BibTeX records: Jian Peng 0001

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@article{DBLP:journals/bioinformatics/LuoYZBP19,
  author    = {Yunan Luo and
               Yun William Yu and
               Jianyang Zeng and
               Bonnie Berger and
               Jian Peng},
  title     = {Metagenomic binning through low-density hashing},
  journal   = {Bioinformatics},
  volume    = {35},
  number    = {2},
  pages     = {219--226},
  year      = {2019},
  url       = {https://doi.org/10.1093/bioinformatics/bty611},
  doi       = {10.1093/bioinformatics/bty611},
  timestamp = {Wed, 16 Jan 2019 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/LuoYZBP19},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuYWP18,
  author    = {Yang Liu and
               Qing Ye and
               Liwei Wang and
               Jian Peng},
  title     = {Learning structural motif representations for efficient protein structure
               search},
  journal   = {Bioinformatics},
  volume    = {34},
  number    = {17},
  pages     = {i773--i780},
  year      = {2018},
  url       = {https://doi.org/10.1093/bioinformatics/bty585},
  doi       = {10.1093/bioinformatics/bty585},
  timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/LiuYWP18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/ShangJTXPH18,
  author    = {Jingbo Shang and
               Meng Jiang and
               Wenzhu Tong and
               Jinfeng Xiao and
               Jian Peng and
               Jiawei Han},
  title     = {DPPred: An Effective Prediction Framework with Concise Discriminative
               Patterns},
  journal   = {{IEEE} Trans. Knowl. Data Eng.},
  volume    = {30},
  number    = {7},
  pages     = {1226--1239},
  year      = {2018},
  url       = {https://doi.org/10.1109/TKDE.2017.2757476},
  doi       = {10.1109/TKDE.2017.2757476},
  timestamp = {Fri, 02 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/tkde/ShangJTXPH18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/LiuSRXG0018,
  author    = {Liyuan Liu and
               Jingbo Shang and
               Xiang Ren and
               Frank Fangzheng Xu and
               Huan Gui and
               Jian Peng and
               Jiawei Han},
  title     = {Empower Sequence Labeling with Task-Aware Neural Language Model},
  booktitle = {Proceedings of the Thirty-Second {AAAI} Conference on Artificial Intelligence,
               (AAAI-18), the 30th innovative Applications of Artificial Intelligence
               (IAAI-18), and the 8th {AAAI} Symposium on Educational Advances in
               Artificial Intelligence (EAAI-18), New Orleans, Louisiana, USA, February
               2-7, 2018},
  pages     = {5253--5260},
  year      = {2018},
  crossref  = {DBLP:conf/aaai/2018},
  url       = {https://www.aaai.org/ocs/index.php/AAAI/AAAI18/paper/view/17123},
  timestamp = {Tue, 23 Oct 2018 06:42:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/aaai/LiuSRXG0018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emnlp/LiuRSG0018,
  author    = {Liyuan Liu and
               Xiang Ren and
               Jingbo Shang and
               Xiaotao Gu and
               Jian Peng and
               Jiawei Han},
  title     = {Efficient Contextualized Representation: Language Model Pruning for
               Sequence Labeling},
  booktitle = {Proceedings of the 2018 Conference on Empirical Methods in Natural
               Language Processing, Brussels, Belgium, October 31 - November 4, 2018},
  pages     = {1215--1225},
  year      = {2018},
  crossref  = {DBLP:conf/emnlp/2018},
  url       = {https://aclanthology.info/papers/D18-1153/d18-1153},
  timestamp = {Sat, 27 Oct 2018 20:04:06 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/emnlp/LiuRSG0018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/LiuFMZ0018,
  author    = {Hao Liu and
               Yihao Feng and
               Yi Mao and
               Dengyong Zhou and
               Jian Peng and
               Qiang Liu},
  title     = {Action-dependent Control Variates for Policy Optimization via Stein
               Identity},
  booktitle = {6th International Conference on Learning Representations, {ICLR} 2018,
               Vancouver, BC, Canada, April 30 - May 3, 2018, Conference Track Proceedings},
  year      = {2018},
  crossref  = {DBLP:conf/iclr/2018},
  url       = {https://openreview.net/forum?id=H1mCp-ZRZ},
  timestamp = {Thu, 04 Apr 2019 13:20:09 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/LiuFMZ0018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/Yu0S018,
  author    = {Keyi Yu and
               Yang Liu and
               Alexander G. Schwing and
               Jian Peng},
  title     = {Fast and Accurate Text Classification: Skimming, Rereading and Early
               Stopping},
  booktitle = {6th International Conference on Learning Representations, {ICLR} 2018,
               Vancouver, BC, Canada, April 30 - May 3, 2018, Workshop Track Proceedings},
  year      = {2018},
  crossref  = {DBLP:conf/iclr/2018w},
  url       = {https://openreview.net/forum?id=r1wlAd1vM},
  timestamp = {Thu, 04 Apr 2019 13:20:09 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/Yu0S018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/XuLZP18,
  author    = {Tianbing Xu and
               Qiang Liu and
               Liang Zhao and
               Jian Peng},
  title     = {Learning to Explore via Meta-Policy Gradient},
  booktitle = {Proceedings of the 35th International Conference on Machine Learning,
               {ICML} 2018, Stockholmsm{\"{a}}ssan, Stockholm, Sweden, July
               10-15, 2018},
  pages     = {5459--5468},
  year      = {2018},
  crossref  = {DBLP:conf/icml/2018},
  url       = {http://proceedings.mlr.press/v80/xu18d.html},
  timestamp = {Wed, 03 Apr 2019 18:17:30 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/icml/XuLZP18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/GuanLLP18,
  author    = {Jiaqi Guan and
               Yang Liu and
               Qiang Liu and
               Jian Peng},
  title     = {Energy-efficient Amortized Inference with Cascaded Deep Classifiers},
  booktitle = {Proceedings of the Twenty-Seventh International Joint Conference on
               Artificial Intelligence, {IJCAI} 2018, July 13-19, 2018, Stockholm,
               Sweden.},
  pages     = {2184--2190},
  year      = {2018},
  crossref  = {DBLP:conf/ijcai/2018},
  url       = {https://doi.org/10.24963/ijcai.2018/302},
  doi       = {10.24963/ijcai.2018/302},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ijcai/GuanLLP18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/ChenPL18,
  author    = {Jinglin Chen and
               Jian Peng and
               Qiang Liu},
  title     = {Efficient Localized Inference for Large Graphical Models},
  booktitle = {Proceedings of the Twenty-Seventh International Joint Conference on
