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ORCIDBibTeX records: Martin J. O'Connor
@article{DBLP:journals/corr/abs-2312-09107,
author = {Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Mete Ugur Akdogan and
Josef Hardi and
Mark A. Musen},
title = {A Comprehensive Approach to Ensuring Quality in Spreadsheet-Based
Metadata},
journal = {CoRR},
volume = {abs/2312.09107},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2312.09107},
doi = {10.48550/ARXIV.2312.09107},
eprinttype = {arXiv},
eprint = {2312.09107},
timestamp = {Tue, 09 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2312-09107.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-02836,
author = {Mark A. Musen and
Martin J. O'Connor and
Erik Schultes and
Marcos Mart{\'{\i}}nez Romero and
Josef Hardi and
John Graybeal},
title = {Modeling community standards for metadata as templates makes data
{FAIR}},
journal = {CoRR},
volume = {abs/2208.02836},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.02836},
doi = {10.48550/ARXIV.2208.02836},
eprinttype = {arXiv},
eprint = {2208.02836},
timestamp = {Wed, 10 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-02836.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RomeroOEWHGM19,
author = {Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Attila L. Egyedi and
Debra Willrett and
Josef Hardi and
John Graybeal and
Mark A. Musen},
title = {Using association rule mining and ontologies to generate metadata
recommendations from multiple biomedical databases},
journal = {Database J. Biol. Databases Curation},
volume = {2019},
pages = {baz059},
year = {2019},
url = {https://doi.org/10.1093/database/baz059},
doi = {10.1093/DATABASE/BAZ059},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RomeroOEWHGM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorWRHWEGM19,
author = {Martin J. O'Connor and
Denise B. Warzel and
Marcos Mart{\'{\i}}nez Romero and
Josef Hardi and
Debra Willrett and
Aras Efekhari and
John Graybeal and
Mark A. Musen},
title = {Unleashing the value of Common Data Elements through the {CEDAR} Workbench},
booktitle = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 16-20, 2019},
publisher = {{AMIA}},
year = {2019},
url = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3202888-1.4575021/3203165-1.4575018},
timestamp = {Wed, 17 Apr 2024 11:47:08 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorWRHWEGM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-09270,
author = {Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Attila L. Egyedi and
Debra Willrett and
Josef Hardi and
John Graybeal and
Mark A. Musen},
title = {Using association rule mining and ontologies to generate metadata
recommendations from multiple biomedical databases},
journal = {CoRR},
volume = {abs/1903.09270},
year = {2019},
url = {http://arxiv.org/abs/1903.09270},
eprinttype = {arXiv},
eprint = {1903.09270},
timestamp = {Mon, 01 Apr 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1903-09270.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-06480,
author = {Rafael S. Gon{\c{c}}alves and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Attila L. Egyedi and
Debra Willrett and
John Graybeal and
Mark A. Musen},
title = {The {CEDAR} Workbench: An Ontology-Assisted Environment for Authoring
Metadata that Describe Scientific Experiments},
journal = {CoRR},
volume = {abs/1905.06480},
year = {2019},
url = {http://arxiv.org/abs/1905.06480},
eprinttype = {arXiv},
eprint = {1905.06480},
timestamp = {Tue, 06 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1905-06480.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BukhariROEWGMCK18,
author = {Syed Ahmad Chan Bukhari and
Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Attila L. Egyedi and
Debra Willrett and
John Graybeal and
Mark A. Musen and
Kei{-}Hoi Cheung and
Steven H. Kleinstein},
title = {{CEDAR} OnDemand: a browser extension to generate ontology-based scientific
metadata},
journal = {{BMC} Bioinform.},
volume = {19},
number = {1},
pages = {268:1--268:6},
year = {2018},
url = {https://doi.org/10.1186/s12859-018-2247-6},
doi = {10.1186/S12859-018-2247-6},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BukhariROEWGMCK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/GoncalvesNROGM18,
author = {Rafael S. Gon{\c{c}}alves and
Csongor I. Nyulas and
Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
John Graybeal and
Mark A. Musen},
editor = {Marieke van Erp and
Medha Atre and
Vanessa L{\'{o}}pez and
Kavitha Srinivas and
Carolina Fortuna},
title = {Using Ontologies to Drive the Creation of High-Quality Metadata in
{CEDAR}},
booktitle = {Proceedings of the {ISWC} 2018 Posters {\&} Demonstrations, Industry
and Blue Sky Ideas Tracks co-located with 17th International Semantic
Web Conference {(ISWC} 2018), Monterey, USA, October 8th - to - 12th,
2018},
series = {{CEUR} Workshop Proceedings},
volume = {2180},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2180/paper-19.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/semweb/GoncalvesNROGM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/EgyediORWHGM18,
author = {Attila L. Egyedi and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Debra Willrett and
Josef Hardi and
John Graybeal and
Mark A. Musen},
editor = {Andra Waagmeester and
Christopher J. O. Baker and
Andrea Splendiani and
Oya Deniz Beyan and
M. Scott Marshall},
title = {Using semantic technologies to enhance metadata submissions to public
repositories in biomedicine},
booktitle = {Proceedings of the 11th International Conference Semantic Web Applications
and Tools for Life Sciences, {SWAT4LS} 2018, Antwerp, Belgium, December
3-6, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2275},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2275/paper1.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:03 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/EgyediORWHGM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/RomeroJOGPM17,
author = {Marcos Mart{\'{\i}}nez Romero and
Cl{\'{e}}ment Jonquet and
Martin J. O'Connor and
John Graybeal and
Alejandro Pazos and
Mark A. Musen},
title = {{NCBO} Ontology Recommender 2.0: an enhanced approach for biomedical
ontology recommendation},
journal = {J. Biomed. Semant.},
volume = {8},
number = {1},
pages = {21:1--21:22},
year = {2017},
url = {https://doi.org/10.1186/s13326-017-0128-y},
doi = {10.1186/S13326-017-0128-Y},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/RomeroJOGPM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RomeroOSPWEGGM17,
author = {Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Ravi D. Shankar and
Maryam Panahiazar and
Debra Willrett and
Attila Levente Egyedi and
Olivier Gevaert and
John Graybeal and
Mark A. Musen},
title = {Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations},
booktitle = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 4-8, 2017},
publisher = {{AMIA}},
year = {2017},
url = {https://knowledge.amia.org/65881-amiab-1.4254737/t003-1.4258387/f003-1.4258388/2731122-1.4258599/2731025-1.4258596},
timestamp = {Wed, 17 Apr 2024 11:47:24 +0200},
biburl = {https://dblp.org/rec/conf/amia/RomeroOSPWEGGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RomeroODVWEGM17,
