BibTeX records: Dzung L. Pham

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@inproceedings{DBLP:conf/isbi/ZhangZDRPCP24,
  author       = {Jinwei Zhang and
                  Lianrui Zuo and
                  Blake E. Dewey and
                  Samuel W. Remedios and
                  Dzung L. Pham and
                  Aaron Carass and
                  Jerry L. Prince},
  title        = {Towards an Accurate and Generalizable Multiple Sclerosis Lesion Segmentation
                  Model Using Self-Ensembled Lesion Fusion},
  booktitle    = {{IEEE} International Symposium on Biomedical Imaging, {ISBI} 2024,
                  Athens, Greece, May 27-30, 2024},
  pages        = {1--5},
  publisher    = {{IEEE}},
  year         = {2024},
  url          = {https://doi.org/10.1109/ISBI56570.2024.10635877},
  doi          = {10.1109/ISBI56570.2024.10635877},
  timestamp    = {Fri, 06 Sep 2024 21:02:06 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/ZhangZDRPCP24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2401-17571,
  author       = {Zhangxing Bian and
                  Ahmed Alshareef and
                  Shuwen Wei and
                  Junyu Chen and
                  Yuli Wang and
                  Jonghye Woo and
                  Dzung L. Pham and
                  Jiachen Zhuo and
                  Aaron Carass and
                  Jerry L. Prince},
  title        = {Is Registering Raw Tagged-MR Enough for Strain Estimation in the Era
                  of Deep Learning?},
  journal      = {CoRR},
  volume       = {abs/2401.17571},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2401.17571},
  doi          = {10.48550/ARXIV.2401.17571},
  eprinttype    = {arXiv},
  eprint       = {2401.17571},
  timestamp    = {Thu, 08 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2401-17571.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RemediosHZCPPD23,
  author       = {Samuel W. Remedios and
                  Shuo Han and
                  Lianrui Zuo and
                  Aaron Carass and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Blake E. Dewey},
  editor       = {Jelmer M. Wolterink and
                  David Svoboda and
                  Can Zhao and
                  Virginia Fernandez},
  title        = {Self-Supervised Super-Resolution for Anisotropic {MR} Images with
                  and Without Slice Gap},
  booktitle    = {Simulation and Synthesis in Medical Imaging - 8th International Workshop,
                  {SASHIMI} 2023, Held in Conjunction with {MICCAI} 2023, Vancouver,
                  BC, Canada, October 8, 2023, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {14288},
  pages        = {118--128},
  publisher    = {Springer},
  year         = {2023},
  url          = {https://doi.org/10.1007/978-3-031-44689-4\_12},
  doi          = {10.1007/978-3-031-44689-4\_12},
  timestamp    = {Wed, 18 Oct 2023 16:49:03 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RemediosHZCPPD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RemediosDCPP23,
  author       = {Samuel W. Remedios and
                  Blake E. Dewey and
                  Aaron Carass and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Olivier Colliot and
                  Ivana Isgum},
  title        = {A deep generative prior for high-resolution isotropic {MR} head slices},
  booktitle    = {Medical Imaging 2023: Image Processing, San Diego, CA, USA, February
                  19-23, 2023},
  series       = {{SPIE} Proceedings},
  volume       = {12464},
  publisher    = {{SPIE}},
  year         = {2023},
  url          = {https://doi.org/10.1117/12.2654032},
  doi          = {10.1117/12.2654032},
  timestamp    = {Mon, 18 Mar 2024 16:27:18 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/RemediosDCPP23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2312-01460,
  author       = {Jinwei Zhang and
                  Lianrui Zuo and
                  Blake E. Dewey and
                  Samuel W. Remedios and
                  Dzung L. Pham and
                  Aaron Carass and
                  Jerry L. Prince},
  title        = {Towards an accurate and generalizable multiple sclerosis lesion segmentation
                  model using self-ensembled lesion fusion},
  journal      = {CoRR},
  volume       = {abs/2312.01460},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2312.01460},
  doi          = {10.48550/ARXIV.2312.01460},
  eprinttype    = {arXiv},
  eprint       = {2312.01460},
  timestamp    = {Tue, 02 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2312-01460.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/AlshareefJCKDMD22,
  author       = {Ahmed Alshareef and
                  Curtis L. Johnson and
                  Aaron Carass and
                  Andrew K. Knutsen and
                  Peyton L. Delgorio and
                  Grace McIlvain and
                  Alexa M. Diano and
                  K. T. Ramesh and
                  Philip V. Bayly and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Barjor S. Gimi and
                  Andrzej Kr{\'{o}}l},
  title        = {Relationship between cerebral vasculature and brain stiffness measured
                  using {MR} elastography},
  booktitle    = {Medical Imaging 2022: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, San Diego, CA, USA, February 20-24, 2022 /
                  Online, March 21-27, 2022},
  series       = {{SPIE} Proceedings},
  volume       = {12036},
  publisher    = {{SPIE}},
  year         = {2022},
  url          = {https://doi.org/10.1117/12.2612987},
  doi          = {10.1117/12.2612987},
  timestamp    = {Thu, 18 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mibam/AlshareefJCKDMD22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/TohidiRGS0DRCPP22,
  author       = {Pouria Tohidi and
                  Samuel W. Remedios and
                  Danielle L. Greenman and
                  Muhan Shao and
                  Shuo Han and
                  Blake E. Dewey and
                  Jacob C. Reinhold and
                  Yi{-}Yu Chou and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Aaron Carass},
  editor       = {Barjor S. Gimi and
                  Andrzej Kr{\'{o}}l},
  title        = {Multiple Sclerosis brain lesion segmentation with different architecture
                  ensembles},
  booktitle    = {Medical Imaging 2022: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, San Diego, CA, USA, February 20-24, 2022 /
                  Online, March 21-27, 2022},
  series       = {{SPIE} Proceedings},
  volume       = {12036},
  publisher    = {{SPIE}},
  year         = {2022},
  url          = {https://doi.org/10.1117/12.2623302},
  doi          = {10.1117/12.2623302},
  timestamp    = {Thu, 21 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/mibam/TohidiRGS0DRCPP22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XueDZHCDRPSCP22,
  author       = {Yuan Xue and
                  Blake E. Dewey and
                  Lianrui Zuo and
                  Shuo Han and
                  Aaron Carass and
                  Peiyu Duan and
                  Samuel W. Remedios and
                  Dzung L. Pham and
                  Shiv Saidha and
                  Peter A. Calabresi and
                  Jerry L. Prince},
  editor       = {Can Zhao and
                  David Svoboda and
                  Jelmer M. Wolterink and
                  Mar{\'{\i}}a Escobar},
  title        = {Bi-directional Synthesis of Pre- and Post-contrast {MRI} via Guided
                  Feature Disentanglement},
  booktitle    = {Simulation and Synthesis in Medical Imaging - 7th International Workshop,
                  {SASHIMI} 2022, Held in Conjunction with {MICCAI} 2022, Singapore,
                  September 18, 2022, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {13570},
  pages        = {55--65},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-16980-9\_6},
  doi          = {10.1007/978-3-031-16980-9\_6},
  timestamp    = {Sun, 04 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/XueDZHCDRPSCP22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RemediosHXCTPP22,
  author       = {Samuel W. Remedios and
                  Shuo Han and
                  Yuan Xue and
                  Aaron Carass and
                  Trac D. Tran and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Linwei Wang and
                  Qi Dou and
                  P. Thomas Fletcher and
                  Stefanie Speidel and
                  Shuo Li},
  title        = {Deep Filter Bank Regression for Super-Resolution of Anisotropic {MR}
                  Brain Images},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2022 - 25th International Conference, Singapore, September 18-22,
                  2022, Proceedings, Part {VI}},
  series       = {Lecture Notes in Computer Science},
  volume       = {13436},
  pages        = {613--622},
  publisher    = {Springer},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-3-031-16446-0\_58},
  doi          = {10.1007/978-3-031-16446-0\_58},
  timestamp    = {Mon, 16 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/RemediosHXCTPP22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/ChouRBP22,
  author       = {Yi{-}Yu Chou and
                  Samuel W. Remedios and
                  John A. Butman and
                  Dzung L. Pham},
  editor       = {Olivier Colliot and
                  Ivana Isgum and
                  Bennett A. Landman and
                  Murray H. Loew},
  title        = {Automatic classification of {MRI} contrasts using a deep Siamese network
                  and one-shot learning},
  booktitle    = {Medical Imaging 2022: Image Processing, San Diego, CA, USA, February
                  20-24, 2022 / Online, March 21-27, 2022},
  series       = {{SPIE} Proceedings},
  volume       = {12032},
  publisher    = {{SPIE}},
  year         = {2022},
  url          = {https://doi.org/10.1117/12.2613052},
  doi          = {10.1117/12.2613052},
  timestamp    = {Thu, 14 Mar 2024 14:38:36 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/ChouRBP22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-02611,
  author       = {Samuel W. Remedios and
                  Shuo Han and
                  Yuan Xue and
                  Aaron Carass and
                  Trac D. Tran and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Deep filter bank regression for super-resolution of anisotropic {MR}
                  brain images},
  journal      = {CoRR},
  volume       = {abs/2209.02611},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2209.02611},
  doi          = {10.48550/ARXIV.2209.02611},
  eprinttype    = {arXiv},
  eprint       = {2209.02611},
  timestamp    = {Mon, 16 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2209-02611.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/ZhaoDPCRP21,
  author       = {Can Zhao and
                  Blake E. Dewey and
                  Dzung L. Pham and
                  Peter A. Calabresi and
                  Daniel S. Reich and
                  Jerry L. Prince},
  title        = {{SMORE:} {A} Self-Supervised Anti-Aliasing and Super-Resolution Algorithm
                  for {MRI} Using Deep Learning},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {40},
