher G. Chute and
Gail P. Jarvik and
James D. Ralston and
Alan R. Shuldiner and
Iftikhar J. Kullo and
Peter Tarczy{-}Hornoch and
Marc S. Williams},
title = {A Template for Authoring and Adapting Genomic Medicine Content in
the eMERGE Infobutton Project},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-004-1.1544972/f-004-1.1544973/a-193-1.1545094/a-194-1.1545091},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/OverbyRHCPHFSDL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenXLZPPT14,
author = {Luke V. Rasmussen and
Jie Xu and
Ruijue Liu and
Qian Zhu and
Jennifer A. Pacheco and
Jyotishman Pathak and
William K. Thompson and
Joshua C. Denny and
Huan Mo and
Richard C. Kiefer and
Peter Speltz and
Enid N. H. Montague},
title = {Evaluation of Existing Phenotype Authoring Tools for Clinical Research},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-485-1.1544216/a-486-1.1544213},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenXLZPPT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SchneiderSR14,
author = {Daniel H. Schneider and
Nathan D. Sisterson and
Luke V. Rasmussen},
title = {Reproducibility of Health Care Datasets},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-505-1.1544156/a-506-1.1544153},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/SchneiderSR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ZhuMRPPXKSMTDP14,
author = {Qian Zhu and
Huan Mo and
Luke V. Rasmussen and
Andrew R. Post and
Jennifer A. Pacheco and
Jie Xu and
Richard C. Kiefer and
Peter Speltz and
Enid N. H. Montague and
William K. Thompson and
Joshua C. Denny and
Jyotishman Pathak},
title = {Qualitative evaluation of three phenotype information models to find
methotrexate liver injury},
booktitle = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 15-19, 2014},
publisher = {{AMIA}},
year = {2014},
url = {https://knowledge.amia.org/56638-amia-1.1540970/t-001-1.1545410/f-001-1.1545411/a-088-1.1545415/a-089-1.1545412},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ZhuMRPPXKSMTDP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/PeissigRBLMWCDWPCKS12,
author = {Peggy L. Peissig and
Luke V. Rasmussen and
Richard L. Berg and
James G. Linneman and
Catherine A. McCarty and
Carol Waudby and
Lin Chen and
Joshua C. Denny and
Russell A. Wilke and
Jyotishman Pathak and
David Carrell and
Abel N. Kho and
Justin B. Starren},
title = {Importance of multi-modal approaches to effectively identify cataract
cases from electronic health records},
journal = {J. Am. Medical Informatics Assoc.},
volume = {19},
number = {2},
pages = {225--234},
year = {2012},
url = {https://doi.org/10.1136/amiajnl-2011-000456},
doi = {10.1136/AMIAJNL-2011-000456},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/PeissigRBLMWCDWPCKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RasmussenPMS12,
author = {Luke V. Rasmussen and
Peggy L. Peissig and
Catherine A. McCarty and
Justin Starren},
title = {Development of an optical character recognition pipeline for handwritten
form fields from an electronic health record},
journal = {J. Am. Medical Informatics Assoc.},
volume = {19},
number = {e1},
year = {2012},
url = {https://doi.org/10.1136/amiajnl-2011-000182},
doi = {10.1136/AMIAJNL-2011-000182},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/RasmussenPMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenABMM12,
author = {Luke V. Rasmussen and
Brian D. Athey and
Andrew D. Boyd and
Bradley A. Malin and
Shawn N. Murphy},
title = {Rethinking the "Honest Broker" in the Changing Face of Security
and Privacy},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-003-1.640625/f-001-1.640626/a-193-1.640645/a-194-1.640642},
timestamp = {Wed, 17 Apr 2024 11:48:03 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenABMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RasmussenWLLCKS12,
author = {Luke V. Rasmussen and
David Were and
Jeff Lunt and
Steve Lee and
Carl Christensen and
Warren A. Kibbe and
Justin Starren},
title = {Integrating Research Recruitment into a Clinical Patient Portal},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-007-1.639272/f-001-1.639273/a-522-1.639630/a-523-1.639626},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/RasmussenWLLCKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SharmaMRWS12,
author = {Garima Sharma and
Emre Motan and
Luke V. Rasmussen and
Andrew Winter and
Justin Starren},
title = {Grouping and Translating Value Sets},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-007-1.639272/f-001-1.639273/a-550-1.639543/a-551-1.639540},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/SharmaMRWS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ThompsonRPPDKMP12,
author = {William K. Thompson and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Peggy L. Peissig and
Joshua C. Denny and
Abel N. Kho and
Aaron W. Miller and
Jyotishman Pathak},
title = {An Evaluation of the {NQF} Quality Data Model for Representing Electronic
Health Record Driven Phenotyping Algorithms},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-003-1.640625/f-001-1.640626/a-104-1.640918/a-105-1.640915},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ThompsonRPPDKMP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ThompsonRPRMK12,
author = {William K. Thompson and
Luke V. Rasmussen and
Jennifer A. Pacheco and
Anna Roberts and
Arun Muthalagu and
Abel N. Kho},
title = {Open Source Workflow Tools for Electronic Health Record Based Phenotyping
Algorithms},
booktitle = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
Chicago, Illinois, USA, November 3-7, 2012},
publisher = {{AMIA}},
year = {2012},
url = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-007-1.639272/f-001-1.639273/a-583-1.639444/a-584-1.639439},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ThompsonRPRMK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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