BibTeX records: Itsik Pe'er

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@inproceedings{DBLP:conf/recomb/JosephP18,
  author    = {Tyler A. Joseph and
               Itsik Pe'er},
  title     = {Inference of Population Structure from Ancient {DNA}},
  booktitle = {Research in Computational Molecular Biology - 22nd Annual International
               Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
  pages     = {90--104},
  year      = {2018},
  crossref  = {DBLP:conf/recomb/2018},
  url       = {https://doi.org/10.1007/978-3-319-89929-9\_6},
  doi       = {10.1007/978-3-319-89929-9\_6},
  timestamp = {Sat, 05 May 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/JosephP18},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1811-07143,
  author    = {Iddo Drori and
               Isht Dwivedi and
               Pranav Shrestha and
               Jeffrey Wan and
               Yueqi Wang and
               Yunchu He and
               Anthony Mazza and
               Hugh Krogh{-}Freeman and
               Dimitri Leggas and
               Kendal Sandridge and
               Linyong Nan and
               Kaveri A. Thakoor and
               Chinmay Joshi and
               Sonam Goenka and
               Chen Keasar and
               Itsik Pe'er},
  title     = {High Quality Prediction of Protein {Q8} Secondary Structure by Diverse
               Neural Network Architectures},
  journal   = {CoRR},
  volume    = {abs/1811.07143},
  year      = {2018},
  url       = {http://arxiv.org/abs/1811.07143},
  archivePrefix = {arXiv},
  eprint    = {1811.07143},
  timestamp = {Sun, 25 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1811-07143},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1711-04078,
  author    = {Avinash Bukkittu and
               Baihan Lin and
               Trung Vu and
               Itsik Pe'er},
  title     = {Parkinson's Disease Digital Biomarker Discovery with Optimized Transitions
               and Inferred Markov Emissions},
  journal   = {CoRR},
  volume    = {abs/1711.04078},
  year      = {2017},
  url       = {http://arxiv.org/abs/1711.04078},
  archivePrefix = {arXiv},
  eprint    = {1711.04078},
  timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/corr/abs-1711-04078},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/YangCP16,
  author    = {Shuo Yang and
               Shai Carmi and
               Itsik Pe'er},
  title     = {Rapidly Registering Identity-by-Descent Across Ancestral Recombination
               Graphs},
  journal   = {Journal of Computational Biology},
  volume    = {23},
  number    = {6},
  pages     = {495--507},
  year      = {2016},
  url       = {https://doi.org/10.1089/cmb.2016.0016},
  doi       = {10.1089/cmb.2016.0016},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/YangCP16},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/YangCP15,
  author    = {Shuo Yang and
               Shai Carmi and
               Itsik Pe'er},
  title     = {Rapidly Registering Identity-by-Descent Across Ancestral Recombination
               Graphs},
  booktitle = {Research in Computational Molecular Biology - 19th Annual International
               Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
  pages     = {340--353},
  year      = {2015},
  crossref  = {DBLP:conf/recomb/2015},
  url       = {https://doi.org/10.1007/978-3-319-16706-0\_35},
  doi       = {10.1007/978-3-319-16706-0\_35},
  timestamp = {Mon, 05 Jun 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/YangCP15},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PalamaraP13,
  author    = {Pier Francesco Palamara and
               Itsik Pe'er},
  title     = {Inference of historical migration rates via haplotype sharing},
  journal   = {Bioinformatics},
  volume    = {29},
  number    = {13},
  pages     = {180--188},
  year      = {2013},
  url       = {https://doi.org/10.1093/bioinformatics/btt239},
  doi       = {10.1093/bioinformatics/btt239},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/PalamaraP13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/SinghZP13,
  author    = {Angad Pal Singh and
               Samreen Zafer and
               Itsik Pe'er},