  number       = {3},
  pages        = {805--817},
  year         = {2021},
  url          = {https://doi.org/10.1109/TMI.2020.3037187},
  doi          = {10.1109/TMI.2020.3037187},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/ZhaoDPCRP21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RemediosHDPPC21,
  author       = {Samuel W. Remedios and
                  Shuo Han and
                  Blake E. Dewey and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Aaron Carass},
  editor       = {David Svoboda and
                  Ninon Burgos and
                  Jelmer M. Wolterink and
                  Can Zhao},
  title        = {Joint Image and Label Self-super-Resolution},
  booktitle    = {Simulation and Synthesis in Medical Imaging - 6th International Workshop,
                  {SASHIMI} 2021, Held in Conjunction with {MICCAI} 2021, Strasbourg,
                  France, September 27, 2021, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12965},
  pages        = {14--23},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-87592-3\_2},
  doi          = {10.1007/978-3-030-87592-3\_2},
  timestamp    = {Mon, 16 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/RemediosHDPPC21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2103-02767,
  author       = {Dzung L. Pham and
                  Yi{-}Yu Chou and
                  Blake E. Dewey and
                  Daniel S. Reich and
                  John A. Butman and
                  Snehashis Roy},
  title        = {Contrast Adaptive Tissue Classification by Alternating Segmentation
                  and Synthesis},
  journal      = {CoRR},
  volume       = {abs/2103.02767},
  year         = {2021},
  url          = {https://arxiv.org/abs/2103.02767},
  eprinttype    = {arXiv},
  eprint       = {2103.02767},
  timestamp    = {Tue, 16 Mar 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2103-02767.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PhamCDRBR20,
  author       = {Dzung L. Pham and
                  Yi{-}Yu Chou and
                  Blake E. Dewey and
                  Daniel S. Reich and
                  John A. Butman and
                  Snehashis Roy},
  editor       = {Ninon Burgos and
                  David Svoboda and
                  Jelmer M. Wolterink and
                  Can Zhao},
  title        = {Contrast Adaptive Tissue Classification by Alternating Segmentation
                  and Synthesis},
  booktitle    = {Simulation and Synthesis in Medical Imaging - 5th International Workshop,
                  {SASHIMI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru,
                  October 4, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12417},
  pages        = {1--10},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-59520-3\_1},
  doi          = {10.1007/978-3-030-59520-3\_1},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/PhamCDRBR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RemediosBLP20,
  author       = {Samuel W. Remedios and
                  John A. Butman and
                  Bennett A. Landman and
                  Dzung L. Pham},
  editor       = {Shadi Albarqouni and
                  Spyridon Bakas and
                  Konstantinos Kamnitsas and
                  M. Jorge Cardoso and
                  Bennett A. Landman and
                  Wenqi Li and
                  Fausto Milletari and
                  Nicola Rieke and
                  Holger Roth and
                  Daguang Xu and
                  Ziyue Xu},
  title        = {Federated Gradient Averaging for Multi-Site Training with Momentum-Based
                  Optimizers},
  booktitle    = {Domain Adaptation and Representation Transfer, and Distributed and
                  Collaborative Learning - Second {MICCAI} Workshop, {DART} 2020, and
                  First {MICCAI} Workshop, {DCL} 2020, Held in Conjunction with {MICCAI}
                  2020, Lima, Peru, October 4-8, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12444},
  pages        = {170--180},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-60548-3\_17},
  doi          = {10.1007/978-3-030-60548-3\_17},
  timestamp    = {Tue, 19 Jul 2022 10:23:16 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RemediosBLP20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RezaBPPR20,
  author       = {Syed M. S. Reza and
                  John A. Butman and
                  Deric M. Park and
                  Dzung L. Pham and
                  Snehashis Roy},
  editor       = {Mingxia Liu and
                  Pingkun Yan and
                  Chunfeng Lian and
                  Xiaohuan Cao},
  title        = {AdaBoosted Deep Ensembles: Getting Maximum Performance Out of Small
                  Training Datasets},
  booktitle    = {Machine Learning in Medical Imaging - 11th International Workshop,
                  {MLMI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru, October
                  4, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12436},
  pages        = {572--582},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-59861-7\_58},
  doi          = {10.1007/978-3-030-59861-7\_58},
  timestamp    = {Tue, 18 Jan 2022 13:58:27 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/RezaBPPR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RemediosWBKRPBL20,
  author       = {Samuel Remedios and
                  Zihao Wu and
                  Camilo Bermudez and
                  Cailey I. Kerley and
                  Snehashis Roy and
                  Mayur B. Patel and
                  John A. Butman and
                  Bennett A. Landman and
                  Dzung L. Pham},
  editor       = {Ivana Isgum and
                  Bennett A. Landman},
  title        = {Extracting 2D weak labels from volume labels using multiple instance
                  learning in {CT} hemorrhage detection},
  booktitle    = {Medical Imaging 2020: Image Processing, Houston, TX, USA, February
                  15-20, 2020},
  series       = {{SPIE} Proceedings},
  volume       = {11313},
  pages        = {113130F},
  publisher    = {{SPIE}},
  year         = {2020},
  url          = {https://doi.org/10.1117/12.2549356},
  doi          = {10.1117/12.2549356},
  timestamp    = {Thu, 30 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/RemediosWBKRPBL20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tbe/GomezKXLCPBP19,
  author       = {Arnold D. Gomez and
                  Andrew K. Knutsen and
                  Fangxu Xing and
                  Yuan{-}Chiao Lu and
                  Deva Chan and
                  Dzung L. Pham and
                  Philip V. Bayly and
                  Jerry L. Prince},
  title        = {3-D Measurements of Acceleration-Induced Brain Deformation via Harmonic
                  Phase Analysis and Finite-Element Models},
  journal      = {{IEEE} Trans. Biomed. Eng.},
  volume       = {66},
  number       = {5},
  pages        = {1456--1467},
  year         = {2019},
  url          = {https://doi.org/10.1109/TBME.2018.2874591},
  doi          = {10.1109/TBME.2018.2874591},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tbe/GomezKXLCPBP19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/RezaRPPB19,
  author       = {Syed M. S. Reza and
                  Snehashis Roy and
                  Deric M. Park and
                  Dzung L. Pham and
                  John A. Butman},
  editor       = {Barjor Gimi and
                  Andrzej Kr{\'{o}}l},
  title        = {Cascaded convolutional neural networks for spine chordoma tumor segmentation
                  from {MRI}},
  booktitle    = {Medical Imaging 2019: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, San Diego, California, United States, 16-21
                  February 2019},
  series       = {{SPIE} Proceedings},
  volume       = {10953},
  pages        = {1095325},
  publisher    = {{SPIE}},
  year         = {2019},
  url          = {https://doi.org/10.1117/12.2514000},
  doi          = {10.1117/12.2514000},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mibam/RezaRPPB19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RemediosRBBNPBL19,
  author       = {Samuel Remedios and
                  Snehashis Roy and
                  Justin A. Blaber and
                  Camilo Bermudez and
                  Vishwesh Nath and
                  Mayur B. Patel and
                  John A. Butman and
                  Bennett A. Landman and
                  Dzung L. Pham},
  editor       = {Elsa D. Angelini and
                  Bennett A. Landman},
  title        = {Distributed deep learning for robust multi-site segmentation of {CT}
                  imaging after traumatic brain injury},
  booktitle    = {Medical Imaging 2019: Image Processing, San Diego, California, United
                  States, 16-21 February 2019},
  series       = {{SPIE} Proceedings},
  volume       = {10949},
  pages        = {109490A},
  publisher    = {{SPIE}},
  year         = {2019},
  url          = {https://doi.org/10.1117/12.2511997},
  doi          = {10.1117/12.2511997},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/RemediosRBBNPBL19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-04207,
  author       = {Samuel Remedios and
                  Snehashis Roy and
                  Justin A. Blaber and
                  Camilo Bermudez and
                  Vishwesh Nath and
                  Mayur B. Patel and
                  John A. Butman and
                  Bennett A. Landman and
                  Dzung L. Pham},
  title        = {Distributed deep learning for robust multi-site segmentation of {CT}
                  imaging after traumatic brain injury},
  journal      = {CoRR},
  volume       = {abs/1903.04207},
  year         = {2019},
  url          = {http://arxiv.org/abs/1903.04207},
  eprinttype    = {arXiv},
  eprint       = {1903.04207},
  timestamp    = {Sun, 31 Mar 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1903-04207.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-05650,
  author       = {Samuel W. Remedios and
                  Zihao Wu and
                  Camilo Bermudez and
                  Cailey I. Kerley and
                  Snehashis Roy and
                  Mayur B. Patel and
                  John A. Butman and
                  Bennett A. Landman and
                  Dzung L. Pham},
  title        = {Extracting 2D weak labels from volume labels using multiple instance
                  learning in {CT} hemorrhage detection},
  journal      = {CoRR},
  volume       = {abs/1911.05650},
  year         = {2019},
  url          = {http://arxiv.org/abs/1911.05650},
  eprinttype    = {arXiv},
  eprint       = {1911.05650},
  timestamp    = {Thu, 30 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1911-05650.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/RoyBCP18,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Leighton Chan and
                  Dzung L. Pham},
  title        = {{TBI} contusion segmentation from {MRI} using convolutional neural
                  networks},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {158--162},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363545},