author = {Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Michael Dorf and
Jennifer Vendetti and
Debra Willrett and
Attila L. Egyedi and
John Graybeal and
Mark A. Musen},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Supporting Ontology-Based Standardization of Biomedical Metadata in
the {CEDAR} Workbench},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RomeroODVWEGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/GoncalvesORGM17,
author = {Rafael S. Gon{\c{c}}alves and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
John Graybeal and
Mark A. Musen},
editor = {Daniel Garijo and
Willem Robert van Hage and
Tomi Kauppinen and
Tobias Kuhn and
Jun Zhao},
title = {Metadata in the BioSample Online Repository are Impaired by Numerous
Anomalies},
booktitle = {Proceedings of the First Workshop on Enabling Open Semantic Science
co-located with 16th International Semantic Web Conference {(ISWC}
2017), Vienna, Austria, October 21st, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {1931},
pages = {39--46},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-1931/paper-06.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:05 +0100},
biburl = {https://dblp.org/rec/conf/semweb/GoncalvesORGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/GoncalvesOREWGM17,
author = {Rafael S. Gon{\c{c}}alves and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Attila L. Egyedi and
Debra Willrett and
John Graybeal and
Mark A. Musen},
editor = {Claudia d'Amato and
Miriam Fern{\'{a}}ndez and
Valentina A. M. Tamma and
Freddy L{\'{e}}cu{\'{e}} and
Philippe Cudr{\'{e}}{-}Mauroux and
Juan F. Sequeda and
Christoph Lange and
Jeff Heflin},
title = {The {CEDAR} Workbench: An Ontology-Assisted Environment for Authoring
Metadata that Describe Scientific Experiments},
booktitle = {The Semantic Web - {ISWC} 2017 - 16th International Semantic Web Conference,
Vienna, Austria, October 21-25, 2017, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {10588},
pages = {103--110},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-68204-4\_10},
doi = {10.1007/978-3-319-68204-4\_10},
timestamp = {Tue, 06 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/semweb/GoncalvesOREWGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/swat4ls/EgyediORWHGM17,
author = {Attila L. Egyedi and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Debra Willrett and
Josef Hardi and
John Graybeal and
Mark A. Musen},
editor = {Adrian Paschke and
Albert Burger and
Andrea Splendiani and
M. Scott Marshall and
Paolo Romano and
Valentina Presutti},
title = {Embracing Semantic Technology for Better Metadata Authoring in Biomedicine},
booktitle = {Proceedings of the 10th International Conference on Semantic Web Applications
and Tools for Health Care and Life Sciences {(SWAT4LS} 2017), Rome,
Italy, December 4-7, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2042},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2042/paper14.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/swat4ls/EgyediORWHGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1708-01286,
author = {Rafael S. Gon{\c{c}}alves and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
John Graybeal and
Mark A. Musen},
title = {Metadata in the BioSample Online Repository are Impaired by Numerous
Anomalies},
journal = {CoRR},
volume = {abs/1708.01286},
year = {2017},
url = {http://arxiv.org/abs/1708.01286},
eprinttype = {arXiv},
eprint = {1708.01286},
timestamp = {Tue, 06 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1708-01286.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MusenOREWG16,
author = {Mark A. Musen and
Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Attila Levente Egyedi and
Debra Willrett and
John Graybeal},
title = {{CEDAR:} Better Data Sharing Through the Authoring of Better Metadata},
booktitle = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 12-16, 2016},
publisher = {{AMIA}},
year = {2016},
url = {https://knowledge.amia.org/amia-63300-1.3360278/t008-1.3362585/f008-1.3362586/2497392-1.3362623/2498407-1.3362618},
timestamp = {Wed, 17 Apr 2024 11:47:32 +0200},
biburl = {https://dblp.org/rec/conf/amia/MusenOREWG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ekaw/OConnorREWGM16,
author = {Martin J. O'Connor and
Marcos Mart{\'{\i}}nez Romero and
Attila L. Egyedi and
Debra Willrett and
John Graybeal and
Mark A. Musen},
editor = {Eva Blomqvist and
Paolo Ciancarini and
Francesco Poggi and
Fabio Vitali},
title = {An Open Repository Model for Acquiring Knowledge About Scientific
Experiments},
booktitle = {Knowledge Engineering and Knowledge Management - 20th International
Conference, {EKAW} 2016, Bologna, Italy, November 19-23, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10024},
pages = {762--777},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-49004-5\_49},
doi = {10.1007/978-3-319-49004-5\_49},
timestamp = {Fri, 27 Mar 2020 09:00:58 +0100},
biburl = {https://dblp.org/rec/conf/ekaw/OConnorREWGM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/RomeroJOGPM16,
author = {Marcos Mart{\'{\i}}nez Romero and
Cl{\'{e}}ment Jonquet and
Martin J. O'Connor and
John Graybeal and
Alejandro Pazos and
Mark A. Musen},
title = {{NCBO} Ontology Recommender 2.0: An Enhanced Approach for Biomedical
Ontology Recommendation},
journal = {CoRR},
volume = {abs/1611.05973},
year = {2016},
url = {http://arxiv.org/abs/1611.05973},
eprinttype = {arXiv},
eprint = {1611.05973},
timestamp = {Fri, 05 Oct 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/RomeroJOGPM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/MusenBCDDGBKKOP15,
author = {Mark A. Musen and
Carol A. Bean and
Kei{-}Hoi Cheung and
Michel Dumontier and
Kim A. Durante and
Olivier Gevaert and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Purvesh Khatri and
Steven H. Kleinstein and
Martin J. O'Connor and
Yannick Pouliot and
Philippe Rocca{-}Serra and
Susanna{-}Assunta Sansone and
Jeffrey A. Wiser},
title = {The center for expanded data annotation and retrieval},
journal = {J. Am. Medical Informatics Assoc.},
volume = {22},
number = {6},
pages = {1148--1152},
year = {2015},
url = {https://doi.org/10.1093/jamia/ocv048},
doi = {10.1093/JAMIA/OCV048},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/MusenBCDDGBKKOP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ws/HassanpourOD14,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
title = {Clustering rule bases using ontology-based similarity measures},
journal = {J. Web Semant.},
volume = {25},
pages = {1--8},
year = {2014},
url = {https://doi.org/10.1016/j.websem.2014.03.001},
doi = {10.1016/J.WEBSEM.2014.03.001},
timestamp = {Tue, 29 Jan 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ws/HassanpourOD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/HassanpourOD13,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
title = {A semantic-based method for extracting concept definitions from scientific
publications: evaluation in the autism phenotype domain},
journal = {J. Biomed. Semant.},
volume = {4},
pages = {14},
year = {2013},
url = {http://www.jbiomedsem.com/content/4/1/14},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biomedsem/HassanpourOD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/expert/GravierFLO12,