               Artificial Intelligence, {IJCAI} 2018, July 13-19, 2018, Stockholm,
               Sweden.},
  pages     = {4987--4993},
  year      = {2018},
  crossref  = {DBLP:conf/ijcai/2018},
  url       = {https://doi.org/10.24963/ijcai.2018/692},
  doi       = {10.24963/ijcai.2018/692},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ijcai/ChenPL18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/LuoWX018,
  author    = {Yunan Luo and
               Sheng Wang and
               Jinfeng Xiao and
               Jian Peng},
  title     = {Large-scale integration of heterogeneous pharmacogenomic data for
               identifying drug mechanism of action},
  booktitle = {Biocomputing 2018: Proceedings of the Pacific Symposium, The Big Island
               of Hawaii, Hawaii, USA, January 3-7, 2018},
  pages     = {44--55},
  year      = {2018},
  crossref  = {DBLP:conf/psb/2018},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb18/luo.pdf},
  timestamp = {Tue, 15 Jan 2019 17:21:04 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/psb/LuoWX018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/WangMYZHH0I18,
  author    = {Sheng Wang and
               Jianzhu Ma and
               Michael Ku Yu and
               Fan Zheng and
               Edward W. Huang and
               Jiawei Han and
               Jian Peng and
               Trey Ideker},
  title     = {Annotating gene sets by mining large literature collections with protein
               networks},
  booktitle = {Biocomputing 2018: Proceedings of the Pacific Symposium, The Big Island
               of Hawaii, Hawaii, USA, January 3-7, 2018},
  pages     = {601--613},
  year      = {2018},
  crossref  = {DBLP:conf/psb/2018},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb18/wang\_s.pdf},
  timestamp = {Wed, 16 Jan 2019 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/psb/WangMYZHH0I18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChoB018,
  author    = {Hyunghoon Cho and
               Bonnie Berger and
               Jian Peng},
  title     = {Generalizable Visualization of Mega-Scale Single-Cell Data},
  booktitle = {Research in Computational Molecular Biology - 22nd Annual International
               Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
  pages     = {251--253},
  year      = {2018},
  crossref  = {DBLP:conf/recomb/2018},
  url       = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-89929-9\%2F1.pdf},
  timestamp = {Tue, 04 Sep 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/ChoB018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LuoMLYIP18,
  author    = {Yunan Luo and
               Jianzhu Ma and
               Yang Liu and
               Qing Ye and
               Trey Ideker and
               Jian Peng},
  title     = {Deciphering Signaling Specificity with Deep Neural Networks},
  booktitle = {Research in Computational Molecular Biology - 22nd Annual International
               Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
  pages     = {266--268},
  year      = {2018},
  crossref  = {DBLP:conf/recomb/2018},
  url       = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-89929-9\%2F1.pdf},
  timestamp = {Tue, 18 Sep 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/LuoMLYIP18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1803-05044,
  author    = {Tianbing Xu and
               Qiang Liu and
               Liang Zhao and
               Jian Peng},
  title     = {Learning to Explore with Meta-Policy Gradient},
  journal   = {CoRR},
  volume    = {abs/1803.05044},
  year      = {2018},
  url       = {http://arxiv.org/abs/1803.05044},
  archivePrefix = {arXiv},
  eprint    = {1803.05044},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1803-05044},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1804-07827,
  author    = {Liyuan Liu and
               Xiang Ren and
               Jingbo Shang and
               Jian Peng and
               Jiawei Han},
  title     = {Efficient Contextualized Representation: Language Model Pruning for
               Sequence Labeling},
  journal   = {CoRR},
  volume    = {abs/1804.07827},
  year      = {2018},
  url       = {http://arxiv.org/abs/1804.07827},
  archivePrefix = {arXiv},
  eprint    = {1804.07827},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1804-07827},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1805-10309,
  author    = {Tanmay Gangwani and
               Qiang Liu and
               Jian Peng},
  title     = {Learning Self-Imitating Diverse Policies},
  journal   = {CoRR},
  volume    = {abs/1805.10309},
  year      = {2018},
  url       = {http://arxiv.org/abs/1805.10309},
  archivePrefix = {arXiv},
  eprint    = {1805.10309},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1805-10309},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1806-00437,
  author    = {Hyunghoon Cho and
               Benjamin Demeo and
               Jian Peng and
               Bonnie Berger},
  title     = {Large-Margin Classification in Hyperbolic Space},
  journal   = {CoRR},
  volume    = {abs/1806.00437},
  year      = {2018},
  url       = {http://arxiv.org/abs/1806.00437},
  archivePrefix = {arXiv},
  eprint    = {1806.00437},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1806-00437},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1808-00232,
  author    = {Yuan Xie and
               Boyi Liu and
               Qiang Liu and
               Zhaoran Wang and
               Yuan Zhou and
               Jian Peng},
  title     = {Off-Policy Evaluation and Learning from Logged Bandit Feedback: Error
               Reduction via Surrogate Policy},
  journal   = {CoRR},
  volume    = {abs/1808.00232},
  year      = {2018},
  url       = {http://arxiv.org/abs/1808.00232},
  archivePrefix = {arXiv},
  eprint    = {1808.00232},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1808-00232},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MaZSWPH17,
  author    = {Xiuli Ma and
               Guangyu Zhou and
               Jingbo Shang and
               Jingjing Wang and
               Jian Peng and
               Jiawei Han},
  title     = {Detection of Complexes in Biological Networks Through Diversified
               Dense Subgraph Mining},
  journal   = {Journal of Computational Biology},
  volume    = {24},
  number    = {9},
  pages     = {923--941},
  year      = {2017},
  url       = {https://doi.org/10.1089/cmb.2017.0037},
  doi       = {10.1089/cmb.2017.0037},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/MaZSWPH17},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/Wang017,
  author    = {Sheng Wang and
               Jian Peng},
  title     = {Network-assisted target identification for haploinsufficiency and
               homozygous profiling screens},
  journal   = {PLoS Computational Biology},
  volume    = {13},