  doi          = {10.1109/ISBI.2018.8363545},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/RoyBCP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/RoyKKBDBP18,
  author       = {Snehashis Roy and
                  Andrew K. Knutsen and
                  Alexandru Korotcov and
                  Asamoah Bosomtwi and
                  Bernard Dardzinski and
                  John A. Butman and
                  Dzung L. Pham},
  title        = {A deep learning framework for brain extraction in humans and animals
                  with traumatic brain injury},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {687--691},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363667},
  doi          = {10.1109/ISBI.2018.8363667},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/RoyKKBDBP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ChouRCBP18,
  author       = {Yi{-}Yu Chou and
                  Snehashis Roy and
                  Catie Chang and
                  John A. Butman and
                  Dzung L. Pham},
  title        = {Deep learning of resting state networks from independent component
                  analysis},
  booktitle    = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
                  2018, Washington, DC, USA, April 4-7, 2018},
  pages        = {747--751},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/ISBI.2018.8363681},
  doi          = {10.1109/ISBI.2018.8363681},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/ChouRCBP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/PhamR18,
  author       = {Dzung L. Pham and
                  Snehashis Roy},
  editor       = {Barjor Gimi and
                  Andrzej Kr{\'{o}}l},
  title        = {Alternating segmentation and simulation for contrast adaptive tissue
                  classification},
  booktitle    = {Medical Imaging 2018: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, Houston, Texas, United States, 10-15 February
                  2018},
  series       = {{SPIE} Proceedings},
  volume       = {10578},
  pages        = {1057804},
  publisher    = {{SPIE}},
  year         = {2018},
  url          = {https://doi.org/10.1117/12.2295047},
  doi          = {10.1117/12.2295047},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mibam/PhamR18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/micad/RemediosPBR18,
  author       = {Samuel Remedios and
                  Dzung L. Pham and
                  John A. Butman and
                  Snehashis Roy},
  editor       = {Nicholas A. Petrick and
                  Kensaku Mori},
  title        = {Classifying magnetic resonance image modalities with convolutional
                  neural networks},
  booktitle    = {Medical Imaging 2018: Computer-Aided Diagnosis, Houston, Texas, USA,
                  10-15 February 2018},
  series       = {{SPIE} Proceedings},
  volume       = {10575},
  pages        = {105752I},
  publisher    = {{SPIE}},
  year         = {2018},
  url          = {https://doi.org/10.1117/12.2293943},
  doi          = {10.1117/12.2293943},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/micad/RemediosPBR18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/ZhaoCDWOCRSPP18,
  author       = {Can Zhao and
                  Aaron Carass and
                  Blake E. Dewey and
                  Jonghye Woo and
                  Jiwon Oh and
                  Peter A. Calabresi and
                  Daniel S. Reich and
                  Pascal Sati and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Alejandro F. Frangi and
                  Julia A. Schnabel and
                  Christos Davatzikos and
                  Carlos Alberola{-}L{\'{o}}pez and
                  Gabor Fichtinger},
  title        = {A Deep Learning Based Anti-aliasing Self Super-Resolution Algorithm
                  for {MRI}},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2018 - 21st International Conference, Granada, Spain, September 16-20,
                  2018, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11070},
  pages        = {100--108},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-00928-1\_12},
  doi          = {10.1007/978-3-030-00928-1\_12},
  timestamp    = {Sun, 04 Aug 2024 19:38:45 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/ZhaoCDWOCRSPP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1803-09172,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Daniel S. Reich and
                  Peter A. Calabresi and
                  Dzung L. Pham},
  title        = {Multiple Sclerosis Lesion Segmentation from Brain {MRI} via Fully
                  Convolutional Neural Networks},
  journal      = {CoRR},
  volume       = {abs/1803.09172},
  year         = {2018},
  url          = {http://arxiv.org/abs/1803.09172},
  eprinttype    = {arXiv},
  eprint       = {1803.09172},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1803-09172.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1804-05764,
  author       = {Samuel Remedios and
                  Dzung L. Pham and
                  John A. Butman and
                  Snehashis Roy},
  title        = {Classifying magnetic resonance image modalities with convolutional
                  neural networks},
  journal      = {CoRR},
  volume       = {abs/1804.05764},
  year         = {2018},
  url          = {http://arxiv.org/abs/1804.05764},
  eprinttype    = {arXiv},
  eprint       = {1804.05764},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1804-05764.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-10839,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Leighton Chan and
                  Dzung L. Pham},
  title        = {{TBI} Contusion Segmentation from {MRI} using Convolutional Neural
                  Networks},
  journal      = {CoRR},
  volume       = {abs/1807.10839},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.10839},
  eprinttype    = {arXiv},
  eprint       = {1807.10839},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-10839.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-10850,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Dzung L. Pham},
  title        = {Synthesizing {CT} from Ultrashort Echo-Time {MR} Images via Convolutional
                  Neural Networks},
  journal      = {CoRR},
  volume       = {abs/1807.10850},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.10850},
  eprinttype    = {arXiv},
  eprint       = {1807.10850},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-10850.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1811-07087,
  author       = {Dzung L. Pham and
                  Snehashis Roy},
  title        = {Alternating Segmentation and Simulation for Contrast Adaptive Tissue
                  Classification},
  journal      = {CoRR},
  volume       = {abs/1811.07087},
  year         = {2018},
  url          = {http://arxiv.org/abs/1811.07087},
  eprinttype    = {arXiv},
  eprint       = {1811.07087},
  timestamp    = {Sun, 25 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1811-07087.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/JogCRPP17,
  author       = {Amod Jog and
                  Aaron Carass and
                  Snehashis Roy and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Random forest regression for magnetic resonance image synthesis},
  journal      = {Medical Image Anal.},
  volume       = {35},
  pages        = {475--488},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.media.2016.08.009},
  doi          = {10.1016/J.MEDIA.2016.08.009},
  timestamp    = {Mon, 24 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/JogCRPP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/RoyBP17,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Dzung L. Pham},
  title        = {Robust skull stripping using multiple {MR} image contrasts insensitive
                  to pathology},
  journal      = {NeuroImage},
  volume       = {146},
  pages        = {132--147},
  year         = {2017},
  url          = {https://doi.org/10.1016/j.neuroimage.2016.11.017},
  doi          = {10.1016/J.NEUROIMAGE.2016.11.017},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/RoyBP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/XingWGPBSP17,
  author       = {Fangxu Xing and
                  Jonghye Woo and
                  Arnold D. Gomez and
                  Dzung L. Pham and
                  Philip V. Bayly and
                  Maureen L. Stone and
                  Jerry L. Prince},
  title        = {Phase Vector Incompressible Registration Algorithm for Motion Estimation
                  From Tagged Magnetic Resonance Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {36},
  number       = {10},
  pages        = {2116--2128},
  year         = {2017},
  url          = {https://doi.org/10.1109/TMI.2017.2723021},
  doi          = {10.1109/TMI.2017.2723021},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/XingWGPBSP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/GlaisterCPBP17,
  author       = {Jeffrey Glaister and
                  Aaron Carass and
                  Dzung L. Pham and
                  John A. Butman and
                  Jerry L. Prince},
  editor       = {Andrzej Kr{\'{o}}l and
                  Barjor Gimi},
  title        = {Automatic falx cerebri and tentorium cerebelli segmentation from magnetic
                  resonance images},
  booktitle    = {Medical Imaging 2017: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, Orlando, Florida, United States, 11-16 February
                  2017},
  series       = {{SPIE} Proceedings},
  volume       = {10137},
  pages        = {101371D},
  publisher    = {{SPIE}},
  year         = {2017},
  url          = {https://doi.org/10.1117/12.2255640},
  doi          = {10.1117/12.2255640},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mibam/GlaisterCPBP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/OguzCPRSCYSP17,
  author       = {Ipek Oguz and
                  Aaron Carass and
                  Dzung L. Pham and
                  Snehashis Roy and
                  Nagesh Subbana and
                  Peter A. Calabresi and
                  Paul A. Yushkevich and
                  Russell T. Shinohara and
                  Jerry L. Prince},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas and
                  Hugo J. Kuijf and
                  Bjoern H. Menze and
                  Mauricio Reyes},
  title        = {Dice Overlap Measures for Objects of Unknown Number: Application to
                  Lesion Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - Third International Workshop, BrainLes 2017, Held in Conjunction
                  with {MICCAI} 2017, Quebec City, QC, Canada, September 14, 2017, Revised
                  Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10670},
  pages        = {3--14},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-75238-9\_1},
  doi          = {10.1007/978-3-319-75238-9\_1},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/OguzCPRSCYSP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/CarassSLDBRPPE17,
  author       = {Aaron Carass and
                  Muhan Shao and
                  Xiang Li and
                  Blake Dewey and
                  Ari Blitz and