  title     = {MetaSeq: Privacy Preserving Meta-Analysis of Sequencing-Based Association
               Studies},
  booktitle = {Biocomputing 2013: Proceedings of the Pacific Symposium, Kohala Coast,
               Hawaii, USA, January 3-7, 2013},
  pages     = {356--367},
  year      = {2013},
  crossref  = {DBLP:conf/psb/2013},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb13/singh.pdf},
  timestamp = {Fri, 05 May 2017 13:11:14 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/psb/SinghZP13},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ShenSP11,
  author    = {Yufeng Shen and
               Ruijie Song and
               Itsik Pe'er},
  title     = {Coverage tradeoffs and power estimation in the design of whole-genome
               sequencing experiments for detecting association},
  journal   = {Bioinformatics},
  volume    = {27},
  number    = {14},
  pages     = {1995--1997},
  year      = {2011},
  url       = {https://doi.org/10.1093/bioinformatics/btr305},
  doi       = {10.1093/bioinformatics/btr305},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/ShenSP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShenGP11,
  author    = {Yufeng Shen and
               Yiwei Gu and
               Itsik Pe'er},
  title     = {A Hidden Markov Model for Copy Number Variant prediction from whole
               genome resequencing data},
  journal   = {{BMC} Bioinformatics},
  volume    = {12},
  number    = {{S-6}},
  pages     = {S4},
  year      = {2011},
  url       = {https://doi.org/10.1186/1471-2105-12-S6-S4},
  doi       = {10.1186/1471-2105-12-S6-S4},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bmcbi/ShenGP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SettyGP11,
  author    = {Manu N. Setty and
               Alexander Gusev and
               Itsik Pe'er},
  title     = {{HLA} Type Inference via Haplotypes Identical by Descent},
  journal   = {Journal of Computational Biology},
  volume    = {18},
  number    = {3},
  pages     = {483--493},
  year      = {2011},
  url       = {https://doi.org/10.1089/cmb.2010.0258},
  doi       = {10.1089/cmb.2010.0258},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/SettyGP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/RamachandranMP11,
  author    = {Arthi Ramachandran and
               Mariann Micsinai and
               Itsik Pe'er},
  title     = {{CONDEX:} Copy number detection in exome sequences},
  booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
               Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
  pages     = {87--93},
  year      = {2011},
  crossref  = {DBLP:conf/bibm/2011w},
  url       = {https://doi.org/10.1109/BIBMW.2011.6112359},
  doi       = {10.1109/BIBMW.2011.6112359},
  timestamp = {Sun, 21 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/bibm/RamachandranMP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/ShenCWP11,
  author    = {Yufeng Shen and
               Yee Him Cheung and
               Shuang Wang and
               Itsik Pe'er},
  title     = {A parametric Bayesian method to test the association of rare variants},
  booktitle = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
               Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
  pages     = {137--143},
  year      = {2011},
  crossref  = {DBLP:conf/bibm/2011w},
  url       = {https://doi.org/10.1109/BIBMW.2011.6112366},
  doi       = {10.1109/BIBMW.2011.6112366},
  timestamp = {Sun, 21 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/bibm/ShenCWP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ShenGP11,
  author    = {Yufeng Shen and
               Yiwei Gu and
               Itsik Pe'er},
  title     = {Poster: {A} Hidden Markov Model for Copy Number Variant prediction
               from Whole genome resequencing data},
  booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
               and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
               2011},
  pages     = {260},
  year      = {2011},
  crossref  = {DBLP:conf/iccabs/2011},
  url       = {https://doi.org/10.1109/ICCABS.2011.5729914},
  doi       = {10.1109/ICCABS.2011.5729914},