author = {Christophe Gravier and
Jacques Fayolle and
J{\'{e}}r{\'{e}}my Lardon and
Martin J. O'Connor},
title = {Adaptive System for Collaborative Online Laboratories},
journal = {{IEEE} Intell. Syst.},
volume = {27},
number = {4},
pages = {11--17},
year = {2012},
url = {https://doi.org/10.1109/MIS.2011.1},
doi = {10.1109/MIS.2011.1},
timestamp = {Fri, 06 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/expert/GravierFLO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iceis/OrlandoRHODM12,
author = {Jo{\~{a}}o Paulo Orlando and
Adriano Rivolli and
Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das and
Dilvan A. Moreira},
editor = {Leszek A. Maciaszek and
Alfredo Cuzzocrea and
Jos{\'{e}} Cordeiro},
title = {{SWRL} Rule Editor - {A} Web Application as Rich as Desktop Business
Rule Editors},
booktitle = {{ICEIS} 2012 - Proceedings of the 14th International Conference on
Enterprise Information Systems, Volume 2, Wroclaw, Poland, 28 June
- 1 July, 2012},
pages = {258--263},
publisher = {SciTePress},
year = {2012},
timestamp = {Wed, 22 Aug 2012 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/iceis/OrlandoRHODM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/owled/OConnorD12,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Pavel Klinov and
Matthew Horridge},
title = {A Pair of {OWL} 2 {RL} Reasoners},
booktitle = {Proceedings of {OWL:} Experiences and Directions Workshop 2012, Heraklion,
Crete, Greece, May 27-28, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {849},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-849/paper\_31.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/owled/OConnorD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ao/Rocca-SerraROWSGCBSSP11,
author = {Philippe Rocca{-}Serra and
Alan Ruttenberg and
Martin J. O'Connor and
Patricia L. Whetzel and
Daniel Schober and
Jay Greenbaum and
M{\'{e}}lanie Courtot and
Ryan Remy Brinkman and
Susanna{-}Assunta Sansone and
Richard H. Scheuermann and
Bjoern Peters},
title = {Overcoming the ontology enrichment bottleneck with Quick Term Templates},
journal = {Appl. Ontology},
volume = {6},
number = {1},
pages = {13--22},
year = {2011},
url = {https://doi.org/10.3233/AO-2011-0086},
doi = {10.3233/AO-2011-0086},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ao/Rocca-SerraROWSGCBSSP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aime/OConnorHD11,
author = {Martin J. O'Connor and
Genaro Hern{\'{a}}ndez and
Amar K. Das},
editor = {Mor Peleg and
Nada Lavrac and
Carlo Combi},
title = {A Rule-Based Method for Specifying and Querying Temporal Abstractions},
booktitle = {Artificial Intelligence in Medicine - 13th Conference on Artificial
Intelligence in Medicine, {AIME} 2011, Bled, Slovenia, July 2-6, 2011.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6747},
pages = {255--259},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22218-4\_32},
doi = {10.1007/978-3-642-22218-4\_32},
timestamp = {Sat, 18 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/aime/OConnorHD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aime/RichardsOMUTD11,
author = {Amanda Richards and
Martin J. O'Connor and
Susana B. Martins and
Michael Uehara{-}Bingen and
Samson W. Tu and
Amar K. Das},
editor = {Mor Peleg and
Nada Lavrac and
Carlo Combi},
title = {Web-Based Querying and Temporal Visualization of Longitudinal Clinical
Data},
booktitle = {Artificial Intelligence in Medicine - 13th Conference on Artificial
Intelligence in Medicine, {AIME} 2011, Bled, Slovenia, July 2-6, 2011.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6747},
pages = {260--264},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22218-4\_33},
doi = {10.1007/978-3-642-22218-4\_33},
timestamp = {Sun, 21 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aime/RichardsOMUTD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kcap/OConnorD11,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Mark A. Musen and
{\'{O}}scar Corcho},
title = {Acquiring {OWL} ontologies from {XML} documents},
booktitle = {Proceedings of the 6th International Conference on Knowledge Capture
{(K-CAP} 2011), June 26-29, 2011, Banff, Alberta, Canada},
pages = {17--24},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/1999676.1999681},
doi = {10.1145/1999676.1999681},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kcap/OConnorD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/HassanpourOD11,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Nick Bassiliades and
Guido Governatori and
Adrian Paschke},
title = {A Framework for the Automatic Extraction of Rules from Online Text},
booktitle = {Rule-Based Reasoning, Programming, and Applications - 5th International
Symposium, RuleML 2011 - Europe, Barcelona, Spain, July 19-21, 2011.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6826},
pages = {266--280},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22546-8\_21},
doi = {10.1007/978-3-642-22546-8\_21},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/ruleml/HassanpourOD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/OConnorRMBTD11,
author = {Martin J. O'Connor and
Amanda Richards and
Susana B. Martins and
Mike Bingen and
Samson W. Tu and
Amar K. Das},
editor = {Stefano Bragaglia and
Carlos Viegas Dam{\'{a}}sio and
Marco Montali and
Alun D. Preece and
Charles J. Petrie and
Mark Proctor and
Umberto Straccia},
title = {SWEETInfo: a Web-Based System for Visualizing and Querying Temporal
Data},
booktitle = {Proceedings of the 5th International RuleML2011@BRF Challenge, co-located
with the 5th International Rule Symposium, Fort Lauderdale, Florida,
USA, November 3-5, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {799},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-799/paper7.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:58 +0100},
biburl = {https://dblp.org/rec/conf/ruleml/OConnorRMBTD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/webist/OConnorBRTD11,
author = {Martin J. O'Connor and
Mike Bingen and
Amanda Richards and
Samson W. Tu and
Amar K. Das},
editor = {Jos{\'{e}} Cordeiro and
Joaquim Filipe},
title = {Web-based Exploration of Temporal Data in Biomedicine},
booktitle = {{WEBIST} 2011, Proceedings of the 7th International Conference on
Web Information Systems and Technologies, Noordwijkerhout, The Netherlands,
6-9 May, 2011},
pages = {352--359},
publisher = {SciTePress},
year = {2011},
timestamp = {Thu, 26 Jan 2012 19:29:01 +0100},
biburl = {https://dblp.org/rec/conf/webist/OConnorBRTD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wims/WlodarczykROM11,
author = {Tomasz Wiktor Wlodarczyk and
Chunming Rong and
Martin J. O'Connor and
Mark A. Musen},
editor = {Rajendra Akerkar},
title = {{SWRL-F:} a fuzzy logic extension of the semantic web rule language},
booktitle = {Proceedings of the International Conference on Web Intelligence, Mining
and Semantics, {WIMS} 2011, Sogndal, Norway, May 25 - 27, 2011},
pages = {39},
publisher = {{ACM}},
year = {2011},
url = {https://doi.org/10.1145/1988688.1988735},
doi = {10.1145/1988688.1988735},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wims/WlodarczykROM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/OConnorD10,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Ana L. N. Fred and