                  Snehashis Roy and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Lotta Maria Ellingsen},
  editor       = {Guorong Wu and
                  Brent C. Munsell and
                  Yiqiang Zhan and
                  Wenjia Bai and
                  Gerard Sanroma and
                  Pierrick Coup{\'{e}}},
  title        = {Whole Brain Parcellation with Pathology: Validation on Ventriculomegaly
                  Patients},
  booktitle    = {Patch-Based Techniques in Medical Imaging - Third International Workshop,
                  Patch-MI 2017, Held in Conjunction with {MICCAI} 2017, Quebec City,
                  QC, Canada, September 14, 2017, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10530},
  pages        = {20--28},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-67434-6\_3},
  doi          = {10.1007/978-3-319-67434-6\_3},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/CarassSLDBRPPE17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RoyBP17,
  author       = {Snehashis Roy and
                  John A. Butman and
                  Dzung L. Pham},
  editor       = {Sotirios A. Tsaftaris and
                  Ali Gooya and
                  Alejandro F. Frangi and
                  Jerry L. Prince},
  title        = {Synthesizing {CT} from Ultrashort Echo-Time {MR} Images via Convolutional
                  Neural Networks},
  booktitle    = {Simulation and Synthesis in Medical Imaging - Second International
                  Workshop, {SASHIMI} 2017, Held in Conjunction with {MICCAI} 2017,
                  Qu{\'{e}}bec City, QC, Canada, September 10, 2017, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {10557},
  pages        = {24--32},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-68127-6\_3},
  doi          = {10.1007/978-3-319-68127-6\_3},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RoyBP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/FleishmanVPRCYS17,
  author       = {Greg M. Fleishman and
                  Alessandra Valcarcel and
                  Dzung L. Pham and
                  Snehashis Roy and
                  Peter A. Calabresi and
                  Paul A. Yushkevich and
                  Russell T. Shinohara and
                  Ipek Oguz},
  editor       = {Alessandro Crimi and
                  Spyridon Bakas and
                  Hugo J. Kuijf and
                  Bjoern H. Menze and
                  Mauricio Reyes},
  title        = {Joint Intensity Fusion Image Synthesis Applied to Multiple Sclerosis
                  Lesion Segmentation},
  booktitle    = {Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain
                  Injuries - Third International Workshop, BrainLes 2017, Held in Conjunction
                  with {MICCAI} 2017, Quebec City, QC, Canada, September 14, 2017, Revised
                  Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10670},
  pages        = {43--54},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-75238-9\_4},
  doi          = {10.1007/978-3-319-75238-9\_4},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/FleishmanVPRCYS17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/GlaisterCPBP17,
  author       = {Jeffrey Glaister and
                  Aaron Carass and
                  Dzung L. Pham and
                  John A. Butman and
                  Jerry L. Prince},
  editor       = {Maxime Descoteaux and
                  Lena Maier{-}Hein and
                  Alfred M. Franz and
                  Pierre Jannin and
                  D. Louis Collins and
                  Simon Duchesne},
  title        = {Falx Cerebri Segmentation via Multi-atlas Boundary Fusion},
  booktitle    = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
                  2017 - 20th International Conference, Quebec City, QC, Canada, September
                  11-13, 2017, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {10433},
  pages        = {92--99},
  publisher    = {Springer},
  year         = {2017},
  url          = {https://doi.org/10.1007/978-3-319-66182-7\_11},
  doi          = {10.1007/978-3-319-66182-7\_11},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/GlaisterCPBP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/HuoPCRPPL16,
  author       = {Yuankai Huo and
                  Andrew J. Plassard and
                  Aaron Carass and
                  Susan M. Resnick and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Bennett A. Landman},
  title        = {Consistent cortical reconstruction and multi-atlas brain segmentation},
  journal      = {NeuroImage},
  volume       = {138},
  pages        = {197--210},
  year         = {2016},
  url          = {https://doi.org/10.1016/j.neuroimage.2016.05.030},
  doi          = {10.1016/J.NEUROIMAGE.2016.05.030},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/HuoPCRPPL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mibam/CastroWCMDLPB16,
  author       = {Marcelo Adri{\'{a}}n Castro and
                  Joshua P. Williford and
                  Martin R. Cota and
                  Judy M. MacLaren and
                  Bernard J. Dardzinski and
                  Lawrence L. Latour and
                  Dzung L. Pham and
                  John A. Butman},
  editor       = {Barjor Gimi and
                  Andrzej Kr{\'{o}}l},
  title        = {Quantification of traumatic meningeal injury using dynamic contrast
                  enhanced {(DCE)} fluid-attenuated inversion recovery {(FLAIR)} imaging},
  booktitle    = {Medical Imaging 2016: Biomedical Applications in Molecular, Structural,
                  and Functional Imaging, San Diego, California, United States, 27 February
                  - 3 March 2016},
  series       = {{SPIE} Proceedings},
  volume       = {9788},
  pages        = {97882P},
  publisher    = {{SPIE}},
  year         = {2016},
  url          = {https://doi.org/10.1117/12.2216902},
  doi          = {10.1117/12.2216902},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/mibam/CastroWCMDLPB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XingWGPBSP16,
  author       = {Fangxu Xing and
                  Jonghye Woo and
                  Arnold D. Gomez and
                  Dzung L. Pham and
                  Philip V. Bayly and
                  Maureen L. Stone and
                  Jerry L. Prince},
  editor       = {Maria A. Zuluaga and
                  Kanwal K. Bhatia and
                  Bernhard Kainz and
                  Mehdi Hedjazi Moghari and
                  Danielle F. Pace},
  title        = {Incompressible Phase Registration for Motion Estimation from Tagged
                  Magnetic Resonance Images},
  booktitle    = {Reconstruction, Segmentation, and Analysis of Medical Images - First
                  International Workshops, {RAMBO} 2016 and {HVSMR} 2016, Held in Conjunction
                  with {MICCAI} 2016, Athens, Greece, October 17, 2016, Revised Selected
                  Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {10129},
  pages        = {24--33},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-52280-7\_3},
  doi          = {10.1007/978-3-319-52280-7\_3},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/XingWGPBSP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RoyCJBP16,
  author       = {Snehashis Roy and
                  Yi{-}Yu Chou and
                  Amod Jog and
                  John A. Butman and
                  Dzung L. Pham},
  editor       = {Sotirios A. Tsaftaris and
                  Ali Gooya and
                  Alejandro F. Frangi and
                  Jerry L. Prince},
  title        = {Patch Based Synthesis of Whole Head {MR} Images: Application To {EPI}
                  Distortion Correction},
  booktitle    = {Simulation and Synthesis in Medical Imaging - First International
                  Workshop, {SASHIMI} 2016, Held in Conjunction with {MICCAI} 2016,
                  Athens, Greece, October 21, 2016, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9968},
  pages        = {146--156},
  year         = {2016},
  url          = {https://doi.org/10.1007/978-3-319-46630-9\_15},
  doi          = {10.1007/978-3-319-46630-9\_15},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RoyCJBP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/EllingsenRCBPP16,
  author       = {Lotta Maria Ellingsen and
                  Snehashis Roy and
                  Aaron Carass and
                  Ari Blitz and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Martin A. Styner and
                  Elsa D. Angelini},
  title        = {Segmentation and labeling of the ventricular system in normal pressure
                  hydrocephalus using patch-based tissue classification and multi-atlas
                  labeling},
  booktitle    = {Medical Imaging 2016: Image Processing, San Diego, California, USA,
                  February 27, 2016},
  series       = {{SPIE} Proceedings},
  volume       = {9784},
  pages        = {97840G},
  publisher    = {{SPIE}},
  year         = {2016},
  url          = {https://doi.org/10.1117/12.2216511},
  doi          = {10.1117/12.2216511},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/EllingsenRCBPP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/HuoCRPPL16,
  author       = {Yuankai Huo and
                  Aaron Carass and
                  Susan M. Resnick and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Bennett A. Landman},
  editor       = {Martin A. Styner and
                  Elsa D. Angelini},
  title        = {Combining multi-atlas segmentation with brain surface estimation},
  booktitle    = {Medical Imaging 2016: Image Processing, San Diego, California, USA,
                  February 27, 2016},
  series       = {{SPIE} Proceedings},
  volume       = {9784},
  pages        = {97840E},
  publisher    = {{SPIE}},
  year         = {2016},
  url          = {https://doi.org/10.1117/12.2216604},
  doi          = {10.1117/12.2216604},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/HuoCRPPL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/JogCRPP15,
  author       = {Amod Jog and
                  Aaron Carass and
                  Snehashis Roy and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {{MR} image synthesis by contrast learning on neighborhood ensembles},
  journal      = {Medical Image Anal.},
  volume       = {24},
  number       = {1},
  pages        = {63--76},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.media.2015.05.002},
  doi          = {10.1016/J.MEDIA.2015.05.002},
  timestamp    = {Mon, 24 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/JogCRPP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/RoyHSCRPP15,
  author       = {Snehashis Roy and
                  Qing He and
                  Elizabeth M. Sweeney and
                  Aaron Carass and
                  Daniel S. Reich and
                  Jerry L. Prince and
                  Dzung L. Pham},
  title        = {Subject-Specific Sparse Dictionary Learning for Atlas-Based Brain
                  {MRI} Segmentation},
  journal      = {{IEEE} J. Biomed. Health Informatics},
  volume       = {19},
  number       = {5},
  pages        = {1598--1609},
  year         = {2015},
  url          = {https://doi.org/10.1109/JBHI.2015.2439242},