  timestamp = {Thu, 25 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iccabs/ShenGP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/ShenSP11,
  author    = {Yufeng Shen and
               Ruijie Song and
               Itsik Pe'er},
  title     = {Workshop: Coverage tradeoffs and power estimation in the design of
               whole-genome sequencing experiments for detecting association},
  booktitle = {{IEEE} 1st International Conference on Computational Advances in Bio
               and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
               2011},
  pages     = {276},
  year      = {2011},
  crossref  = {DBLP:conf/iccabs/2011},
  url       = {https://doi.org/10.1109/ICCABS.2011.5729930},
  doi       = {10.1109/ICCABS.2011.5729930},
  timestamp = {Thu, 25 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iccabs/ShenSP11},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/DewalFLP10,
  author    = {Ninad Dewal and
               Matthew L. Freedman and
               Thomas LaFramboise and
               Itsik Pe'er},
  title     = {Power to detect selective allelic amplification in genome-wide scans
               of tumor data},
  journal   = {Bioinformatics},
  volume    = {26},
  number    = {4},
  pages     = {518--528},
  year      = {2010},
  url       = {https://doi.org/10.1093/bioinformatics/btp694},
  doi       = {10.1093/bioinformatics/btp694},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/DewalFLP10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/SettyGP10,
  author    = {Manu N. Setty and
               Alexander Gusev and
               Itsik Pe'er},
  title     = {{HLA} Type Inference via Haplotypes Identical by Descent},
  booktitle = {Research in Computational Molecular Biology, 14th Annual International
               Conference, {RECOMB} 2010, Lisbon, Portugal, April 25-28, 2010. Proceedings},
  pages     = {491--505},
  year      = {2010},
  crossref  = {DBLP:conf/recomb/2010},
  url       = {https://doi.org/10.1007/978-3-642-12683-3\_32},
  doi       = {10.1007/978-3-642-12683-3\_32},
  timestamp = {Wed, 14 Nov 2018 10:56:11 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/SettyGP10},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PrabhuP09,
  author    = {Snehit Prabhu and
               Itsik Pe'er},
  title     = {Overlapping Pools for High Throughput Targeted Resequencing},
  booktitle = {Research in Computational Molecular Biology, 13th Annual International
               Conference, {RECOMB} 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings},
  pages     = {270},
  year      = {2009},
  crossref  = {DBLP:conf/recomb/2009},
  url       = {https://doi.org/10.1007/978-3-642-02008-7\_20},
  doi       = {10.1007/978-3-642-02008-7\_20},
  timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/PrabhuP09},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/StoyanovichP08,
  author    = {Julia Stoyanovich and
               Itsik Pe'er},
  title     = {MutaGeneSys: estimating individual disease susceptibility based on
               genome-wide {SNP} array data},
  journal   = {Bioinformatics},
  volume    = {24},
  number    = {3},
  pages     = {440--442},
  year      = {2008},
  url       = {https://doi.org/10.1093/bioinformatics/btm587},
  doi       = {10.1093/bioinformatics/btm587},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/StoyanovichP08},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/BarzuzaBSP08,
  author    = {Tamar Barzuza and
               Jacques S. Beckmann and
               Ron Shamir and
               Itsik Pe'er},
  title     = {Computational Problems in Perfect Phylogeny Haplotyping: Typing without
               Calling the Allele},
  journal   = {{IEEE/ACM} Trans. Comput. Biology Bioinform.},
  volume    = {5},
  number    = {1},
  pages     = {101--109},
  year      = {2008},
  url       = {http://doi.acm.org/10.1145/1343571.1343580},
  doi       = {10.1145/1343571.1343580},
  timestamp = {Thu, 14 Feb 2008 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/tcbb/BarzuzaBSP08},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamcomp/PeerPSS04,
  author    = {Itsik Pe'er and
               Tal Pupko and
               Ron Shamir and
               Roded Sharan},
  title     = {Incomplete Directed Perfect Phylogeny},