  number    = {6},
  year      = {2017},
  url       = {https://doi.org/10.1371/journal.pcbi.1005553},
  doi       = {10.1371/journal.pcbi.1005553},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/ploscb/Wang017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/He0S017,
  author    = {Frank S. He and
               Yang Liu and
               Alexander G. Schwing and
               Jian Peng},
  title     = {Learning to Play in a Day: Faster Deep Reinforcement Learning by Optimality
               Tightening},
  booktitle = {5th International Conference on Learning Representations, {ICLR} 2017,
               Toulon, France, April 24-26, 2017, Conference Track Proceedings},
  year      = {2017},
  crossref  = {DBLP:conf/iclr/2017},
  url       = {https://openreview.net/forum?id=rJ8Je4clg},
  timestamp = {Thu, 04 Apr 2019 13:20:07 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/He0S017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/WangQ017,
  author    = {Sheng Wang and
               Meng Qu and
               Jian Peng},
  title     = {ProSNet: integrating homology with molecular networks for protein
               function prediction},
  booktitle = {Biocomputing 2017: Proceedings of the Pacific Symposium, Kohala Coast,
               Hawaii, USA, January 3-7, 2017},
  pages     = {27--38},
  year      = {2017},
  crossref  = {DBLP:conf/psb/2017},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb17/wang\_s.pdf},
  timestamp = {Sun, 07 May 2017 01:26:36 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/psb/WangQ017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uai/LiuRLP17,
  author    = {Yang Liu and
               Prajit Ramachandran and
               Qiang Liu and
               Jian Peng},
  title     = {Stein Variational Policy Gradient},
  booktitle = {Proceedings of the Thirty-Third Conference on Uncertainty in Artificial
               Intelligence, {UAI} 2017, Sydney, Australia, August 11-15, 2017},
  year      = {2017},
  crossref  = {DBLP:conf/uai/2017},
  url       = {http://auai.org/uai2017/proceedings/papers/239.pdf},
  timestamp = {Tue, 18 Sep 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/uai/LiuRLP17},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/LiuRLP17,
  author    = {Yang Liu and
               Prajit Ramachandran and
               Qiang Liu and
               Jian Peng},
  title     = {Stein Variational Policy Gradient},
  journal   = {CoRR},
  volume    = {abs/1704.02399},
  year      = {2017},
  url       = {http://arxiv.org/abs/1704.02399},
  archivePrefix = {arXiv},
  eprint    = {1704.02399},
  timestamp = {Tue, 18 Sep 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/LiuRLP17},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1709-04109,
  author    = {Liyuan Liu and
               Jingbo Shang and
               Frank F. Xu and
               Xiang Ren and
               Huan Gui and
               Jian Peng and
               Jiawei Han},
  title     = {Empower Sequence Labeling with Task-Aware Neural Language Model},
  journal   = {CoRR},
  volume    = {abs/1709.04109},
  year      = {2017},
  url       = {http://arxiv.org/abs/1709.04109},
  archivePrefix = {arXiv},
  eprint    = {1709.04109},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1709-04109},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1710-03368,
  author    = {Jiaqi Guan and
               Yang Liu and
               Qiang Liu and
               Jian Peng},
  title     = {Energy-efficient Amortized Inference with Cascaded Deep Classifiers},
  journal   = {CoRR},
  volume    = {abs/1710.03368},
  year      = {2017},
  url       = {http://arxiv.org/abs/1710.03368},
  archivePrefix = {arXiv},
  eprint    = {1710.03368},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1710-03368},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1710-10404,
  author    = {Jinglin Chen and
               Jian Peng and
               Qiang Liu},
  title     = {Efficient Localized Inference for Large Graphical Models},
  journal   = {CoRR},
  volume    = {abs/1710.10404},
  year      = {2017},
  url       = {http://arxiv.org/abs/1710.10404},
  archivePrefix = {arXiv},
  eprint    = {1710.10404},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1710-10404},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdataconf/ZhuZPZ16,
  author    = {Rongda Zhu and
               Aston Zhang and
               Jian Peng and
               Chengxiang Zhai},
  title     = {Exploiting temporal divergence of topic distributions for event detection},
  booktitle = {2016 {IEEE} International Conference on Big Data, BigData 2016, Washington
               DC, USA, December 5-8, 2016},
  pages     = {164--171},
  year      = {2016},
  crossref  = {DBLP:conf/bigdataconf/2016},
  url       = {https://doi.org/10.1109/BigData.2016.7840602},
  doi       = {10.1109/BigData.2016.7840602},
  timestamp = {Wed, 20 Feb 2019 16:54:32 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bigdataconf/ZhuZPZ16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LuoZB016,
  author    = {Yunan Luo and
               Jianyang Zeng and
               Bonnie Berger and
               Jian Peng},
  title     = {Low-Density Locality-Sensitive Hashing Boosts Metagenomic Binning},
  booktitle = {Research in Computational Molecular Biology - 20th Annual Conference,
               {RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
  pages     = {255--257},
  year      = {2016},
  crossref  = {DBLP:conf/recomb/2016},
  url       = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-31957-5\%2F1.pdf},
  timestamp = {Tue, 22 Jan 2019 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/LuoZB016},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MaZW0016,
  author    = {Xiuli Ma and
               Guangyu Zhou and
               Jingjing Wang and
               Jian Peng and
               Jiawei Han},
  title     = {Complexes Detection in Biological Networks via Diversified Dense Subgraphs
               Mining},
  booktitle = {Research in Computational Molecular Biology - 20th Annual Conference,
               {RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
  pages     = {270--272},
  year      = {2016},
  crossref  = {DBLP:conf/recomb/2016},
  url       = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-31957-5\%2F1.pdf},
  timestamp = {Tue, 22 Jan 2019 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/MaZW0016},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/ShangPH16,
  author    = {Jingbo Shang and
               Jian Peng and
               Jiawei Han},
  title     = {{MACFP:} Maximal Approximate Consecutive Frequent Pattern Mining under
               Edit Distance},
  booktitle = {Proceedings of the 2016 {SIAM} International Conference on Data Mining,
               Miami, Florida, USA, May 5-7, 2016},
  pages     = {558--566},
  year      = {2016},