  doi          = {10.1109/JBHI.2015.2439242},
  timestamp    = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/titb/RoyHSCRPP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/JogCPP15,
  author       = {Amod Jog and
                  Aaron Carass and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {S{\'{e}}bastien Ourselin and
                  Daniel C. Alexander and
                  Carl{-}Fredrik Westin and
                  Manuel Jorge Cardoso},
  title        = {Tree-Encoded Conditional Random Fields for Image Synthesis},
  booktitle    = {Information Processing in Medical Imaging - 24th International Conference,
                  {IPMI} 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3,
                  2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9123},
  pages        = {733--745},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-19992-4\_58},
  doi          = {10.1007/978-3-319-19992-4\_58},
  timestamp    = {Tue, 14 May 2019 10:00:52 +0200},
  biburl       = {https://dblp.org/rec/conf/ipmi/JogCPP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RoyCPP15,
  author       = {Snehashis Roy and
                  Aaron Carass and
                  Jerry L. Prince and
                  Dzung L. Pham},
  editor       = {Luping Zhou and
                  Li Wang and
                  Qian Wang and
                  Yinghuan Shi},
  title        = {Longitudinal Patch-Based Segmentation of Multiple Sclerosis White
                  Matter Lesions},
  booktitle    = {Machine Learning in Medical Imaging - 6th International Workshop,
                  {MLMI} 2015, Held in Conjunction with {MICCAI} 2015, Munich, Germany,
                  October 5, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9352},
  pages        = {194--202},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-24888-2\_24},
  doi          = {10.1007/978-3-319-24888-2\_24},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RoyCPP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RoyWDBP15,
  author       = {Snehashis Roy and
                  Sean Wilkes and
                  Ramon Diaz{-}Arrastia and
                  John A. Butman and
                  Dzung L. Pham},
  editor       = {S{\'{e}}bastien Ourselin and
                  Martin Andreas Styner},
  title        = {Intraparenchymal hemorrhage segmentation from clinical head {CT} of
                  patients with traumatic brain injury},
  booktitle    = {Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February
                  24-26, 2015},
  series       = {{SPIE} Proceedings},
  volume       = {9413},
  pages        = {94130I},
  publisher    = {{SPIE}},
  year         = {2015},
  url          = {https://doi.org/10.1117/12.2082199},
  doi          = {10.1117/12.2082199},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/RoyWDBP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/JogCPP15,
  author       = {Amod Jog and
                  Aaron Carass and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {S{\'{e}}bastien Ourselin and
                  Martin Andreas Styner},
  title        = {Multi-output decision trees for lesion segmentation in multiple sclerosis},
  booktitle    = {Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February
                  24-26, 2015},
  series       = {{SPIE} Proceedings},
  volume       = {9413},
  pages        = {94131C},
  publisher    = {{SPIE}},
  year         = {2015},
  url          = {https://doi.org/10.1117/12.2082157},
  doi          = {10.1117/12.2082157},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/JogCPP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RoyJSBP15,
  author       = {Snehashis Roy and
                  Amod Jog and
                  Elizabeth M. Sweeney and
                  John A. Butman and
                  Dzung L. Pham},
  editor       = {S{\'{e}}bastien Ourselin and
                  Martin Andreas Styner},
  title        = {Cerebral microbleed segmentation from susceptibility weighted images},
  booktitle    = {Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February
                  24-26, 2015},
  series       = {{SPIE} Proceedings},
  volume       = {9413},
  pages        = {94131E},
  publisher    = {{SPIE}},
  year         = {2015},
  url          = {https://doi.org/10.1117/12.2082237},
  doi          = {10.1117/12.2082237},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/RoyJSBP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/JogCPP14,
  author       = {Amod Jog and
                  Aaron Carass and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Random forest {FLAIR} reconstruction from T1, T2, and PD-weighted
                  {MRI}},
  booktitle    = {{IEEE} 11th International Symposium on Biomedical Imaging, {ISBI}
                  2014, April 29 - May 2, 2014, Beijing, Chin, Beijing, China},
  pages        = {1079--1082},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/ISBI.2014.6868061},
  doi          = {10.1109/ISBI.2014.6868061},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/JogCPP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RoyCPP14,
  author       = {Snehashis Roy and
                  Aaron Carass and
                  Jerry L. Prince and
                  Dzung L. Pham},
  editor       = {Guorong Wu and
                  Daoqiang Zhang and
                  Luping Zhou},
  title        = {Subject Specific Sparse Dictionary Learning for Atlas Based Brain
                  {MRI} Segmentation},
  booktitle    = {Machine Learning in Medical Imaging - 5th International Workshop,
                  {MLMI} 2014, Held in Conjunction with {MICCAI} 2014, Boston, MA, USA,
                  September 14, 2014. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {8679},
  pages        = {248--255},
  publisher    = {Springer},
  year         = {2014},
  url          = {https://doi.org/10.1007/978-3-319-10581-9\_31},
  doi          = {10.1007/978-3-319-10581-9\_31},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RoyCPP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/RoyHCJCRPP14,
  author       = {Snehashis Roy and
                  Qing He and
                  Aaron Carass and
                  Amod Jog and
                  Jennifer L. Cuzzocreo and
                  Daniel S. Reich and
                  Jerry L. Prince and
                  Dzung L. Pham},
  editor       = {S{\'{e}}bastien Ourselin and
                  Martin A. Styner},
  title        = {Example based lesion segmentation},
  booktitle    = {Medical Imaging 2014: Image Processing, San Diego, California, USA,
                  February 16-18, 2014},
  series       = {{SPIE} Proceedings},
  volume       = {9034},
  pages        = {90341Y},
  publisher    = {{SPIE}},
  year         = {2014},
  url          = {https://doi.org/10.1117/12.2043917},
  doi          = {10.1117/12.2043917},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/RoyHCJCRPP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ChenCONPRP13,
  author       = {Min Chen and
                  Aaron Carass and
                  Jiwon Oh and
                  Govind Nair and
                  Dzung L. Pham and
                  Daniel S. Reich and
                  Jerry L. Prince},
  title        = {Automatic magnetic resonance spinal cord segmentation with topology
                  constraints for variable fields of view},
  journal      = {NeuroImage},
  volume       = {83},
  pages        = {1051--1062},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.neuroimage.2013.07.060},
  doi          = {10.1016/J.NEUROIMAGE.2013.07.060},
  timestamp    = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ChenCONPRP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/LandmanBCCRSYKPBRP13,
  author       = {Bennett A. Landman and
                  John A. Bogovic and
                  Aaron Carass and
                  Min Chen and
                  Snehashis Roy and
                  Navid Shiee and
                  Zhen Yang and
                  Bhaskar Kishore and
                  Dzung L. Pham and
                  Pierre{-}Louis Bazin and
                  Susan M. Resnick and
                  Jerry L. Prince},
  title        = {System for Integrated Neuroimaging Analysis and Processing of Structure},
  journal      = {Neuroinformatics},
  volume       = {11},
  number       = {1},
  pages        = {91--103},
  year         = {2013},
  url          = {https://doi.org/10.1007/s12021-012-9159-9},
  doi          = {10.1007/S12021-012-9159-9},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ni/LandmanBCCRSYKPBRP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/RoyCSPCRP13,
  author       = {Snehashis Roy and
                  Aaron Carass and
                  Navid Shiee and
                  Dzung L. Pham and
                  Peter A. Calabresi and
                  Daniel S. Reich and
                  Jerry L. Prince},
  title        = {Longitudinal intensity normalization in the presence of multiple sclerosis
                  lesions},
  booktitle    = {10th {IEEE} International Symposium on Biomedical Imaging: From Nano
                  to Macro, {ISBI} 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings},
  pages        = {1384--1387},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/ISBI.2013.6556791},
  doi          = {10.1109/ISBI.2013.6556791},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/RoyCSPCRP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/HeSRCP13,
  author       = {Qing He and
                  Navid Shiee and
                  Daniel S. Reich and
                  Peter A. Calabresi and
                  Dzung L. Pham},
  title        = {Intensity standardization of longitudinal images using 4D clustering},
  booktitle    = {10th {IEEE} International Symposium on Biomedical Imaging: From Nano
                  to Macro, {ISBI} 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings},
  pages        = {1388--1391},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/ISBI.2013.6556792},
  doi          = {10.1109/ISBI.2013.6556792},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/HeSRCP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/ChenCRCPP13,
  author       = {Min Chen and
                  Aaron Carass and
                  Daniel S. Reich and
                  Peter A. Calabresi and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {S{\'{e}}bastien Ourselin and
                  David R. Haynor},
  title        = {Voxel-wise displacement as independent features in classification
                  of multiple sclerosis},
  booktitle    = {Medical Imaging 2013: Image Processing, Lake Buena Vista (Orlando
                  Area), Florida, USA, February 10-12, 2013},
  series       = {{SPIE} Proceedings},
  volume       = {8669},
  pages        = {86690K},
  publisher    = {{SPIE}},
  year         = {2013},
  url          = {https://doi.org/10.1117/12.2007150},
  doi          = {10.1117/12.2007150},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/ChenCRCPP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/prni/LeeZSCCP13,
  author       = {Seonjoo Lee and
                  Vadim Zipunnikov and
                  Navid Shiee and
                  Ciprian M. Crainiceanu and
                  Brian S. Caffo and