  journal   = {{SIAM} J. Comput.},
  volume    = {33},
  number    = {3},
  pages     = {590--607},
  year      = {2004},
  url       = {https://doi.org/10.1137/S0097539702406510},
  doi       = {10.1137/S0097539702406510},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/siamcomp/PeerPSS04},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/BarzuzaBSP04,
  author    = {Tamar Barzuza and
               Jacques S. Beckmann and
               Ron Shamir and
               Itsik Pe'er},
  title     = {Computational Problems in Perfect Phylogeny Haplotyping: Xor-Genotypes
               and Tag SNPs},
  booktitle = {Combinatorial Pattern Matching, 15th Annual Symposium, {CPM} 2004,
               Istanbul,Turkey, July 5-7, 2004, Proceedings},
  pages     = {14--31},
  year      = {2004},
  crossref  = {DBLP:conf/cpm/2004},
  url       = {https://doi.org/10.1007/978-3-540-27801-6\_2},
  doi       = {10.1007/978-3-540-27801-6\_2},
  timestamp = {Tue, 30 May 2017 12:57:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/BarzuzaBSP04},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PeerB03,
  author    = {Itsik Pe'er and
               Jacques S. Beckmann},
  title     = {Resolution of haplotypes and haplotype frequencies from {SNP} genotypes
               of pooled samples},
  booktitle = {Proceedings of the Sventh Annual International Conference on Computational
               Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
  pages     = {237--246},
  year      = {2003},
  crossref  = {DBLP:conf/recomb/2003},
  url       = {https://doi.org/10.1145/640075.640107},
  doi       = {10.1145/640075.640107},
  timestamp = {Tue, 06 Nov 2018 16:58:23 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/PeerB03},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PupkoPHGF02,
  author    = {Tal Pupko and
               Itsik Pe'er and
               Masami Hasegawa and
               Dan Graur and
               Nir Friedman},
  title     = {A branch-and-bound algorithm for the inference of ancestral amino-acid
               sequences when the replacement rate varies among sites: Application
               to the evolution of five gene families},
  journal   = {Bioinformatics},
  volume    = {18},
  number    = {8},
  pages     = {1116--1123},
  year      = {2002},
  url       = {https://doi.org/10.1093/bioinformatics/18.8.1116},
  doi       = {10.1093/bioinformatics/18.8.1116},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/bioinformatics/PupkoPHGF02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Ben-DorPSS02,
  author    = {Amir Ben{-}Dor and
               Itsik Pe'er and
               Ron Shamir and
               Roded Sharan},
  title     = {On the Complexity of Positional Sequencing by Hybridization},
  journal   = {Journal of Computational Biology},
  volume    = {8},
  number    = {4},
  pages     = {361--371},
  year      = {2002},
  url       = {https://doi.org/10.1089/106652701752236188},
  doi       = {10.1089/106652701752236188},
  timestamp = {Sat, 27 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/Ben-DorPSS02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/FriedmanNPP02,
  author    = {Nir Friedman and
               Matan Ninio and
               Itsik Pe'er and
               Tal Pupko},
  title     = {A Structural {EM} Algorithm for Phylogenetic Inference},
  journal   = {Journal of Computational Biology},
  volume    = {9},
  number    = {2},
  pages     = {331--353},
  year      = {2002},
  url       = {https://doi.org/10.1089/10665270252935494},
  doi       = {10.1089/10665270252935494},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/FriedmanNPP02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat/PeerSS02,
  author    = {Itsik Pe'er and
               Ron Shamir and
               Roded Sharan},
  title     = {On the Generality of Phylogenies from Incomplete Directed Characters},
  booktitle = {Algorithm Theory - {SWAT} 2002, 8th Scandinavian Workshop on Algorithm
               Theory, Turku, Finland, July 3-5, 2002 Proceedings},
  pages     = {358--367},
  year      = {2002},
  crossref  = {DBLP:conf/swat/2002},
  url       = {https://doi.org/10.1007/3-540-45471-3\_37},