  crossref  = {DBLP:conf/sdm/2016},
  url       = {https://doi.org/10.1137/1.9781611974348.63},
  doi       = {10.1137/1.9781611974348.63},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/sdm/ShangPH16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/ShangTPH16,
  author    = {Jingbo Shang and
               Wenzhu Tong and
               Jian Peng and
               Jiawei Han},
  title     = {DPClass: An Effective but Concise Discriminative Patterns-Based Classification
               Framework},
  booktitle = {Proceedings of the 2016 {SIAM} International Conference on Data Mining,
               Miami, Florida, USA, May 5-7, 2016},
  pages     = {567--575},
  year      = {2016},
  crossref  = {DBLP:conf/sdm/2016},
  url       = {https://doi.org/10.1137/1.9781611974348.64},
  doi       = {10.1137/1.9781611974348.64},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/sdm/ShangTPH16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/MaZWPH16,
  author    = {Xiuli Ma and
               Guangyu Zhou and
               Jingjing Wang and
               Jian Peng and
               Jiawei Han},
  title     = {Complexes Detection in Biological Networks via Diversified Dense Subgraphs
               Mining},
  journal   = {CoRR},
  volume    = {abs/1604.03244},
  year      = {2016},
  url       = {http://arxiv.org/abs/1604.03244},
  archivePrefix = {arXiv},
  eprint    = {1604.03244},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/MaZWPH16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ShangQLKHP16,
  author    = {Jingbo Shang and
               Meng Qu and
               Jialu Liu and
               Lance M. Kaplan and
               Jiawei Han and
               Jian Peng},
  title     = {Meta-Path Guided Embedding for Similarity Search in Large-Scale Heterogeneous
               Information Networks},
  journal   = {CoRR},
  volume    = {abs/1610.09769},
  year      = {2016},
  url       = {http://arxiv.org/abs/1610.09769},
  archivePrefix = {arXiv},
  eprint    = {1610.09769},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/ShangQLKHP16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ShangJTXPH16,
  author    = {Jingbo Shang and
               Meng Jiang and
               Wenzhu Tong and
               Jinfeng Xiao and
               Jian Peng and
               Jiawei Han},
  title     = {DPPred: An Effective Prediction Framework with Concise Discriminative
               Patterns},
  journal   = {CoRR},
  volume    = {abs/1610.09778},
  year      = {2016},
  url       = {http://arxiv.org/abs/1610.09778},
  archivePrefix = {arXiv},
  eprint    = {1610.09778},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/ShangJTXPH16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/HeLSP16,
  author    = {Frank S. He and
               Yang Liu and
               Alexander G. Schwing and
               Jian Peng},
  title     = {Learning to Play in a Day: Faster Deep Reinforcement Learning by Optimality
               Tightening},
  journal   = {CoRR},
  volume    = {abs/1611.01606},
  year      = {2016},
  url       = {http://arxiv.org/abs/1611.01606},
  archivePrefix = {arXiv},
  eprint    = {1611.01606},
  timestamp = {Tue, 18 Sep 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/HeLSP16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangCZB015,
  author    = {Sheng Wang and
               Hyunghoon Cho and
               ChengXiang Zhai and
               Bonnie Berger and
               Jian Peng},
  title     = {Exploiting ontology graph for predicting sparsely annotated gene function},
  journal   = {Bioinformatics},
  volume    = {31},
  number    = {12},
  pages     = {357--364},
  year      = {2015},
  url       = {https://doi.org/10.1093/bioinformatics/btv260},
  doi       = {10.1093/bioinformatics/btv260},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/WangCZB015},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Simmons0BB15,
  author    = {Sean Simmons and
               Jian Peng and
               Jadwiga R. Bienkowska and
               Bonnie Berger},
  title     = {Discovering What Dimensionality Reduction Really Tells Us About RNA-Seq
               Data},
  journal   = {Journal of Computational Biology},
  volume    = {22},
  number    = {8},
  pages     = {715--728},
  year      = {2015},
  url       = {https://doi.org/10.1089/cmb.2015.0085},
  doi       = {10.1089/cmb.2015.0085},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/Simmons0BB15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TangW0MX15,
  author    = {Qingming Tang and
               Sheng Wang and
               Jian Peng and
               Jianzhu Ma and
               Jinbo Xu},
  title     = {Bermuda: de novo assembly of transcripts with new insights for handling
               uneven coverage},
  booktitle = {Proceedings of the 6th {ACM} Conference on Bioinformatics, Computational
               Biology and Health Informatics, {BCB} 2015, Atlanta, GA, USA, September
               9-12, 2015},
  pages     = {166--175},
  year      = {2015},
  crossref  = {DBLP:conf/bcb/2015},
  url       = {https://doi.org/10.1145/2808719.2808736},
  doi       = {10.1145/2808719.2808736},
  timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bcb/TangW0MX15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/TangY0X15,
  author    = {Qingming Tang and
               Chao Yang and
               Jian Peng and
               Jinbo Xu},
  title     = {Exact Hybrid Covariance Thresholding for Joint Graphical Lasso},
  booktitle = {Machine Learning and Knowledge Discovery in Databases - European Conference,
               {ECML} {PKDD} 2015, Porto, Portugal, September 7-11, 2015, Proceedings,
               Part {II}},
  pages     = {593--607},
  year      = {2015},
  crossref  = {DBLP:conf/pkdd/2015-2},
  url       = {https://doi.org/10.1007/978-3-319-23525-7\_36},
  doi       = {10.1007/978-3-319-23525-7\_36},
  timestamp = {Wed, 14 Nov 2018 10:56:29 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/pkdd/TangY0X15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChoBP15,
  author    = {Hyunghoon Cho and
               Bonnie Berger and
               Jian Peng},
  title     = {Diffusion Component Analysis: Unraveling Functional Topology in Biological
               Networks},
  booktitle = {Research in Computational Molecular Biology - 19th Annual International
               Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
  pages     = {62--64},
  year      = {2015},
  crossref  = {DBLP:conf/recomb/2015},
  url       = {https://doi.org/10.1007/978-3-319-16706-0\_9},
  doi       = {10.1007/978-3-319-16706-0\_9},
  timestamp = {Thu, 25 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/ChoBP15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/TangY0X15,
  author    = {Qingming Tang and
               Chao Yang and
               Jian Peng and