Joaquim Filipe and
Hugo Gamboa},
title = {A Lightweight Model for Representing and Reasoning with Temporal Information
in Biomedical Ontologies},
booktitle = {{HEALTHINF} 2010 - Proceedings of the Third International Conference
on Health Informatics, Valencia, Spain, January 20-23, 2010},
pages = {90--97},
publisher = {{INSTICC} Press},
year = {2010},
timestamp = {Tue, 03 May 2011 16:29:34 +0200},
biburl = {https://dblp.org/rec/conf/biostec/OConnorD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/OConnorD10a,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Ana L. N. Fred and
Joaquim Filipe and
Hugo Gamboa},
title = {A Method for Representing and Querying Temporal Information in {OWL}},
booktitle = {Biomedical Engineering Systems and Technologies - Third International
Joint Conference, {BIOSTEC} 2010, Valencia, Spain, January 20-23,
2010, Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {127},
pages = {97--110},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-18472-7\_8},
doi = {10.1007/978-3-642-18472-7\_8},
timestamp = {Sat, 19 Oct 2019 20:01:12 +0200},
biburl = {https://dblp.org/rec/conf/biostec/OConnorD10a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/esws/HassanpourOD10,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Lora Aroyo and
Grigoris Antoniou and
Eero Hyv{\"{o}}nen and
Annette ten Teije and
Heiner Stuckenschmidt and
Liliana Cabral and
Tania Tudorache},
title = {A Software Tool for Visualizing, Managing and Eliciting {SWRL} Rules},
booktitle = {The Semantic Web: Research and Applications, 7th Extended Semantic
Web Conference, {ESWC} 2010, Heraklion, Crete, Greece, May 30 - June
3, 2010, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6089},
pages = {381--385},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-13489-0\_28},
doi = {10.1007/978-3-642-13489-0\_28},
timestamp = {Tue, 14 May 2019 10:00:44 +0200},
biburl = {https://dblp.org/rec/conf/esws/HassanpourOD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/OConnorD10,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Charles Safran and
Shane R. Reti and
Heimar F. Marin},
title = {Semantic Reasoning with XML-based Biomedical Information Models},
booktitle = {{MEDINFO} 2010 - Proceedings of the 13th World Congress on Medical
Informatics, Cape Town, South Africa, September 12-15, 2010},
series = {Studies in Health Technology and Informatics},
volume = {160},
pages = {986--990},
publisher = {{IOS} Press},
year = {2010},
url = {https://doi.org/10.3233/978-1-60750-588-4-986},
doi = {10.3233/978-1-60750-588-4-986},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/OConnorD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/owled/OConnorHM10,
author = {Martin J. O'Connor and
Christian Halaschek{-}Wiener and
Mark A. Musen},
editor = {Evren Sirin and
Kendall Clark},
title = {M\({}^{\mbox{2}}\): {A} Language for Mapping Spreadsheets to {OWL}},
booktitle = {Proceedings of the 7th International Workshop on {OWL:} Experiences
and Directions {(OWLED} 2010), San Francisco, California, USA, June
21-22, 2010},
series = {{CEUR} Workshop Proceedings},
volume = {614},
publisher = {CEUR-WS.org},
year = {2010},
url = {https://ceur-ws.org/Vol-614/owled2010\_submission\_17.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/owled/OConnorHM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/HassanpourOD10,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Mike Dean and
John Hall and
Antonino Rotolo and
Said Tabet},
title = {Visualizing Logical Dependencies in {SWRL} Rule Bases},
booktitle = {Semantic Web Rules - International Symposium, RuleML 2010, Washington,
DC, USA, October 21-23, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6403},
pages = {259--272},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16289-3\_22},
doi = {10.1007/978-3-642-16289-3\_22},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/ruleml/HassanpourOD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/WlodarczykORM10,
author = {Tomasz Wiktor Wlodarczyk and
Martin J. O'Connor and
Chunming Rong and
Mark A. Musen},
editor = {Fernando Bobillo and
Rommel N. Carvalho and
Paulo Cesar G. da Costa and
Claudia d'Amato and
Nicola Fanizzi and
Kathryn B. Laskey and
Kenneth J. Laskey and
Thomas Lukasiewicz and
Trevor Martin and
Matthias Nickles and
Michael Pool},
title = {{SWRL-F} - {A} Fuzzy Logic Extension of the Semantic Web Rule Language},
booktitle = {Proceedings of the 6th International Workshop on Uncertainty Reasoning
for the Semantic Web {(URSW} 2010), collocated with the 9th International
Semantic Web Conference (ISWC-2010), Shanghai, China, November 7,
2010},
series = {{CEUR} Workshop Proceedings},
volume = {654},
pages = {97--100},
publisher = {CEUR-WS.org},
year = {2010},
url = {https://ceur-ws.org/Vol-654/pospaper1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/WlodarczykORM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/OConnorHM10,
author = {Martin J. O'Connor and
Christian Halaschek{-}Wiener and
Mark A. Musen},
editor = {Peter F. Patel{-}Schneider and
Yue Pan and
Pascal Hitzler and
Peter Mika and
Lei Zhang and
Jeff Z. Pan and
Ian Horrocks and
Birte Glimm},
title = {Mapping Master: {A} Flexible Approach for Mapping Spreadsheets to
{OWL}},
booktitle = {The Semantic Web - {ISWC} 2010 - 9th International Semantic Web Conference,
{ISWC} 2010, Shanghai, China, November 7-11, 2010, Revised Selected
Papers, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {6497},
pages = {194--208},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-17749-1\_13},
doi = {10.1007/978-3-642-17749-1\_13},
timestamp = {Tue, 12 Apr 2022 14:46:29 +0200},
biburl = {https://dblp.org/rec/conf/semweb/OConnorHM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aiedam/OConnorNTBOM09,
author = {Martin J. O'Connor and
Csongor Nyulas and
Samson W. Tu and
David L. Buckeridge and
Anna Okhmatovskaia and
Mark A. Musen},
title = {Software-engineering challenges of building and deploying reusable
problem solvers},
journal = {Artif. Intell. Eng. Des. Anal. Manuf.},
volume = {23},
number = {4},
pages = {339--356},
year = {2009},
url = {https://doi.org/10.1017/S0890060409990047},
doi = {10.1017/S0890060409990047},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/aiedam/OConnorNTBOM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/OConnorSPD09,
author = {Martin J. O'Connor and
Ravi D. Shankar and
David B. Parrish and
Amar K. Das},
title = {Knowledge-data integration for temporal reasoning in a clinical trial
system},
journal = {Int. J. Medical Informatics},
volume = {78},
number = {Supplement-1},
pages = {S77--S85},
year = {2009},
url = {https://doi.org/10.1016/j.ijmedinf.2008.07.013},
doi = {10.1016/J.IJMEDINF.2008.07.013},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijmi/OConnorSPD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/IzadiBOTONM09,
author = {Masoumeh T. Izadi and
David L. Buckeridge and
Anna Okhmatovskaia and
Samson W. Tu and
Martin J. O'Connor and
Csongor Nyulas and
Mark A. Musen},
title = {A Bayesian Network Model for Analysis of Detection Performance in
Surveillance Systems},