                  Dzung L. Pham},
  title        = {Clustering of High Dimensional Longitudinal Imaging Data},
  booktitle    = {International Workshop on Pattern Recognition in Neuroimaging, {PRNI}
                  2013, Philadelphia, PA, USA, June 22-24, 2013},
  pages        = {33--36},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/PRNI.2013.18},
  doi          = {10.1109/PRNI.2013.18},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/prni/LeeZSCCP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/PrincePM11,
  author       = {Jerry L. Prince and
                  Dzung L. Pham and
                  Kyle J. Myers},
  title        = {Editorial},
  journal      = {Medical Image Anal.},
  volume       = {15},
  number       = {4},
  pages        = {601--602},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.media.2011.05.011},
  doi          = {10.1016/J.MEDIA.2011.05.011},
  timestamp    = {Mon, 24 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/PrincePM11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/BazinYBSRPP11,
  author       = {Pierre{-}Louis Bazin and
                  Chuyang Ye and
                  John A. Bogovic and
                  Navid Shiee and
                  Daniel S. Reich and
                  Jerry L. Prince and
                  Dzung L. Pham},
  title        = {Direct segmentation of the major white matter tracts in diffusion
                  tensor images},
  journal      = {NeuroImage},
  volume       = {58},
  number       = {2},
  pages        = {458--468},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.neuroimage.2011.06.020},
  doi          = {10.1016/J.NEUROIMAGE.2011.06.020},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/BazinYBSRPP11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/ShieeBCBP11,
  author       = {Navid Shiee and
                  Pierre{-}Louis Bazin and
                  Jennifer L. Cuzzocreo and
                  Ari Blitz and
                  Dzung L. Pham},
  editor       = {G{\'{a}}bor Sz{\'{e}}kely and
                  Horst K. Hahn},
  title        = {Segmentation of Brain Images Using Adaptive Atlases with Application
                  to Ventriculomegaly},
  booktitle    = {Information Processing in Medical Imaging - 22nd International Conference,
                  {IPMI} 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {6801},
  pages        = {1--12},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-22092-0\_1},
  doi          = {10.1007/978-3-642-22092-0\_1},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ipmi/ShieeBCBP11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ShieeBCRP11,
  author       = {Navid Shiee and
                  Pierre{-}Louis Bazin and
                  Peter A. Calabresi and
                  Daniel S. Reich and
                  Dzung L. Pham},
  title        = {Fiber tractogrophy and tract segmentation in multiple sclerosis lesions},
  booktitle    = {Proceedings of the 8th {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011,
                  Chicago, Illinois, {USA}},
  pages        = {1488--1491},
  publisher    = {{IEEE}},
  year         = {2011},
  url          = {https://doi.org/10.1109/ISBI.2011.5872682},
  doi          = {10.1109/ISBI.2011.5872682},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/ShieeBCRP11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/ShieeBORCP10,
  author       = {Navid Shiee and
                  Pierre{-}Louis Bazin and
                  Arzu Ozturk and
                  Daniel S. Reich and
                  Peter A. Calabresi and
                  Dzung L. Pham},
  title        = {A topology-preserving approach to the segmentation of brain images
                  with multiple sclerosis lesions},
  journal      = {NeuroImage},
  volume       = {49},
  number       = {2},
  pages        = {1524--1535},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.neuroimage.2009.09.005},
  doi          = {10.1016/J.NEUROIMAGE.2009.09.005},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/neuroimage/ShieeBORCP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/LucasBCBPPL10,
  author       = {Blake C. Lucas and
                  John A. Bogovic and
                  Aaron Carass and
                  Pierre{-}Louis Bazin and
                  Jerry L. Prince and
                  Dzung L. Pham and
                  Bennett A. Landman},
  title        = {The Java Image Science Toolkit {(JIST)} for Rapid Prototyping and
                  Publishing of Neuroimaging Software},
  journal      = {Neuroinformatics},
  volume       = {8},
  number       = {1},
  pages        = {5--17},
  year         = {2010},
  url          = {https://doi.org/10.1007/s12021-009-9061-2},
  doi          = {10.1007/S12021-009-9061-2},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ni/LucasBCBPPL10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ni/LucasBCBPPL10a,
  author       = {Blake C. Lucas and
                  John A. Bogovic and
                  Aaron Carass and
                  Pierre{-}Louis Bazin and
                  Jerry L. Prince and
                  Dzung L. Pham and
                  Bennett A. Landman},
  title        = {Erratum to: The Java Image Science Toolkit {(JIST)} for Rapid Prototyping
                  and Publishing of Neuroimaging Software},
  journal      = {Neuroinformatics},
  volume       = {8},
  number       = {1},
  pages        = {19},
  year         = {2010},
  url          = {https://doi.org/10.1007/s12021-010-9065-y},
  doi          = {10.1007/S12021-010-9065-Y},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ni/LucasBCBPPL10a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/spm/PhamBP10,
  author       = {Dzung L. Pham and
                  Pierre{-}Louis Bazin and
                  Jerry L. Prince},
  title        = {Digital Topology in Brain Imaging},
  journal      = {{IEEE} Signal Process. Mag.},
  volume       = {27},
  number       = {4},
  pages        = {51--59},
  year         = {2010},
  url          = {https://doi.org/10.1109/MSP.2010.936729},
  doi          = {10.1109/MSP.2010.936729},
  timestamp    = {Wed, 14 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/spm/PhamBP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/RoyCSPP10,
  author       = {Snehashis Roy and
                  Aaron Carass and
                  Navid Shiee and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {{MR} contrast synthesis for lesion segmentation},
  booktitle    = {Proceedings of the 2010 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April,
                  2010},
  pages        = {932--935},
  publisher    = {{IEEE}},
  year         = {2010},
  url          = {https://doi.org/10.1109/ISBI.2010.5490140},
  doi          = {10.1109/ISBI.2010.5490140},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/RoyCSPP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ShieeBRP09,
  author       = {Navid Shiee and
                  Pierre{-}Louis Bazin and
                  Daniel S. Reich and
                  Dzung L. Pham},
  title        = {Automated Reconstruction of the Cerebral Cortex in Multiple Sclerosis
                  Patients},
  booktitle    = {Proceedings of the 2009 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Boston, MA, USA, June 28 - July 1, 2009},
  pages        = {1334--1337},
  publisher    = {{IEEE}},
  year         = {2009},
  url          = {https://doi.org/10.1109/ISBI.2009.5193311},
  doi          = {10.1109/ISBI.2009.5193311},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/ShieeBRP09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BazinBRPP09,
  author       = {Pierre{-}Louis Bazin and
                  John A. Bogovic and
                  Daniel S. Reich and
                  Jerry L. Prince and
                  Dzung L. Pham},
  editor       = {Guang{-}Zhong Yang and
                  David J. Hawkes and
                  Daniel Rueckert and
                  J. Alison Noble and
                  Christopher J. Taylor},
  title        = {Belief Propagation Based Segmentation of White Matter Tracts in {DTI}},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2009, 12th International Conference, London, UK, September 20-24,
                  2009, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5761},
  pages        = {943--950},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-04268-3\_116},
  doi          = {10.1007/978-3-642-04268-3\_116},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/BazinBRPP09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ipmi/2009,
  editor       = {Jerry L. Prince and
                  Dzung L. Pham and
                  Kyle J. Myers},
  title        = {Information Processing in Medical Imaging, 21st International Conference,
                  {IPMI} 2009, Williamsburg, VA, USA, July 5-10, 2009. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {5636},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-02498-6},
  doi          = {10.1007/978-3-642-02498-6},
  isbn         = {978-3-642-02497-9},
  timestamp    = {Tue, 14 May 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ipmi/2009.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/BazinP08,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  title        = {Homeomorphic brain image segmentation with topological and statistical
                  atlases},
  journal      = {Medical Image Anal.},
  volume       = {12},
  number       = {5},
  pages        = {616--625},
  year         = {2008},
  url          = {https://doi.org/10.1016/j.media.2008.06.008},
  doi          = {10.1016/J.MEDIA.2008.06.008},
  timestamp    = {Mon, 24 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/mia/BazinP08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/RoyACBPP08,
  author       = {Snehashis Roy and
                  Harsh K. Agarwal and
                  Aaron Carass and
                  Ying Bai and
                  Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Fuzzy c-means with variable compactness},
  booktitle    = {Proceedings of the 2008 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Paris, France, May 14-17, 2008},
  pages        = {452--455},
  publisher    = {{IEEE}},
  year         = {2008},
  url          = {https://doi.org/10.1109/ISBI.2008.4541030},
  doi          = {10.1109/ISBI.2008.4541030},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/RoyACBPP08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/BazinP07,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  title        = {Topology correction of segmented medical images using a fast marching
                  algorithm},
  journal      = {Comput. Methods Programs Biomed.},
  volume       = {88},
  number       = {2},
  pages        = {182--190},
  year         = {2007},
  url          = {https://doi.org/10.1016/j.cmpb.2007.08.006},
  doi          = {10.1016/J.CMPB.2007.08.006},
  timestamp    = {Thu, 20 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cmpb/BazinP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/BazinP07,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  title        = {Topology-Preserving Tissue Classification of Magnetic Resonance Brain
                  Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {26},