  doi       = {10.1007/3-540-45471-3\_37},
  timestamp = {Fri, 26 May 2017 14:09:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/swat/PeerSS02},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/FriedmanNPP01,
  author    = {Nir Friedman and
               Matan Ninio and
               Itsik Pe'er and
               Tal Pupko},
  title     = {A structural {EM} algorithm for phylogenetic inference},
  booktitle = {Proceedings of the Fifth Annual International Conference on Computational
               Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
               April 22-25, 2001},
  pages     = {132--140},
  year      = {2001},
  crossref  = {DBLP:conf/recomb/2001},
  url       = {https://doi.org/10.1145/369133.369182},
  doi       = {10.1145/369133.369182},
  timestamp = {Tue, 06 Nov 2018 16:58:23 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/FriedmanNPP01},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR01-054,
  author    = {Piotr Berman and
               Amir Ben{-}Dor and
               Itsik Pe'er and
               Roded Sharan and
               Ron Shamir},
  title     = {On the Complexity of Positional Sequencing by Hybridization},
  journal   = {Electronic Colloquium on Computational Complexity {(ECCC)}},
  volume    = {8},
  number    = {54},
  year      = {2001},
  url       = {http://eccc.hpi-web.de/eccc-reports/2001/TR01-054/index.html},
  timestamp = {Tue, 14 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/eccc/ECCC-TR01-054},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/KarpPS00,
  author    = {Richard M. Karp and
               Itsik Pe'er and
               Ron Shamir},
  title     = {An Algorithm Combining Discrete and Continuous Methods for Optical
               Mapping},
  journal   = {Journal of Computational Biology},
  volume    = {7},
  number    = {5},
  pages     = {745--760},
  year      = {2000},
  url       = {https://doi.org/10.1089/106652701446189},
  doi       = {10.1089/106652701446189},
  timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/journals/jcb/KarpPS00},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/PeerSS00,
  author    = {Itsik Pe'er and
               Ron Shamir and
               Roded Sharan},
  title     = {Incomplete Directed Perfect Phylogeny},
  booktitle = {Combinatorial Pattern Matching, 11th Annual Symposium, {CPM} 2000,
               Montreal, Canada, June 21-23, 2000, Proceedings},
  pages     = {143--153},
  year      = {2000},
  crossref  = {DBLP:conf/cpm/2000},
  url       = {https://doi.org/10.1007/3-540-45123-4\_14},
  doi       = {10.1007/3-540-45123-4\_14},
  timestamp = {Wed, 24 May 2017 15:40:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/PeerSS00},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/PeerS00,
  author    = {Itsik Pe'er and
               Ron Shamir},
  title     = {Spectrum Alignment: Efficient Resequencing by Hybridization},
  booktitle = {Proceedings of the Eighth International Conference on Intelligent
               Systems for Molecular Biology, August 19-23, 2000, La Jolla / San
               Diego, CA, {USA}},
  pages     = {260--268},
  year      = {2000},
  crossref  = {DBLP:conf/ismb/2000},
  url       = {http://www.aaai.org/Library/ISMB/2000/ismb00-027.php},
  timestamp = {Thu, 13 Dec 2012 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/ismb/PeerS00},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/Ben-DorPSS99,
  author    = {Amir Ben{-}Dor and
               Itsik Pe'er and
               Ron Shamir and
               Roded Sharan},
  title     = {On the Complexity of Positional Sequencing by Hybridization},
  booktitle = {Combinatorial Pattern Matching, 10th Annual Symposium, {CPM} 99, Warwick
               University, UK, July 22-24, 1999, Proceedings},
  pages     = {88--100},
  year      = {1999},
  crossref  = {DBLP:conf/cpm/1999},
  url       = {https://doi.org/10.1007/3-540-48452-3\_7},
  doi       = {10.1007/3-540-48452-3\_7},
  timestamp = {Wed, 24 May 2017 15:40:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/Ben-DorPSS99},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/KarpPS99,
  author    = {Richard M. Karp and
               Itsik Pe'er and