booktitle = {{AMIA} 2009, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2009},
publisher = {{AMIA}},
year = {2009},
url = {https://knowledge.amia.org/amia-55142-a2009a-1.626575/t-001-1.627318/f-001-1.627319/a-054-1.627590/a-055-1.627587},
timestamp = {Wed, 17 Apr 2024 11:48:10 +0200},
biburl = {https://dblp.org/rec/conf/amia/IzadiBOTONM09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LevyOR09,
author = {Mia A. Levy and
Martin J. O'Connor and
Daniel L. Rubin},
title = {Semantic Reasoning with Image Annotations for Tumor Assessment},
booktitle = {{AMIA} 2009, American Medical Informatics Association Annual Symposium,
San Francisco, CA, USA, November 14-18, 2009},
publisher = {{AMIA}},
year = {2009},
url = {https://knowledge.amia.org/amia-55142-a2009a-1.626575/t-001-1.627318/f-001-1.627319/a-070-1.627542/a-071-1.627539},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/LevyOR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/HassanpourOD09,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Guido Governatori and
John Hall and
Adrian Paschke},
title = {Exploration of {SWRL} Rule Bases through Visualization, Paraphrasing,
and Categorization of Rules},
booktitle = {Rule Interchange and Applications, International Symposium, RuleML
2009, Las Vegas, Nevada, USA, November 5-7, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5858},
pages = {246--261},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04985-9\_23},
doi = {10.1007/978-3-642-04985-9\_23},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/ruleml/HassanpourOD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/HassanpourOD09a,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Yuh{-}Jong Hu and
Ching{-}Long Yeh and
Wolfgang Laun and
Guido Governatori and
John Hall and
Adrian Paschke},
title = {A Rule Management and Elicitation Tool for {SWRL} Rule Bases},
booktitle = {Proceedings of the 3rd International RuleML-2009 Challenge, collocated
with the 3rd International Symposium on Rules, Applications and Interoperability
(RuleML-2009), Las Vegas, Nevada, USA, November 5-7, 2009},
series = {{CEUR} Workshop Proceedings},
volume = {549},
publisher = {CEUR-WS.org},
year = {2009},
url = {https://ceur-ws.org/Vol-549/paper1.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:58 +0100},
biburl = {https://dblp.org/rec/conf/ruleml/HassanpourOD09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/HassanpourOD08,
author = {Saeed Hassanpour and
Martin J. O'Connor and
Amar K. Das},
editor = {Rinke Hoekstra and
Peter F. Patel{-}Schneider},
title = {Axiom{\'{e}}: {A} Tool for the Elicitation and Management of
{SWRL} Rules},
booktitle = {Proceedings of the 5th International Workshop on {OWL:} Experiences
and Directions {(OWLED} 2009), Chantilly, VA, United States, October
23-24, 2009},
series = {{CEUR} Workshop Proceedings},
volume = {529},
publisher = {CEUR-WS.org},
year = {2009},
url = {https://ceur-ws.org/Vol-529/owled2009\_submission\_41.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:05 +0100},
biburl = {https://dblp.org/rec/conf/semweb/HassanpourOD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/OConnorD08,
author = {Martin J. O'Connor and
Amar K. Das},
editor = {Rinke Hoekstra and
Peter F. Patel{-}Schneider},
title = {{SQWRL:} {A} Query Language for {OWL}},
booktitle = {Proceedings of the 5th International Workshop on {OWL:} Experiences
and Directions {(OWLED} 2009), Chantilly, VA, United States, October
23-24, 2009},
series = {{CEUR} Workshop Proceedings},
volume = {529},
publisher = {CEUR-WS.org},
year = {2009},
url = {https://ceur-ws.org/Vol-529/owled2009\_submission\_42.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/semweb/OConnorD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/BuckeridgeOTONM08,
author = {David L. Buckeridge and
Anna Okhmatovskaia and
Samson W. Tu and
Martin J. O'Connor and
Csongor Nyulas and
Mark A. Musen},
title = {Model Formulation: Understanding Detection Performance in Public Health
Surveillance: Modeling Aberrancy-detection Algorithms},
journal = {J. Am. Medical Informatics Assoc.},
volume = {15},
number = {6},
pages = {760--769},
year = {2008},
url = {https://doi.org/10.1197/jamia.M2799},
doi = {10.1197/JAMIA.M2799},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/BuckeridgeOTONM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaiss/OConnorSNTD08,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Csongor Nyulas and
Samson W. Tu and
Amar K. Das},
title = {Developing a Web-Based Application using {OWL} and {SWRL}},
booktitle = {{AI} Meets Business Rules and Process Management, Papers from the
2008 {AAAI} Spring Symposium, Technical Report SS-08-01, Stanford,
California, USA, March 26-28, 2008},
pages = {93--98},
publisher = {{AAAI}},
year = {2008},
url = {http://www.aaai.org/Library/Symposia/Spring/2008/ss08-01-012.php},
timestamp = {Fri, 17 Feb 2012 14:16:56 +0100},
biburl = {https://dblp.org/rec/conf/aaaiss/OConnorSNTD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaiss/ShankarOPD08,
author = {Ravi D. Shankar and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
title = {Semantic Integration of Software Systems in Translational Clinical
Trials},
booktitle = {Semantic Scientific Knowledge Integration, Papers from the 2008 {AAAI}
Spring Symposium, Technical Report SS-08-05, Stanford, California,
USA, March 26-28, 2008},
pages = {105--108},
publisher = {{AAAI}},
year = {2008},
url = {http://www.aaai.org/Library/Symposia/Spring/2008/ss08-05-021.php},
timestamp = {Fri, 17 Feb 2012 16:44:19 +0100},
biburl = {https://dblp.org/rec/conf/aaaiss/ShankarOPD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BuckeridgeOTONM08,
author = {David L. Buckeridge and
Anna Okhmatovskaia and
Samson W. Tu and
Martin J. O'Connor and
Csongor Nyulas and
Mark A. Musen},
title = {Predicting Outbreak Detection in Public Health Surveillance: Quantitative
Analysis to Enable Evidence-Based Method Selection},
booktitle = {{AMIA} 2008, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 8-12, 2008},
publisher = {{AMIA}},
year = {2008},
url = {https://knowledge.amia.org/amia-55142-a2008a-1.625176/t-001-1.626020/f-001-1.626021/a-015-1.626486/a-016-1.626483},
timestamp = {Wed, 17 Apr 2024 11:48:12 +0200},
biburl = {https://dblp.org/rec/conf/amia/BuckeridgeOTONM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/TuTOSD08,
author = {Samson W. Tu and
Lakshika Tennakoon and
Martin J. O'Connor and
Ravi D. Shankar and
Amar K. Das},
title = {Using an Integrated Ontology and Information Model for Querying and
Reasoning about Phenotypes: The Case of Autism},
booktitle = {{AMIA} 2008, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 8-12, 2008},
publisher = {{AMIA}},
year = {2008},
url = {https://knowledge.amia.org/amia-55142-a2008a-1.625176/t-001-1.626020/f-001-1.626021/a-150-1.626113/a-151-1.626110},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/TuTOSD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ShankarMOD08,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
Amar K. Das},
editor = {Lu{\'{\i}}s Azevedo and
Ana Rita Londral},
title = {An Ontological Approach to Representing and Reasoning with Temporal
Constraints in Clinical Trial Protocols},
booktitle = {Proceedings of the First International Conference on Health Informatics,