  number       = {4},
  pages        = {487--496},
  year         = {2007},
  url          = {https://doi.org/10.1109/TMI.2007.893283},
  doi          = {10.1109/TMI.2007.893283},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/BazinP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/BazinEP07,
  author       = {Pierre{-}Louis Bazin and
                  Lotta Maria Ellingsen and
                  Dzung L. Pham},
  editor       = {Nico Karssemeijer and
                  Boudewijn P. F. Lelieveldt},
  title        = {Digital Homeomorphisms in Deformable Registration},
  booktitle    = {Information Processing in Medical Imaging, 20th International Conference,
                  {IPMI} 2007, Kerkrade, The Netherlands, July 2-6, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4584},
  pages        = {211--222},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-73273-0\_18},
  doi          = {10.1007/978-3-540-73273-0\_18},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ipmi/BazinEP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BazinP07,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  editor       = {Nicholas Ayache and
                  S{\'{e}}bastien Ourselin and
                  Anthony J. Maeder},
  title        = {Statistical and Topological Atlas Based Brain Image Segmentation},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2007, 10th International Conference, Brisbane, Australia, October
                  29 - November 2, 2007, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {4791},
  pages        = {94--101},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-75757-3\_12},
  doi          = {10.1007/978-3-540-75757-3\_12},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/BazinP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/BazinP06,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  title        = {{TOADS:} topology-preserving, anatomy-driven segmentation},
  booktitle    = {Proceedings of the 2006 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 6-9 April 2006},
  pages        = {327--330},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/ISBI.2006.1624919},
  doi          = {10.1109/ISBI.2006.1624919},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/BazinP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/PhamB06,
  author       = {Dzung L. Pham and
                  Pierre{-}Louis Bazin},
  title        = {Simultaneous registration and tissue classification using clustering
                  algorithms},
  booktitle    = {Proceedings of the 2006 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 6-9 April 2006},
  pages        = {650--653},
  publisher    = {{IEEE}},
  year         = {2006},
  url          = {https://doi.org/10.1109/ISBI.2006.1625000},
  doi          = {10.1109/ISBI.2006.1625000},
  timestamp    = {Thu, 25 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/PhamB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/BazinP05,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  editor       = {Gary E. Christensen and
                  Milan Sonka},
  title        = {Topology Preserving Tissue Classification with Fast Marching and Topology
                  Templates},
  booktitle    = {Information Processing in Medical Imaging, 19th International Conference,
                  {IPMI} 2005, Glenwood Springs, CO, USA, July 10-15, 2005, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {3565},
  pages        = {234--245},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11505730\_20},
  doi          = {10.1007/11505730\_20},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ipmi/BazinP05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BazinP05,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  editor       = {James S. Duncan and
                  Guido Gerig},
  title        = {Topology Correction Using Fast Marching Methods and Its Application
                  to Brain Segmentation},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
                  2005, 8th International Conference, Palm Springs, CA, USA, October
                  26-29, 2005, Proceedings, Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3750},
  pages        = {484--491},
  publisher    = {Springer},
  year         = {2005},
  url          = {https://doi.org/10.1007/11566489\_60},
  doi          = {10.1007/11566489\_60},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/BazinP05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/BaiHPP05,
  author       = {Ying Bai and
                  Xiao Han and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {J. Michael Fitzpatrick and
                  Joseph M. Reinhardt},
  title        = {Super-resolved multi-channel fuzzy segmentation of {MR} brain images},
  booktitle    = {Medical Imaging 2005: Image Processing, San Diego, California, United
                  States, 12-17 February 2005},
  series       = {{SPIE} Proceedings},
  volume       = {5747},
  publisher    = {{SPIE}},
  year         = {2005},
  url          = {https://doi.org/10.1117/12.595357},
  doi          = {10.1117/12.595357},
  timestamp    = {Thu, 12 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/BaiHPP05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/BazinPGM05,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham and
                  William Gandler and
                  Matthew J. McAuliffe},
  editor       = {J. Michael Fitzpatrick and
                  Joseph M. Reinhardt},
  title        = {Free software tools for atlas-based volumetric neuroimage analysis},
  booktitle    = {Medical Imaging 2005: Image Processing, San Diego, California, United
                  States, 12-17 February 2005},
  series       = {{SPIE} Proceedings},
  volume       = {5747},
  publisher    = {{SPIE}},
  year         = {2005},
  url          = {https://doi.org/10.1117/12.595602},
  doi          = {10.1117/12.595602},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/BazinPGM05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/HanPTRXP04,
  author       = {Xiao Han and
                  Dzung L. Pham and
                  Duygu Tosun and
                  Maryam E. Rettmann and
                  Chenyang Xu and
                  Jerry L. Prince},
  title        = {{CRUISE:} Cortical reconstruction using implicit surface evolution},
  journal      = {NeuroImage},
  volume       = {23},
  number       = {3},
  pages        = {997--1012},
  year         = {2004},
  url          = {https://doi.org/10.1016/j.neuroimage.2004.06.043},
  doi          = {10.1016/J.NEUROIMAGE.2004.06.043},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/HanPTRXP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/Pham04,
  author       = {Dzung L. Pham},
  title        = {Integrating Intensity and Boundary Information for Tissue Classification},
  booktitle    = {17th {IEEE} Symposium on Computer-Based Medical Systems {(CBMS} 2004),
                  24-25 June 2004, Bethesda, MD, {USA}},
  pages        = {216--220},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CBMS.2004.1311717},
  doi          = {10.1109/CBMS.2004.1311717},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/Pham04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/PhamP04,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Robust Unsupervised Tissue Classification in {MR} Images},
  booktitle    = {Proceedings of the 2004 {IEEE} International Symposium on Biomedical
                  Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004},
  pages        = {109--112},
  publisher    = {{IEEE}},
  year         = {2004},
  url          = {https://doi.org/10.1109/ISBI.2004.1398486},
  doi          = {10.1109/ISBI.2004.1398486},
  timestamp    = {Wed, 04 Oct 2023 16:23:55 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/PhamP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BazinP04,
  author       = {Pierre{-}Louis Bazin and
                  Dzung L. Pham},
  editor       = {Christian Barillot and
                  David R. Haynor and
                  Pierre Hellier},
  title        = {Topology Smoothing for Segmentation and Surface Reconstruction},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention -- {MICCAI}
                  2004, 7th International Conference Saint-Malo, France, September 26-29,
                  2004, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3216},
  pages        = {111--118},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-30135-6\_14},
  doi          = {10.1007/978-3-540-30135-6\_14},
  timestamp    = {Tue, 14 May 2019 10:00:49 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/BazinP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PhamB04,
  author       = {Dzung L. Pham and
                  Pierre{-}Louis Bazin},
  editor       = {Christian Barillot and
                  David R. Haynor and
                  Pierre Hellier},
  title        = {Simultaneous Boundary and Partial Volume Estimation in Medical Images},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention -- {MICCAI}
                  2004, 7th International Conference Saint-Malo, France, September 26-29,
                  2004, Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {3216},
  pages        = {119--126},
  publisher    = {Springer},
  year         = {2004},
  url          = {https://doi.org/10.1007/978-3-540-30135-6\_15},
  doi          = {10.1007/978-3-540-30135-6\_15},
  timestamp    = {Sun, 04 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/PhamB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/BehnkeRPSRDP03,
  author       = {Kirsten Judith Behnke and
                  Maryam E. Rettmann and
                  Dzung L. Pham and
                  Dinggang Shen and
                  Susan M. Resnick and
                  Christos Davatzikos and
                  Jerry L. Prince},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {Automatic classification of sulcal regions of the human brain cortex
                  using pattern recognition},
  booktitle    = {Medical Imaging 2003: Image Processing, San Diego, California, United
                  States, 15-20 February 2003},
  series       = {{SPIE} Proceedings},
  volume       = {5032},
  publisher    = {{SPIE}},
  year         = {2003},
  url          = {https://doi.org/10.1117/12.480834},
  doi          = {10.1117/12.480834},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/BehnkeRPSRDP03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/Pham02,
  author       = {Dzung L. Pham},
  title        = {Fuzzy clustering with spatial constraints},
  booktitle    = {Proceedings of the 2002 International Conference on Image Processing,
                  {ICIP} 2002, Rochester, New York, USA, September 22-25, 2002},
  pages        = {65--68},
  publisher    = {{IEEE}},
  year         = {2002},
  url          = {https://doi.org/10.1109/ICIP.2002.1039888},
  doi          = {10.1109/ICIP.2002.1039888},
  timestamp    = {Wed, 16 Oct 2019 14:14:52 +0200},
  biburl       = {https://dblp.org/rec/conf/icip/Pham02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/YuPSHRD02,
  author       = {Songyang Yu and
                  Dzung L. Pham and
                  Dinggang Shen and
                  Edward Herskovits and
                  Susan M. Resnick and