               Jinbo Xu},
  title     = {Exact Hybrid Covariance Thresholding for Joint Graphical Lasso},
  journal   = {CoRR},
  volume    = {abs/1503.02128},
  year      = {2015},
  url       = {http://arxiv.org/abs/1503.02128},
  archivePrefix = {arXiv},
  eprint    = {1503.02128},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/TangY0X15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ChoBP15,
  author    = {Hyunghoon Cho and
               Bonnie Berger and
               Jian Peng},
  title     = {Diffusion Component Analysis: Unraveling Functional Topology in Biological
               Networks},
  journal   = {CoRR},
  volume    = {abs/1504.02719},
  year      = {2015},
  url       = {http://arxiv.org/abs/1504.02719},
  archivePrefix = {arXiv},
  eprint    = {1504.02719},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/ChoBP15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/Wang0MX15,
  author    = {Sheng Wang and
               Jian Peng and
               Jianzhu Ma and
               Jinbo Xu},
  title     = {Protein secondary structure prediction using deep convolutional neural
               fields},
  journal   = {CoRR},
  volume    = {abs/1512.00843},
  year      = {2015},
  url       = {http://arxiv.org/abs/1512.00843},
  archivePrefix = {arXiv},
  eprint    = {1512.00843},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/Wang0MX15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BergerYPB14,
  author    = {Emily Berger and
               Deniz Y{\"{o}}r{\"{u}}koglu and
               Jian Peng and
               Bonnie Berger},
  title     = {HapTree: {A} Novel Bayesian Framework for Single Individual Polyplotyping
               Using {NGS} Data},
  journal   = {PLoS Computational Biology},
  volume    = {10},
  number    = {3},
  year      = {2014},
  url       = {https://doi.org/10.1371/journal.pcbi.1003502},
  doi       = {10.1371/journal.pcbi.1003502},
  timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/ploscb/BergerYPB14},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BergerYPB14,
  author    = {Emily Berger and
               Deniz Y{\"{o}}r{\"{u}}koglu and
               Jian Peng and
               Bonnie Berger},
  title     = {HapTree: {A} Novel Bayesian Framework for Single Individual Polyplotyping
               Using {NGS} Data},
  booktitle = {Research in Computational Molecular Biology - 18th Annual International
               Conference, {RECOMB} 2014, Pittsburgh, PA, USA, April 2-5, 2014, Proceedings},
  pages     = {18--19},
  year      = {2014},
  crossref  = {DBLP:conf/recomb/2014},
  url       = {https://doi.org/10.1007/978-3-319-05269-4\_2},
  doi       = {10.1007/978-3-319-05269-4\_2},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/BergerYPB14},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DanielsGPCBB13,
  author    = {Noah M. Daniels and
               Andrew Gallant and
               Jian Peng and
               Lenore J. Cowen and
               Michael Baym and
               Bonnie Berger},
  title     = {Compressive genomics for protein databases},
  journal   = {Bioinformatics},
  volume    = {29},
  number    = {13},
  pages     = {283--290},
  year      = {2013},
  url       = {https://doi.org/10.1093/bioinformatics/btt214},
  doi       = {10.1093/bioinformatics/btt214},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/DanielsGPCBB13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aistats/Ma0WX13,
  author    = {Jianzhu Ma and
               Jian Peng and
               Sheng Wang and
               Jinbo Xu},
  title     = {Estimating the Partition Function of Graphical Models Using Langevin
               Importance Sampling},
  booktitle = {Proceedings of the Sixteenth International Conference on Artificial
               Intelligence and Statistics, {AISTATS} 2013, Scottsdale, AZ, USA,
               April 29 - May 1, 2013},
  pages     = {433--441},
  year      = {2013},
  crossref  = {DBLP:conf/aistats/2013},
  url       = {http://jmlr.org/proceedings/papers/v31/ma13a.html},
  timestamp = {Wed, 03 Apr 2019 18:01:56 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/aistats/Ma0WX13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MaPWX12,
  author    = {Jianzhu Ma and
               Jian Peng and
               Sheng Wang and
               Jinbo Xu},
  title     = {A conditional neural fields model for protein threading},
  journal   = {Bioinformatics},
  volume    = {28},
  number    = {12},
  pages     = {59--66},
  year      = {2012},
  url       = {https://doi.org/10.1093/bioinformatics/bts213},
  doi       = {10.1093/bioinformatics/bts213},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/MaPWX12},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/uai/HazanPS12,
  author    = {Tamir Hazan and
               Jian Peng and
               Amnon Shashua},
  title     = {Tightening Fractional Covering Upper Bounds on the Partition Function
               for High-Order Region Graphs},
  booktitle = {Proceedings of the Twenty-Eighth Conference on Uncertainty in Artificial
               Intelligence, Catalina Island, CA, USA, August 14-18, 2012},
  pages     = {356--366},
  year      = {2012},
  crossref  = {DBLP:conf/uai/2012},
  url       = {https://dslpitt.org/uai/displayArticleDetails.jsp?mmnu=1\&\#38;smnu=2\&\#38;article\_id=2298\&\#38;proceeding\_id=28},
  timestamp = {Wed, 29 Mar 2017 16:45:26 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/uai/HazanPS12},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/jmlr/PengHSX12,
  author    = {Jian Peng and
               Tamir Hazan and
               Nathan Srebro and
               Jinbo Xu},
  title     = {Approximate Inference by Intersecting Semidefinite Bound and Local
               Polytope},
  booktitle = {Proceedings of the Fifteenth International Conference on Artificial
               Intelligence and Statistics, {AISTATS} 2012, La Palma, Canary Islands,
               Spain, April 21-23, 2012},
  pages     = {868--876},
  year      = {2012},
  crossref  = {DBLP:conf/aistats/2012},
  url       = {http://jmlr.org/proceedings/papers/v22/peng12.html},
  timestamp = {Wed, 03 Apr 2019 18:01:57 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/jmlr/PengHSX12},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1210-4881,
  author    = {Tamir Hazan and
               Jian Peng and
               Amnon Shashua},
  title     = {Tightening Fractional Covering Upper Bounds on the Partition Function
               for High-Order Region Graphs},
  journal   = {CoRR},
  volume    = {abs/1210.4881},
  year      = {2012},
  url       = {http://arxiv.org/abs/1210.4881},
  archivePrefix = {arXiv},
  eprint    = {1210.4881},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1210-4881},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangPX11,
  author    = {Sheng Wang and
               Jian Peng and