{HEALTHINF} 2008, Funchal, Madeira, Portugal, January 28-31, 2008,
Volume 1},
pages = {87--93},
publisher = {{INSTICC} - Institute for Systems and Technologies of Information,
Control and Communication},
year = {2008},
timestamp = {Thu, 10 Apr 2008 15:34:45 +0200},
biburl = {https://dblp.org/rec/conf/biostec/ShankarMOD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/biostec/ShankarMOPD08,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
editor = {Ana L. N. Fred and
Joaquim Filipe and
Hugo Gamboa},
title = {Representing and Reasoning with Temporal Constraints in Clinical Trials
Using Semantic Technologies},
booktitle = {Biomedical Engineering Systems and Technologies, International Joint
Conference, {BIOSTEC} 2008, Funchal, Madeira, Portugal, January 28-31,
2008, Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {25},
pages = {520--530},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-92219-3\_39},
doi = {10.1007/978-3-540-92219-3\_39},
timestamp = {Tue, 16 Aug 2022 23:04:32 +0200},
biburl = {https://dblp.org/rec/conf/biostec/ShankarMOPD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iat/NyulasOTBOM08,
author = {Csongor Nyulas and
Martin J. O'Connor and
Samson W. Tu and
David L. Buckeridge and
Anna Okhmatovskaia and
Mark A. Musen},
title = {An Ontology-Driven Framework for Deploying {JADE} Agent Systems},
booktitle = {Proceedings of the 2008 {IEEE/WIC/ACM} International Conference on
Intelligent Agent Technology, Sydney, NSW, Australia, December 9-12,
2008},
pages = {573--577},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/WIIAT.2008.25},
doi = {10.1109/WIIAT.2008.25},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iat/NyulasOTBOM08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/owled/OConnorSMDN08,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Mark A. Musen and
Amar K. Das and
Csongor Nyulas},
editor = {Catherine Dolbear and
Alan Ruttenberg and
Ulrike Sattler},
title = {The {SWRLAPI:} {A} Development Environment for Working with {SWRL}
Rules},
booktitle = {Proceedings of the Fifth {OWLED} Workshop on {OWL:} Experiences and
Directions, collocated with the 7th International Semantic Web Conference
(ISWC-2008), Karlsruhe, Germany, October 26-27, 2008},
series = {{CEUR} Workshop Proceedings},
volume = {432},
publisher = {CEUR-WS.org},
year = {2008},
url = {https://ceur-ws.org/Vol-432/owled2008eu\_submission\_41.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:02 +0100},
biburl = {https://dblp.org/rec/conf/owled/OConnorSMDN08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aime/OConnorSTNPMD07,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Samson W. Tu and
Csongor Nyulas and
Dave Parrish and
Mark A. Musen and
Amar K. Das},
editor = {Riccardo Bellazzi and
Ameen Abu{-}Hanna and
Jim Hunter},
title = {Using Semantic Web Technologies for Knowledge-Driven Querying of Biomedical
Data},
booktitle = {Artificial Intelligence in Medicine, 11th Conference on Artificial
Intelligence in Medicine, {AIME} 2007, Amsterdam, The Netherlands,
July 7-11, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4594},
pages = {267--276},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-73599-1\_36},
doi = {10.1007/978-3-540-73599-1\_36},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/aime/OConnorSTNPMD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RajOD07,
author = {Rashmi Raj and
Martin J. O'Connor and
Amar K. Das},
title = {An Ontology-Driven Method for Hierarchical Mining of Temporal Patterns:
Application to {HIV} Drug Resistance Research},
booktitle = {{AMIA} 2007, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 10-14, 2007},
publisher = {{AMIA}},
year = {2007},
url = {https://knowledge.amia.org/amia-55142-a2007a-1.623841/t-001-1.624626/f-001-1.624627/a-117-1.624777/a-118-1.624774},
timestamp = {Wed, 17 Apr 2024 11:48:14 +0200},
biburl = {https://dblp.org/rec/conf/amia/RajOD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ShankarMOPD07,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
title = {An Ontology-based Architecture for Integration of Clinical Trials
Management Applications},
booktitle = {{AMIA} 2007, American Medical Informatics Association Annual Symposium,
Chicago, IL, USA, November 10-14, 2007},
publisher = {{AMIA}},
year = {2007},
url = {https://knowledge.amia.org/amia-55142-a2007a-1.623841/t-001-1.624626/f-001-1.624627/a-127-1.624747/a-128-1.624744},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/ShankarMOPD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/OConnorSPD07,
author = {Martin J. O'Connor and
Ravi D. Shankar and
David B. Parrish and
Amar K. Das},
editor = {Klaus A. Kuhn and
James R. Warren and
Tze{-}Yun Leong},
title = {Knowledge-Level Querying of Temporal Patterns in Clinical Research
Systems},
booktitle = {{MEDINFO} 2007 - Proceedings of the 12th World Congress on Health
(Medical) Informatics - Building Sustainable Health Systems, 20-24
August, 2007, Brisbane, Australia},
series = {Studies in Health Technology and Informatics},
volume = {129},
pages = {311--315},
publisher = {{IOS} Press},
year = {2007},
url = {https://doi.org/10.3233/978-1-58603-774-1-311},
doi = {10.3233/978-1-58603-774-1-311},
timestamp = {Mon, 22 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/medinfo/OConnorSPD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/rr/OConnorSTNDM07,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Samson W. Tu and
Csongor Nyulas and
Amar K. Das and
Mark A. Musen},
editor = {Massimo Marchiori and
Jeff Z. Pan and
Christian de Sainte Marie},
title = {Efficiently Querying Relational Databases Using {OWL} and {SWRL}},
booktitle = {Web Reasoning and Rule Systems, First International Conference, {RR}
2007, Innsbruck , Austria, June 7-8, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4524},
pages = {361--363},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-72982-2\_31},
doi = {10.1007/978-3-540-72982-2\_31},
timestamp = {Tue, 14 May 2019 10:00:55 +0200},
biburl = {https://dblp.org/rec/conf/rr/OConnorSTNDM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ruleml/OConnorTNDM07,
author = {Martin J. O'Connor and
Samson W. Tu and
Csongor Nyulas and
Amar K. Das and
Mark A. Musen},
editor = {Adrian Paschke and
Yevgen Biletskiy},
title = {Querying the Semantic Web with {SWRL}},
booktitle = {Advances in Rule Interchange and Applications, International Symposium,
RuleML 2007, Orlando, Florida, USA, October 25-26, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4824},
pages = {155--159},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-75975-1\_13},
doi = {10.1007/978-3-540-75975-1\_13},
timestamp = {Tue, 14 May 2019 10:00:39 +0200},
biburl = {https://dblp.org/rec/conf/ruleml/OConnorTNDM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/ChauhanOD06,
author = {Vijay P. Chauhan and
Martin J. O'Connor and
Amar K. Das},
title = {A Dynamic Distributed Architecture for Temporal Data Abstraction},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-208-1.623119/a-209-1.623116},
timestamp = {Wed, 17 Apr 2024 11:48:16 +0200},
biburl = {https://dblp.org/rec/conf/amia/ChauhanOD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/NarayananOD06,