                  Christos Davatzikos},
  title        = {Automatic segmentation of white matter lesions in T1-weighted brain
                  {MR} images},
  booktitle    = {Proceedings of the 2002 {IEEE} International Symposium on Biomedical
                  Imaging, Ritz-Carlton Hotel, Washington, DC, USA, 7-10 June 2002},
  pages        = {253--256},
  publisher    = {{IEEE}},
  year         = {2002},
  url          = {https://doi.org/10.1109/ISBI.2002.1029241},
  doi          = {10.1109/ISBI.2002.1029241},
  timestamp    = {Wed, 04 Oct 2023 17:01:25 +0200},
  biburl       = {https://dblp.org/rec/conf/isbi/YuPSHRD02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/PhamHRXTRP02,
  author       = {Dzung L. Pham and
                  Xiao Han and
                  Maryam E. Rettmann and
                  Chenyang Xu and
                  Duygu Tosun and
                  Susan M. Resnick and
                  Jerry L. Prince},
  editor       = {Milan Sonka and
                  J. Michael Fitzpatrick},
  title        = {New approaches for measuring changes in the cortical surface using
                  an automatic reconstruction algorithm},
  booktitle    = {Medical Imaging 2002: Image Processing, San Diego, California, United
                  States, 23-28 February 2002},
  series       = {{SPIE} Proceedings},
  volume       = {4684},
  publisher    = {{SPIE}},
  year         = {2002},
  url          = {https://doi.org/10.1117/12.467145},
  doi          = {10.1117/12.467145},
  timestamp    = {Thu, 12 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miip/PhamHRXTRP02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cviu/Pham01,
  author       = {Dzung L. Pham},
  title        = {Spatial Models for Fuzzy Clustering},
  journal      = {Comput. Vis. Image Underst.},
  volume       = {84},
  number       = {2},
  pages        = {285--297},
  year         = {2001},
  url          = {https://doi.org/10.1006/cviu.2001.0951},
  doi          = {10.1006/CVIU.2001.0951},
  timestamp    = {Fri, 21 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cviu/Pham01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/Pham01,
  author       = {Dzung L. Pham},
  title        = {Robust Fuzzy Segmentation of Magnetic Resonance Images},
  booktitle    = {14th {IEEE} Symposium on Computer-Based Medical Systems {(CBMS} 2001),
                  26-27 July 2001, Bethesda, MD, {USA}},
  pages        = {127--131},
  publisher    = {{IEEE} Computer Society},
  year         = {2001},
  url          = {https://doi.org/10.1109/CBMS.2001.941709},
  doi          = {10.1109/CBMS.2001.941709},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/Pham01.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/Pham00,
  author       = {Dzung L. Pham},
  title        = {Edge-Adaptive Clustering for Unsupervised Image Segmentation},
  booktitle    = {Proceedings of the 2000 International Conference on Image Processing,
                  {ICIP} 2000, Vancouver, BC, Canada, September 10-13, 2000},
  pages        = {816--819},
  publisher    = {{IEEE}},
  year         = {2000},
  url          = {https://doi.org/10.1109/ICIP.2000.901084},
  doi          = {10.1109/ICIP.2000.901084},
  timestamp    = {Wed, 16 Oct 2019 14:14:52 +0200},
  biburl       = {https://dblp.org/rec/conf/icip/Pham00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/YuXRPP00,
  author       = {Daphne N. Yu and
                  Chenyang Xu and
                  Maryam E. Rettmann and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Kenneth M. Hanson},
  title        = {Quantitative validation of a deformable cortical surface model},
  booktitle    = {Medical Imaging 2000: Image Processing, San Diego, CA, United States,
                  12-18 February 2000},
  series       = {{SPIE} Proceedings},
  volume       = {3979},
  publisher    = {{SPIE}},
  year         = {2000},
  url          = {https://doi.org/10.1117/12.387673},
  doi          = {10.1117/12.387673},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/YuXRPP00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/prl/PhamP99,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  title        = {An adaptive fuzzy C-means algorithm for image segmentation in the
                  presence of intensity inhomogeneities},
  journal      = {Pattern Recognit. Lett.},
  volume       = {20},
  number       = {1},
  pages        = {57--68},
  year         = {1999},
  url          = {https://doi.org/10.1016/S0167-8655(98)00121-4},
  doi          = {10.1016/S0167-8655(98)00121-4},
  timestamp    = {Sat, 22 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/prl/PhamP99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/XuPRYP99,
  author       = {Chenyang Xu and
                  Dzung L. Pham and
                  Maryam E. Rettmann and
                  Daphne N. Yu and
                  Jerry L. Prince},
  title        = {Reconstruction of the Human Cerebral Cortex from Magnetic Resonance
                  Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {18},
  number       = {6},
  pages        = {467--480},
  year         = {1999},
  url          = {https://doi.org/10.1109/42.781013},
  doi          = {10.1109/42.781013},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/XuPRYP99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/PhamP99,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Adaptive Fuzzy Segmentation of Magnetic Resonance Images},
  journal      = {{IEEE} Trans. Medical Imaging},
  volume       = {18},
  number       = {9},
  pages        = {737--752},
  year         = {1999},
  url          = {https://doi.org/10.1109/42.802752},
  doi          = {10.1109/42.802752},
  timestamp    = {Thu, 18 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tmi/PhamP99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/PhamP99,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Attila Kuba and
                  Martin S{\'{a}}mal and
                  Andrew Todd{-}Pokropek},
  title        = {An Adaptive Fuzzy Segmentation Algorithm for Three-Dimensional Magnetic
                  Resonance Images},
  booktitle    = {Information Processing in Medical Imaging, 16th International Conference,
                  IPMI'99, Visegr{\'{a}}d, Hungary, June 28 - July 2, 1999, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1613},
  pages        = {140--153},
  publisher    = {Springer},
  year         = {1999},
  url          = {https://doi.org/10.1007/3-540-48714-X\_11},
  doi          = {10.1007/3-540-48714-X\_11},
  timestamp    = {Tue, 14 May 2019 10:00:52 +0200},
  biburl       = {https://dblp.org/rec/conf/ipmi/PhamP99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RettmannXPP99,
  author       = {Maryam E. Rettmann and
                  Chenyang Xu and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Christopher J. Taylor and
                  Alan C. F. Colchester},
  title        = {Automated Segmentation of Sulcal Regions},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'99,
                  Second International Conference, Cambridge, UK, September 19-22, 1999,
                  Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1679},
  pages        = {158--167},
  publisher    = {Springer},
  year         = {1999},
  url          = {https://doi.org/10.1007/10704282\_17},
  doi          = {10.1007/10704282\_17},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RettmannXPP99.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/PhamP98,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  title        = {Partial Volume Estimation and the Fuzzy C-means Algorithm},
  booktitle    = {Proceedings of the 1998 {IEEE} International Conference on Image Processing,
                  ICIP-98, Chicago, Illinois, USA, October 4-7, 1998},
  pages        = {819--822},
  publisher    = {{IEEE} Computer Society},
  year         = {1998},
  timestamp    = {Wed, 16 Oct 2019 14:14:52 +0200},
  biburl       = {https://dblp.org/rec/conf/icip/PhamP98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuPPEY98,
  author       = {Chenyang Xu and
                  Dzung L. Pham and
                  Jerry L. Prince and
                  Maryam E. Etemad and
                  Daphne N. Yu},
  editor       = {William M. Wells III and
                  Alan C. F. Colchester and
                  Scott L. Delp},
  title        = {Reconstruction of the Central Layer of the Human Cerebral Cortex from
                  {MR} Images},
  booktitle    = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'98,
                  First International Conference, Cambridge, MA, USA, October 11-13,
                  1998, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1496},
  pages        = {481--488},
  publisher    = {Springer},
  year         = {1998},
  url          = {https://doi.org/10.1007/BFb0056233},
  doi          = {10.1007/BFB0056233},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/XuPPEY98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/PhamP98,
  author       = {Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {Kenneth M. Hanson},
  title        = {Adaptive fuzzy c-means algorithm for image segmentation in the presence
                  of intensity inhomogeneities},
  booktitle    = {Medical Imaging 1998: Image Processing, San Diego, CA, United States,
                  21-26 February 1998},
  series       = {{SPIE} Proceedings},
  volume       = {3338},
  publisher    = {{SPIE}},
  year         = {1998},
  url          = {https://doi.org/10.1117/12.310864},
  doi          = {10.1117/12.310864},
  timestamp    = {Wed, 25 Jul 2018 18:08:09 +0200},
  biburl       = {https://dblp.org/rec/conf/miip/PhamP98.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijprai/PhamPXD97,
  author       = {Dzung L. Pham and
                  Jerry L. Prince and
                  Chenyang Xu and
                  Azar P. Dagher},
  title        = {An Automated Technique for Statistical Characterization of Brain Tissues
                  in Magnetic Resonance Imaging},
  journal      = {Int. J. Pattern Recognit. Artif. Intell.},
  volume       = {11},
  number       = {8},
  pages        = {1189--1211},
  year         = {1997},
  url          = {https://doi.org/10.1142/S021800149700055X},
  doi          = {10.1142/S021800149700055X},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijprai/PhamPXD97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/XuPP97,
  author       = {Chenyang Xu and
                  Dzung L. Pham and
                  Jerry L. Prince},
  editor       = {James S. Duncan and
                  Gene Gindi},
  title        = {Finding the Brain Cortex Using Fuzzy Segmentation, Isosurfaces, and
                  Deformable Surface Models},
  booktitle    = {Information Processing in Medical Imaging, 15th International Conference,
                  IPMI'97, Poultney, Vermont, USA, June 9-13, 1997, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1230},
  pages        = {399--404},
  publisher    = {Springer},
  year         = {1997},
  url          = {https://doi.org/10.1007/3-540-63046-5\_33},
  doi          = {10.1007/3-540-63046-5\_33},
  timestamp    = {Tue, 01 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ipmi/XuPP97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}