               Ron Shamir},
  title     = {An Algorithm Combining Discrete and Continuous Methods for Optical
               Mapping},
  booktitle = {Proceedings of the Seventh International Conference on Intelligent
               Systems for Molecular Biology, August 6-10, 1999, Heidelberg, Germany},
  pages     = {159--168},
  year      = {1999},
  crossref  = {DBLP:conf/ismb/1999},
  url       = {http://www.aaai.org/Library/ISMB/1999/ismb99-019.php},
  timestamp = {Mon, 24 Jun 2013 09:48:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ismb/KarpPS99},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eccc/ECCC-TR98-071,
  author    = {Itsik Pe'er and
               Ron Shamir},
  title     = {The median problems for breakpoints are NP-complete},
  journal   = {Electronic Colloquium on Computational Complexity {(ECCC)}},
  volume    = {5},
  number    = {71},
  year      = {1998},
  url       = {http://eccc.hpi-web.de/eccc-reports/1998/TR98-071/index.html},
  timestamp = {Tue, 14 Aug 2018 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/eccc/ECCC-TR98-071},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamdm/PeerS97,
  author    = {Itsik Pe'er and
               Ron Shamir},
  title     = {Realizing Interval Graphs with Size and Distance Constraints},
  journal   = {{SIAM} J. Discrete Math.},
  volume    = {10},
  number    = {4},
  pages     = {662--687},
  year      = {1997},
  url       = {https://doi.org/10.1137/S0895480196306373},
  doi       = {10.1137/S0895480196306373},
  timestamp = {Fri, 26 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/siamdm/PeerS97},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcs/PeerS97,
  author    = {Itsik Pe'er and
               Ron Shamir},
  title     = {Satisfiability Problems on Intervals and Unit Intervals},
  journal   = {Theor. Comput. Sci.},
  volume    = {175},
  number    = {2},
  pages     = {349--372},
  year      = {1997},
  url       = {https://doi.org/10.1016/S0304-3975(96)00208-3},
  doi       = {10.1016/S0304-3975(96)00208-3},
  timestamp = {Sun, 28 May 2017 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/bib/journals/tcs/PeerS97},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esa/PeerS95,
  author    = {Itsik Pe'er and
               Ron Shamir},
  title     = {Interval Graphs with Side (and Size) Constraints},
  booktitle = {Algorithms - {ESA} '95, Third Annual European Symposium, Corfu, Greece,
               September 25-27, 1995, Proceedings},
  pages     = {142--154},
  year      = {1995},
  crossref  = {DBLP:conf/esa/1995},
  url       = {https://doi.org/10.1007/3-540-60313-1\_140},
  doi       = {10.1007/3-540-60313-1\_140},
  timestamp = {Sat, 20 May 2017 15:32:49 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/esa/PeerS95},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2018,
  editor    = {Benjamin J. Raphael},
  title     = {Research in Computational Molecular Biology - 22nd Annual International
               Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {10812},
  publisher = {Springer},
  year      = {2018},
  url       = {https://doi.org/10.1007/978-3-319-89929-9},
  doi       = {10.1007/978-3-319-89929-9},
  isbn      = {978-3-319-89928-2},
  timestamp = {Thu, 19 Apr 2018 13:47:19 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2018},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2015,
  editor    = {Teresa M. Przytycka},
  title     = {Research in Computational Molecular Biology - 19th Annual International
               Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {9029},
  publisher = {Springer},
  year      = {2015},
  url       = {https://doi.org/10.1007/978-3-319-16706-0},
  doi       = {10.1007/978-3-319-16706-0},
  isbn      = {978-3-319-16705-3},
  timestamp = {Thu, 25 May 2017 00:42:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2015},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/psb/2013,
  editor    = {Russ B. Altman and
               A. Keith Dunker and
               Lawrence Hunter and
               Tiffany Murray and
               Teri E. Klein},
  title     = {Biocomputing 2013: Proceedings of the Pacific Symposium, Kohala Coast,
               Hawaii, USA, January 3-7, 2013},