author = {Preetha S. Narayanan and
Martin J. O'Connor and
Amar K. Das},
title = {Ontology-Driven Mapping of Temporal Data in Biomedical Databases},
booktitle = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 11-15, 2006},
publisher = {{AMIA}},
year = {2006},
url = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-373-1.622621/a-374-1.622618},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/NarayananOD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/OConnorSD06,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Amar K. Das},
title = {An Ontology-Driven Mediator for Querying Time-Oriented Biomedical
Data},
booktitle = {19th {IEEE} International Symposium on Computer-Based Medical Systems
{(CBMS} 2006), 22-23 June 2006, Salt Lake City, Utah, {USA}},
pages = {264--269},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/CBMS.2006.41},
doi = {10.1109/CBMS.2006.41},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/OConnorSD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/ShankarMOPD06,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
title = {Knowledge-Based System for Managing Complex Clinical Trials},
booktitle = {19th {IEEE} International Symposium on Computer-Based Medical Systems
{(CBMS} 2006), 22-23 June 2006, Salt Lake City, Utah, {USA}},
pages = {270--278},
publisher = {{IEEE} Computer Society},
year = {2006},
url = {https://doi.org/10.1109/CBMS.2006.107},
doi = {10.1109/CBMS.2006.107},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cbms/ShankarMOPD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hikm/ShankarMOPD06,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
editor = {Li Xiong and
Yuni Xia},
title = {Epoch: an ontological framework to support clinical trials management},
booktitle = {Proceedings of the International Workshop on Healthcare Information
and Knowledge Management, {HIKM} 2006, Arlington, Virginia, USA, November
11, 2006},
pages = {25--32},
publisher = {{ACM}},
year = {2006},
url = {https://doi.org/10.1145/1183568.1183574},
doi = {10.1145/1183568.1183574},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hikm/ShankarMOPD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/ShankarMOPD06,
author = {Ravi D. Shankar and
Susana B. Martins and
Martin J. O'Connor and
David B. Parrish and
Amar K. Das},
editor = {Isabel F. Cruz and
Stefan Decker and
Dean Allemang and
Chris Preist and
Daniel Schwabe and
Peter Mika and
Michael Uschold and
Lora Aroyo},
title = {Towards Semantic Interoperability in a Clinical Trials Management
System},
booktitle = {The Semantic Web - {ISWC} 2006, 5th International Semantic Web Conference,
{ISWC} 2006, Athens, GA, USA, November 5-9, 2006, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4273},
pages = {901--912},
publisher = {Springer},
year = {2006},
url = {https://doi.org/10.1007/11926078\_65},
doi = {10.1007/11926078\_65},
timestamp = {Tue, 07 Sep 2021 13:48:11 +0200},
biburl = {https://dblp.org/rec/conf/semweb/ShankarMOPD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/expert/CrubezyOBPM05,
author = {Monica Crub{\'{e}}zy and
Martin J. O'Connor and
David L. Buckeridge and
Zachary Pincus and
Mark A. Musen},
title = {Ontology-Centered Syndromic Surveillance for Bioterrorism},
journal = {{IEEE} Intell. Syst.},
volume = {20},
number = {5},
pages = {26--35},
year = {2005},
url = {https://doi.org/10.1109/MIS.2005.91},
doi = {10.1109/MIS.2005.91},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/expert/CrubezyOBPM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaaiss/MusenCOB05,
author = {Mark A. Musen and
Monica Crub{\'{e}}zy and
Martin J. O'Connor and
David L. Buckeridge},
title = {Knowledge-Based Syndromic Surveillance for Bioterrorism},
booktitle = {{AI} Technologies for Homeland Security, Papers from the 2005 {AAAI}
Spring Symposium, Technical Report SS-05-01, Stanford, California,
USA, March 21-23, 2005},
pages = {86--90},
publisher = {{AAAI}},
year = {2005},
url = {http://www.aaai.org/Library/Symposia/Spring/2005/ss05-01-013.php},
timestamp = {Sat, 18 Feb 2012 12:25:28 +0100},
biburl = {https://dblp.org/rec/conf/aaaiss/MusenCOB05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/RafiqOD05,
author = {Mohammed I. Rafiq and
Martin J. O'Connor and
Amar K. Das},
title = {Computational Method for Temporal Pattern Discovery in Biomedical
Genomic Databases},
booktitle = {Fourth International {IEEE} Computer Society Computational Systems
Bioinformatics Conference, {CSB} 2005, Stanford, CA, USA, August 8-11,
2005},
pages = {362--365},
publisher = {{IEEE} Computer Society},
year = {2005},
url = {https://doi.org/10.1109/CSB.2005.25},
doi = {10.1109/CSB.2005.25},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/csb/RafiqOD05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/OConnorKTGDGM05,
author = {Martin J. O'Connor and
Holger Knublauch and
Samson W. Tu and
Benjamin N. Grosof and
Mike Dean and
William E. Grosso and
Mark A. Musen},
editor = {Yolanda Gil and
Enrico Motta and
V. Richard Benjamins and
Mark A. Musen},
title = {Supporting Rule System Interoperability on the Semantic Web with {SWRL}},
booktitle = {The Semantic Web - {ISWC} 2005, 4th International Semantic Web Conference,
{ISWC} 2005, Galway, Ireland, November 6-10, 2005, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {3729},
pages = {974--986},
publisher = {Springer},
year = {2005},
url = {https://doi.org/10.1007/11574620\_69},
doi = {10.1007/11574620\_69},
timestamp = {Tue, 07 Sep 2021 13:47:46 +0200},
biburl = {https://dblp.org/rec/conf/semweb/OConnorKTGDGM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/GoldsteinCTSOMMLSOAGH04,
author = {Mary K. Goldstein and
Robert W. Coleman and
Samson W. Tu and
Ravi D. Shankar and
Martin J. O'Connor and
Mark A. Musen and
Susana B. Martins and
Philip W. Lavori and
Michael G. Shlipak and
Eugene Oddone and
Aneel A. Advani and
Parisa Gholami and
Brian B. Hoffman},
title = {Application of Information Technology: Translating Research into Practice:
Organizational Issues in Implementing Automated Decision Support for
Hypertension in Three Medical Centers},
journal = {J. Am. Medical Informatics Assoc.},
volume = {11},
number = {5},
pages = {368--376},
year = {2004},
url = {https://doi.org/10.1197/jamia.M1534},
doi = {10.1197/JAMIA.M1534},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/GoldsteinCTSOMMLSOAGH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ike/BuckeridgeOXM04,
author = {David L. Buckeridge and
Martin J. O'Connor and
Haobo Xu and
Mark A. Musen},
editor = {Hamid R. Arabnia},
title = {A Knowledge-Based Framework for Deploying Surveillance Problem Solvers},
booktitle = {Proceedings of the International Conference on Information and Knowledge
Engineering. IKE'04, June 21-24, 2004, Las Vegas, Nevada, {USA}},
pages = {28--32},
publisher = {{CSREA} Press},
year = {2004},
timestamp = {Mon, 22 Nov 2004 13:20:31 +0100},
biburl = {https://dblp.org/rec/conf/ike/BuckeridgeOXM04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorBCCPM03,
author = {Martin J. O'Connor and
David L. Buckeridge and
Michael Choy and
Monica Crub{\'{e}}zy and
Zachary Pincus and
Mark A. Musen},
title = {BioSTORM: {A} System for Automated Surveillance of Diverse Data Sources},