               Jinbo Xu},
  title     = {Alignment of distantly related protein structures: algorithm, bound
               and implications to homology modeling},
  journal   = {Bioinformatics},
  volume    = {27},
  number    = {18},
  pages     = {2537--2545},
  year      = {2011},
  url       = {https://doi.org/10.1093/bioinformatics/btr432},
  doi       = {10.1093/bioinformatics/btr432},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/WangPX11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/PengHMU11,
  author    = {Jian Peng and
               Tamir Hazan and
               David A. McAllester and
               Raquel Urtasun},
  title     = {Convex Max-Product over Compact Sets for Protein Folding},
  booktitle = {Proceedings of the 28th International Conference on Machine Learning,
               {ICML} 2011, Bellevue, Washington, USA, June 28 - July 2, 2011},
  pages     = {729--736},
  year      = {2011},
  crossref  = {DBLP:conf/icml/2011},
  url       = {https://icml.cc/2011/papers/413\_icmlpaper.pdf},
  timestamp = {Wed, 03 Apr 2019 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/icml/PengHMU11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PengX10,
  author    = {Jian Peng and
               Jinbo Xu},
  title     = {Low-homology protein threading},
  journal   = {Bioinformatics {[ISMB]}},
  volume    = {26},
  number    = {12},
  pages     = {294--300},
  year      = {2010},
  url       = {https://doi.org/10.1093/bioinformatics/btq192},
  doi       = {10.1093/bioinformatics/btq192},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/PengX10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ZhaoPX10,
  author    = {Feng Zhao and
               Jian Peng and
               Jinbo Xu},
  title     = {Fragment-free approach to protein folding using conditional neural
               fields},
  journal   = {Bioinformatics {[ISMB]}},
  volume    = {26},
  number    = {12},
  pages     = {310--317},
  year      = {2010},
  url       = {https://doi.org/10.1093/bioinformatics/btq193},
  doi       = {10.1093/bioinformatics/btq193},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/ZhaoPX10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ZhaoPDFSX10,
  author    = {Feng Zhao and
               Jian Peng and
               Joe DeBartolo and
               Karl F. Freed and
               Tobin R. Sosnick and
               Jinbo Xu},
  title     = {A Probabilistic and Continuous Model of Protein Conformational Space
               for Template-Free Modeling},
  journal   = {Journal of Computational Biology},
  volume    = {17},
  number    = {6},
  pages     = {783--798},
  year      = {2010},
  url       = {https://doi.org/10.1089/cmb.2009.0235},
  doi       = {10.1089/cmb.2009.0235},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/ZhaoPDFSX10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/WangZPX10,
  author    = {Zhiyong Wang and
               Feng Zhao and
               Jian Peng and
               Jinbo Xu},
  title     = {Protein 8-class secondary structure prediction using Conditional Neural
               Fields},
  booktitle = {2010 {IEEE} International Conference on Bioinformatics and Biomedicine,
               {BIBM} 2010, Hong Kong, China, December 18-21, 2010, Proceedings},
  pages     = {109--114},
  year      = {2010},
  crossref  = {DBLP:conf/bibm/2010},
  url       = {https://doi.org/10.1109/BIBM.2010.5706547},
  doi       = {10.1109/BIBM.2010.5706547},
  timestamp = {Tue, 05 Feb 2019 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bibm/WangZPX10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/PengBX09,
  author    = {Jian Peng and
               Liefeng Bo and
               Jinbo Xu},
  title     = {Conditional Neural Fields},
  booktitle = {Advances in Neural Information Processing Systems 22: 23rd Annual
               Conference on Neural Information Processing Systems 2009. Proceedings
               of a meeting held 7-10 December 2009, Vancouver, British Columbia,
               Canada.},
  pages     = {1419--1427},
  year      = {2009},
  crossref  = {DBLP:conf/nips/2009},
  url       = {http://papers.nips.cc/paper/3869-conditional-neural-fields},
  timestamp = {Thu, 11 Dec 2014 17:34:07 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/nips/PengBX09},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PengX09,
  author    = {Jian Peng and
               Jinbo Xu},
  title     = {Boosting Protein Threading Accuracy},
  booktitle = {Research in Computational Molecular Biology, 13th Annual International
               Conference, {RECOMB} 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings},
  pages     = {31--45},
  year      = {2009},
  crossref  = {DBLP:conf/recomb/2009},
  url       = {https://doi.org/10.1007/978-3-642-02008-7\_3},
  doi       = {10.1007/978-3-642-02008-7\_3},
  timestamp = {Thu, 25 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/PengX09},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ZhaoPDFSX09,
  author    = {Feng Zhao and
               Jian Peng and
               Joe DeBartolo and
               Karl F. Freed and
               Tobin R. Sosnick and
               Jinbo Xu},
  title     = {A Probabilistic Graphical Model for Ab Initio Folding},
  booktitle = {Research in Computational Molecular Biology, 13th Annual International
               Conference, {RECOMB} 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings},
  pages     = {59--73},
  year      = {2009},
  crossref  = {DBLP:conf/recomb/2009},
  url       = {https://doi.org/10.1007/978-3-642-02008-7\_5},
  doi       = {10.1007/978-3-642-02008-7\_5},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/ZhaoPDFSX09},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/aaai/2018,
  editor    = {Sheila A. McIlraith and
               Kilian Q. Weinberger},
  title     = {Proceedings of the Thirty-Second {AAAI} Conference on Artificial Intelligence,
               (AAAI-18), the 30th innovative Applications of Artificial Intelligence
               (IAAI-18), and the 8th {AAAI} Symposium on Educational Advances in
               Artificial Intelligence (EAAI-18), New Orleans, Louisiana, USA, February
               2-7, 2018},
  publisher = {{AAAI} Press},
  year      = {2018},
  url       = {https://www.aaai.org/ocs/index.php/AAAI/AAAI18/schedConf/presentations},
  timestamp = {Tue, 23 Oct 2018 06:42:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/aaai/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/emnlp/2018,
  editor    = {Ellen Riloff and
               David Chiang and
               Julia Hockenmaier and
               Jun'ichi Tsujii},
  title     = {Proceedings of the 2018 Conference on Empirical Methods in Natural
               Language Processing, Brussels, Belgium, October 31 - November 4, 2018},
  publisher = {Association for Computational Linguistics},
  year      = {2018},