  publisher = {World Scientific Publishing},
  year      = {2013},
  url       = {http://psb.stanford.edu/psb-online/proceedings/psb13/},
  isbn      = {978-1-62748-016-1},
  timestamp = {Fri, 05 May 2017 13:11:14 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/psb/2013},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bibm/2011w,
  title     = {2011 {IEEE} International Conference on Bioinformatics and Biomedicine
               Workshops, {BIBMW} 2011, Atlanta, GA, USA, November 12-15, 2011},
  publisher = {{IEEE} Computer Society},
  year      = {2011},
  url       = {http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=6105661},
  isbn      = {978-1-4577-1612-6},
  timestamp = {Thu, 07 Jan 2016 11:16:38 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/bibm/2011w},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/iccabs/2011,
  editor    = {Ion I. Mandoiu and
               Satoru Miyano and
               Teresa M. Przytycka and
               Sanguthevar Rajasekaran},
  title     = {{IEEE} 1st International Conference on Computational Advances in Bio
               and Medical Sciences, {ICCABS} 2011, Orlando, FL, USA, February 3-5,
               2011},
  publisher = {{IEEE} Computer Society},
  year      = {2011},
  url       = {http://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=5724107},
  isbn      = {978-1-61284-851-8},
  timestamp = {Fri, 08 Aug 2014 15:28:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/iccabs/2011},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2010,
  editor    = {Bonnie Berger},
  title     = {Research in Computational Molecular Biology, 14th Annual International
               Conference, {RECOMB} 2010, Lisbon, Portugal, April 25-28, 2010. Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {6044},
  publisher = {Springer},
  year      = {2010},
  url       = {https://doi.org/10.1007/978-3-642-12683-3},
  doi       = {10.1007/978-3-642-12683-3},
  isbn      = {978-3-642-12682-6},
  timestamp = {Wed, 14 Nov 2018 10:56:11 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2010},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2009,
  editor    = {Serafim Batzoglou},
  title     = {Research in Computational Molecular Biology, 13th Annual International
               Conference, {RECOMB} 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {5541},
  publisher = {Springer},
  year      = {2009},
  url       = {https://doi.org/10.1007/978-3-642-02008-7},
  doi       = {10.1007/978-3-642-02008-7},
  isbn      = {978-3-642-02007-0},
  timestamp = {Thu, 25 May 2017 00:42:22 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2009},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cpm/2004,
  editor    = {S{\"{u}}leyman Cenk Sahinalp and
               S. Muthukrishnan and
               Ugur Dogrus{\"{o}}z},
  title     = {Combinatorial Pattern Matching, 15th Annual Symposium, {CPM} 2004,
               Istanbul,Turkey, July 5-7, 2004, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {3109},
  publisher = {Springer},
  year      = {2004},
  url       = {https://doi.org/10.1007/b98377},
  doi       = {10.1007/b98377},
  isbn      = {3-540-22341-X},
  timestamp = {Tue, 30 May 2017 12:57:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/2004},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2003,
  editor    = {Martin Vingron and
               Sorin Istrail and
               Pavel A. Pevzner and
               Michael S. Waterman and
               Webb Miller},
  title     = {Proceedings of the Sventh Annual International Conference on Computational
               Biology, {RECOMB} 2003, Berlin, Germany, April 10-13, 2003},
  publisher = {{ACM}},
  year      = {2003},
  url       = {https://doi.org/10.1145/640075},
  doi       = {10.1145/640075},
  isbn      = {1-58113-635-8},
  timestamp = {Tue, 06 Nov 2018 16:58:23 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2003},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/swat/2002,
  editor    = {Martti Penttonen and
               Erik Meineche Schmidt},
  title     = {Algorithm Theory - {SWAT} 2002, 8th Scandinavian Workshop on Algorithm
               Theory, Turku, Finland, July 3-5, 2002 Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {2368},