  url       = {https://aclanthology.info/volumes/proceedings-of-the-2018-conference-on-empirical-methods-in-natural-language-processing},
  isbn      = {978-1-948087-84-1},
  timestamp = {Sat, 27 Oct 2018 20:04:06 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/emnlp/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iclr/2018,
  title     = {6th International Conference on Learning Representations, {ICLR} 2018,
               Vancouver, BC, Canada, April 30 - May 3, 2018, Conference Track Proceedings},
  publisher = {OpenReview.net},
  year      = {2018},
  url       = {https://openreview.net/group?id=ICLR.cc/2018/Conference},
  timestamp = {Thu, 04 Apr 2019 13:20:09 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iclr/2018w,
  title     = {6th International Conference on Learning Representations, {ICLR} 2018,
               Vancouver, BC, Canada, April 30 - May 3, 2018, Workshop Track Proceedings},
  publisher = {OpenReview.net},
  year      = {2018},
  url       = {https://openreview.net/group?id=ICLR.cc/2018/Workshop},
  timestamp = {Thu, 04 Apr 2019 13:20:09 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/2018w},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icml/2018,
  editor    = {Jennifer G. Dy and
               Andreas Krause},
  title     = {Proceedings of the 35th International Conference on Machine Learning,
               {ICML} 2018, Stockholmsm{\"{a}}ssan, Stockholm, Sweden, July
               10-15, 2018},
  series    = {Proceedings of Machine Learning Research},
  volume    = {80},
  publisher = {{PMLR}},
  year      = {2018},
  url       = {http://proceedings.mlr.press/v80/},
  timestamp = {Wed, 03 Apr 2019 18:17:30 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/icml/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ijcai/2018,
  editor    = {J{\'{e}}r{\^{o}}me Lang},
  title     = {Proceedings of the Twenty-Seventh International Joint Conference on
               Artificial Intelligence, {IJCAI} 2018, July 13-19, 2018, Stockholm,
               Sweden},
  publisher = {ijcai.org},
  year      = {2018},
  url       = {http://www.ijcai.org/proceedings/2018/},
  isbn      = {978-0-9992411-2-7},
  timestamp = {Sat, 28 Jul 2018 14:39:21 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ijcai/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/psb/2018,
  editor    = {Russ B. Altman and
               A. Keith Dunker and
               Lawrence Hunter and
               Marylyn D. Ritchie and
               Teri E. Klein},
  title     = {Biocomputing 2018: Proceedings of the Pacific Symposium, The Big Island
               of Hawaii, Hawaii, USA, January 3-7, 2018},
  year      = {2018},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb18/},
  timestamp = {Tue, 15 Jan 2019 17:21:04 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/psb/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2018,
  editor    = {Benjamin J. Raphael},
  title     = {Research in Computational Molecular Biology - 22nd Annual International
               Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {10812},
  publisher = {Springer},
  year      = {2018},
  url       = {https://doi.org/10.1007/978-3-319-89929-9},
  doi       = {10.1007/978-3-319-89929-9},
  isbn      = {978-3-319-89928-2},
  timestamp = {Thu, 19 Apr 2018 13:47:19 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iclr/2017,
  title     = {5th International Conference on Learning Representations, {ICLR} 2017,
               Toulon, France, April 24-26, 2017, Conference Track Proceedings},
  publisher = {OpenReview.net},
  year      = {2017},
  url       = {https://openreview.net/group?id=ICLR.cc/2017/conference},
  timestamp = {Thu, 04 Apr 2019 13:20:07 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iclr/2017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/psb/2017,
  editor    = {Russ B. Altman and
               A. Keith Dunker and
               Lawrence Hunter and
               Marylyn D. Ritchie and
               Teri E. Klein},
  title     = {Biocomputing 2017: Proceedings of the Pacific Symposium, Kohala Coast,
               Hawaii, USA, January 3-7, 2017},
  year      = {2017},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb17/},
  timestamp = {Sun, 07 May 2017 01:26:36 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/psb/2017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/uai/2017,
  editor    = {Gal Elidan and
               Kristian Kersting and
               Alexander T. Ihler},
  title     = {Proceedings of the Thirty-Third Conference on Uncertainty in Artificial
               Intelligence, {UAI} 2017, Sydney, Australia, August 11-15, 2017},
  publisher = {{AUAI} Press},
  year      = {2017},
  url       = {http://www.auai.org/uai2017/media/Booklet.pdf},
  timestamp = {Mon, 13 Nov 2017 19:56:58 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/uai/2017},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bigdataconf/2016,
  editor    = {James Joshi and
               George Karypis and
               Ling Liu and
               Xiaohua Hu and
               Ronay Ak and
               Yinglong Xia and
               Weijia Xu and
               Aki{-}Hiro Sato and
               Sudarsan Rachuri and
               Lyle H. Ungar and
               Philip S. Yu and
               Rama Govindaraju and
               Toyotaro Suzumura},
  title     = {2016 {IEEE} International Conference on Big Data, BigData 2016, Washington
               DC, USA, December 5-8, 2016},
  publisher = {{IEEE} Computer Society},
  year      = {2016},
  url       = {http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=7818133},
  isbn      = {978-1-4673-9005-7},
  timestamp = {Wed, 20 Feb 2019 16:54:32 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bigdataconf/2016},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2016,
  editor    = {Mona Singh},
  title     = {Research in Computational Molecular Biology - 20th Annual Conference,
               {RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {9649},
  publisher = {Springer},
  year      = {2016},
  url       = {https://doi.org/10.1007/978-3-319-31957-5},
  doi       = {10.1007/978-3-319-31957-5},
  isbn      = {978-3-319-31956-8},
  timestamp = {Tue, 30 Oct 2018 10:59:45 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2016},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/sdm/2016,
  editor    = {Sanjay Chawla Venkatasubramanian and
               Wagner Meira Jr.},
  title     = {Proceedings of the 2016 {SIAM} International Conference on Data Mining,
               Miami, Florida, USA, May 5-7, 2016},
  publisher = {{SIAM}},
  year      = {2016},
  url       = {https://doi.org/10.1137/1.9781611974348},
  doi       = {10.1137/1.9781611974348},
  isbn      = {978-1-61197-434-8},
  timestamp = {Wed, 17 May 2017 14:24:53 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/sdm/2016},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2015,
  title     = {Proceedings of the 6th {ACM} Conference on Bioinformatics, Computational
               Biology and Health Informatics, {BCB} 2015, Atlanta, GA, USA, September
               9-12, 2015},
  publisher = {{ACM}},
  year      = {2015},
  url       = {http://dl.acm.org/citation.cfm?id=2808719},
  isbn      = {978-1-4503-3853-0},
  timestamp = {Wed, 14 Oct 2015 10:04:36 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/bcb/2015},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/pkdd/2015-2,
  editor    = {Annalisa Appice and
               Pedro Pereira Rodrigues and
               V{\'{\i}}tor Santos Costa and
               Jo{\~{a}}o Gama and
               Al{\'{\i}}pio Jorge and
               Carlos Soares},
  title     = {Machine Learning and Knowledge Discovery in Databases - European Conference,
               {ECML} {PKDD} 2015, Porto, Portugal, September 7-11, 2015, Proceedings,
               Part {II}},
  series    = {Lecture Notes in Computer Science},
  volume    = {9285},
  publisher = {Springer},
  year      = {2015},
  url       = {https://doi.org/10.1007/978-3-319-23525-7},
  doi       = {10.1007/978-3-319-23525-7},
  isbn      = {978-3-319-23524-0},
  timestamp = {Wed, 14 Nov 2018 10:56:29 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/pkdd/2015-2},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2015,
  editor    = {Teresa M. Przytycka},
  title     = {Research in Computational Molecular Biology - 19th Annual International
               Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {9029},
  publisher = {Springer},
  year      = {2015},
  url       = {https://doi.org/10.1007/978-3-319-16706-0},
  doi       = {10.1007/978-3-319-16706-0},
  isbn      = {978-3-319-16705-3},
  timestamp = {Thu, 25 May 2017 00:42:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2015},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2014,
  editor    = {Roded Sharan},
  title     = {Research in Computational Molecular Biology - 18th Annual International
               Conference, {RECOMB} 2014, Pittsburgh, PA, USA, April 2-5, 2014, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {8394},
  publisher = {Springer},
  year      = {2014},
  url       = {https://doi.org/10.1007/978-3-319-05269-4},
  doi       = {10.1007/978-3-319-05269-4},
  isbn      = {978-3-319-05268-7},
  timestamp = {Thu, 25 May 2017 00:42:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2014},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/aistats/2013,
  title     = {Proceedings of the Sixteenth International Conference on Artificial
               Intelligence and Statistics, {AISTATS} 2013, Scottsdale, AZ, USA,
               April 29 - May 1, 2013},
  series    = {{JMLR} Workshop and Conference Proceedings},
  volume    = {31},
  publisher = {JMLR.org},
  year      = {2013},
  url       = {http://jmlr.org/proceedings/papers/v31/},
  timestamp = {Wed, 03 Apr 2019 18:01:56 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/aistats/2013},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/uai/2012,
  editor    = {Nando de Freitas and
               Kevin P. Murphy},
  title     = {Proceedings of the Twenty-Eighth Conference on Uncertainty in Artificial
               Intelligence, Catalina Island, CA, USA, August 14-18, 2012},
  publisher = {{AUAI} Press},
  year      = {2012},
  url       = {https://dslpitt.org/uai/displayArticles.jsp?mmnu=1\&smnu=1\&proceeding\_id=28},
  timestamp = {Wed, 29 Mar 2017 16:45:26 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/uai/2012},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/aistats/2012,
  editor    = {Neil D. Lawrence and
               Mark A. Girolami},
  title     = {Proceedings of the Fifteenth International Conference on Artificial
               Intelligence and Statistics, {AISTATS} 2012, La Palma, Canary Islands,
               Spain, April 21-23, 2012},
  series    = {{JMLR} Proceedings},
  volume    = {22},
  publisher = {JMLR.org},
  year      = {2012},
  url       = {http://jmlr.org/proceedings/papers/v22/},
  timestamp = {Wed, 03 Apr 2019 18:01:57 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/aistats/2012},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icml/2011,
  editor    = {Lise Getoor and
               Tobias Scheffer},
  title     = {Proceedings of the 28th International Conference on Machine Learning,
               {ICML} 2011, Bellevue, Washington, USA, June 28 - July 2, 2011},
  publisher = {Omnipress},
  year      = {2011},
  timestamp = {Wed, 29 Mar 2017 16:45:25 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/icml/2011},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bibm/2010,
  editor    = {Taesung Park and
               Stephen Kwok{-}Wing Tsui and
               Luonan Chen and
               Michael K. Ng and
               Limsoon Wong and
               Xiaohua Hu},
  title     = {2010 {IEEE} International Conference on Bioinformatics and Biomedicine,
               {BIBM} 2010, Hong Kong, China, December 18-21, 2010, Proceedings},
  publisher = {{IEEE} Computer Society},
  year      = {2010},
  url       = {http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=5695142},
  isbn      = {978-1-4244-8306-8},
  timestamp = {Thu, 07 Jan 2016 11:18:08 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bibm/2010},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/nips/2009,
  editor    = {Yoshua Bengio and
               Dale Schuurmans and
               John D. Lafferty and
               Christopher K. I. Williams and
               Aron Culotta},
  title     = {Advances in Neural Information Processing Systems 22: 23rd Annual
               Conference on Neural Information Processing Systems 2009. Proceedings
               of a meeting held 7-10 December 2009, Vancouver, British Columbia,
               Canada},
  publisher = {Curran Associates, Inc.},
  year      = {2009},
  url       = {http://papers.nips.cc/book/advances-in-neural-information-processing-systems-22-2009},
  isbn      = {9781615679119},
  timestamp = {Thu, 11 Dec 2014 17:34:07 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/nips/2009},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2009,
  editor    = {Serafim Batzoglou},
  title     = {Research in Computational Molecular Biology, 13th Annual International
               Conference, {RECOMB} 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {5541},
  publisher = {Springer},
  year      = {2009},
  url       = {https://doi.org/10.1007/978-3-642-02008-7},
  doi       = {10.1007/978-3-642-02008-7},
  isbn      = {978-3-642-02007-0},
  timestamp = {Thu, 25 May 2017 00:42:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2009},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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