  publisher = {Springer},
  year      = {2002},
  url       = {https://doi.org/10.1007/3-540-45471-3},
  doi       = {10.1007/3-540-45471-3},
  isbn      = {3-540-43866-1},
  timestamp = {Fri, 26 May 2017 14:09:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/swat/2002},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/recomb/2001,
  editor    = {Thomas Lengauer},
  title     = {Proceedings of the Fifth Annual International Conference on Computational
               Biology, {RECOMB} 2001, Montr{\'{e}}al, Qu{\'{e}}bec, Canada,
               April 22-25, 2001},
  publisher = {{ACM}},
  year      = {2001},
  url       = {https://doi.org/10.1145/369133},
  doi       = {10.1145/369133},
  isbn      = {1-58113-353-7},
  timestamp = {Tue, 06 Nov 2018 16:58:23 +0100},
  biburl    = {https://dblp.org/rec/bib/conf/recomb/2001},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cpm/2000,
  editor    = {Raffaele Giancarlo and
               David Sankoff},
  title     = {Combinatorial Pattern Matching, 11th Annual Symposium, {CPM} 2000,
               Montreal, Canada, June 21-23, 2000, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {1848},
  publisher = {Springer},
  year      = {2000},
  url       = {https://doi.org/10.1007/3-540-45123-4},
  doi       = {10.1007/3-540-45123-4},
  isbn      = {3-540-67633-3},
  timestamp = {Wed, 24 May 2017 15:40:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/2000},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/2000,
  editor    = {Philip E. Bourne and
               Michael Gribskov and
               Russ B. Altman and
               Nancy Jensen and
               Debra A. Hope and
               Thomas Lengauer and
               Julie C. Mitchell and
               Eric D. Scheeff and
               Chris Smith and
               Shawn Strande and
               Helge Weissig},
  title     = {Proceedings of the Eighth International Conference on Intelligent
               Systems for Molecular Biology, August 19-23, 2000, La Jolla / San
               Diego, CA, {USA}},
  publisher = {{AAAI}},
  year      = {2000},
  isbn      = {1-57735-115-0},
  timestamp = {Fri, 04 May 2007 21:11:35 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ismb/2000},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/cpm/1999,
  editor    = {Maxime Crochemore and
               Mike Paterson},
  title     = {Combinatorial Pattern Matching, 10th Annual Symposium, {CPM} 99, Warwick
               University, UK, July 22-24, 1999, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {1645},
  publisher = {Springer},
  year      = {1999},
  url       = {https://doi.org/10.1007/3-540-48452-3},
  doi       = {10.1007/3-540-48452-3},
  isbn      = {3-540-66278-2},
  timestamp = {Wed, 24 May 2017 15:40:44 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/cpm/1999},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ismb/1999,
  editor    = {Thomas Lengauer and
               Reinhard Schneider and
               Peer Bork and
               Douglas L. Brutlag and
               Janice I. Glasgow and
               Hans{-}Werner Mewes and
               Ralf Zimmer},
  title     = {Proceedings of the Seventh International Conference on Intelligent
               Systems for Molecular Biology, August 6-10, 1999, Heidelberg, Germany},
  publisher = {{AAAI}},
  year      = {1999},
  isbn      = {1-57735-083-9},
  timestamp = {Mon, 24 Jun 2013 09:48:15 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/ismb/1999},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/esa/1995,
  editor    = {Paul G. Spirakis},
  title     = {Algorithms - {ESA} '95, Third Annual European Symposium, Corfu, Greece,
               September 25-27, 1995, Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {979},
  publisher = {Springer},
  year      = {1995},
  url       = {https://doi.org/10.1007/3-540-60313-1},
  doi       = {10.1007/3-540-60313-1},
  isbn      = {3-540-60313-1},
  timestamp = {Sat, 20 May 2017 15:32:49 +0200},
  biburl    = {https://dblp.org/rec/bib/conf/esa/1995},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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