booktitle = {{AMIA} 2003, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 8-12, 2003},
publisher = {{AMIA}},
year = {2003},
url = {https://knowledge.amia.org/amia-55142-a2003a-1.616734/t-003-1.618691/f-001-1.618692/a-453-1.618721/a-454-1.618718},
timestamp = {Wed, 17 Apr 2024 11:48:28 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorBCCPM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/GoldsteinHCTSOMAM02,
author = {Mary K. Goldstein and
Brian B. Hoffman and
Robert W. Coleman and
Samson W. Tu and
Ravi D. Shankar and
Martin J. O'Connor and
Susana B. Martins and
Aneel A. Advani and
Mark A. Musen},
title = {Patient Safety in Guideline-Based Decision Support for Hypertension
Management: {ATHENA} {DSS}},
journal = {J. Am. Medical Informatics Assoc.},
volume = {9},
number = {Supplement},
pages = {11--16},
year = {2002},
url = {https://doi.org/10.1197/jamia.M1218},
doi = {10.1197/JAMIA.M1218},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/GoldsteinHCTSOMAM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BuckeridgeGOCTM02,
author = {David L. Buckeridge and
Justin Graham and
Martin J. O'Connor and
Michael Choy and
Samson W. Tu and
Mark A. Musen},
title = {Knowledge-based bioterrorism surveillance},
booktitle = {{AMIA} 2002, American Medical Informatics Association Annual Symposium,
San Antonio, TX, USA, November 9-13, 2002},
publisher = {{AMIA}},
year = {2002},
url = {https://knowledge.amia.org/amia-55142-a2002a-1.610020/t-001-1.612667/f-001-1.612668/a-015-1.613208/a-016-1.613205},
timestamp = {Wed, 17 Apr 2024 11:48:33 +0200},
biburl = {https://dblp.org/rec/conf/amia/BuckeridgeGOCTM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorTM02,
author = {Martin J. O'Connor and
Samson W. Tu and
Mark A. Musen},
title = {The Chronus {II} temporal database mediator},
booktitle = {{AMIA} 2002, American Medical Informatics Association Annual Symposium,
San Antonio, TX, USA, November 9-13, 2002},
publisher = {{AMIA}},
year = {2002},
url = {https://knowledge.amia.org/amia-55142-a2002a-1.610020/t-001-1.612667/f-001-1.612668/a-114-1.612906/a-115-1.612903},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorTM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/GoldsteinHCTSOMAM01,
author = {Mary K. Goldstein and
Brian B. Hoffman and
Robert W. Coleman and
Samson W. Tu and
Ravi D. Shankar and
Martin J. O'Connor and
Susana B. Martins and
Aneel A. Advani and
Mark A. Musen},
title = {Patient safety in guideline-based decision support for hypertension
management: {ATHENA} {DSS}},
booktitle = {{AMIA} 2001, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 3-7, 2001},
publisher = {{AMIA}},
year = {2001},
url = {https://knowledge.amia.org/amia-55142-a2001a-1.597057/t-001-1.599654/f-001-1.599655/a-043-1.600008/a-044-1.600005},
timestamp = {Wed, 17 Apr 2024 11:48:39 +0200},
biburl = {https://dblp.org/rec/conf/amia/GoldsteinHCTSOMAM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorSTAGCM01,
author = {Martin J. O'Connor and
Ravi D. Shankar and
Samson W. Tu and
Aneel A. Advani and
Mary K. Goldstein and
Robert W. Coleman and
Mark A. Musen},
title = {A Client-Server Framework for Deploying a Decision-support System
in a Resource-constrained Environment},
booktitle = {{AMIA} 2001, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 3-7, 2001},
publisher = {{AMIA}},
year = {2001},
url = {https://knowledge.amia.org/amia-55142-a2001a-1.597057/t-002-1.598852/f-001-1.598853/a-343-1.599106/a-344-1.599103},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorSTAGCM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/OConnorGTM01,
author = {Martin J. O'Connor and
William E. Grosso and
Samson W. Tu and
Mark A. Musen},
editor = {Vimla L. Patel and
Ray Rogers and
Reinhold Haux},
title = {{RASTA:} {A} Distributed Temporal Abstraction System to Facilitate
Knowledge-Driven Monitoring of Clinical Databases},
booktitle = {{MEDINFO} 2001 - Proceedings of the 10th World Congress on Medical
Informatics, September 2-5, 2001, London, {UK}},
series = {Studies in Health Technology and Informatics},
volume = {84},
pages = {508--512},
publisher = {{IOS} Press},
year = {2001},
url = {https://doi.org/10.3233/978-1-60750-928-8-508},
doi = {10.3233/978-1-60750-928-8-508},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/medinfo/OConnorGTM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/GoldsteinHCMTASO00,
author = {Mary K. Goldstein and
Brian B. Hoffman and
Robert W. Coleman and
Mark A. Musen and
Samson W. Tu and
Aneel A. Advani and
Ravi D. Shankar and
Martin J. O'Connor},
title = {Implementing clinical practice guidelines while taking account of
changing evidence: {ATHENA} DSS, an easily modifiable decision-support
system for managing hypertension in primary care},
booktitle = {{AMIA} 2000, American Medical Informatics Association Annual Symposium,
Los Angeles, CA, USA, November 4-8, 2000},
publisher = {{AMIA}},
year = {2000},
url = {https://knowledge.amia.org/amia-55142-a2000a-1.606968/t-001-1.609408/f-001-1.609409/a-060-1.609797/a-061-1.609794},
timestamp = {Wed, 17 Apr 2024 11:48:44 +0200},
biburl = {https://dblp.org/rec/conf/amia/GoldsteinHCMTASO00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorTM00,
author = {Martin J. O'Connor and
Samson W. Tu and
Mark A. Musen},
title = {Representation of temporal indeterminacy in clinical databases},
booktitle = {{AMIA} 2000, American Medical Informatics Association Annual Symposium,
Los Angeles, CA, USA, November 4-8, 2000},
publisher = {{AMIA}},
year = {2000},
url = {https://knowledge.amia.org/amia-55142-a2000a-1.606968/t-001-1.609408/f-001-1.609409/a-124-1.609605/a-125-1.609602},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorTM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AdvaniTOCGM99,
author = {Aneel A. Advani and
Samson W. Tu and
Martin J. O'Connor and
Robert W. Coleman and
Mary K. Goldstein and
Mark A. Musen},
title = {Integrating a modern knowledge-based system architecture with a legacy
{VA} database: the {ATHENA} and {EON} projects at Stanford},
booktitle = {{AMIA} 1999, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 6-10, 1999},
publisher = {{AMIA}},
year = {1999},
url = {https://knowledge.amia.org/amia-55142-a1999a-1.591078/t-001-1.593353/f-001-1.593354/a-131-1.593574/a-132-1.593571},
timestamp = {Wed, 17 Apr 2024 11:48:49 +0200},
biburl = {https://dblp.org/rec/conf/amia/AdvaniTOCGM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MusenTSOA99,
author = {Mark A. Musen and
Samson W. Tu and
Ravi D. Shankar and
Martin J. O'Connor and
Aneel A. Advani},
title = {{EON} 2.0: Enhanced Middleware for Automation of Protocol-Directed
Therapy},
booktitle = {{AMIA} 1999, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 6-10, 1999},
publisher = {{AMIA}},
year = {1999},
url = {https://knowledge.amia.org/amia-55142-a1999a-1.591078/t-003-1.592723/f-001-1.592724/a-408-1.592731/a-409-1.592728},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/MusenTSOA99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/OConnorTM99,
author = {Martin J. O'Connor and
Samson W. Tu and
Mark A. Musen},
title = {Applying temporal joins to clinical databases},
booktitle = {{AMIA} 1999, American Medical Informatics Association Annual Symposium,
Washington, DC, USA, November 6-10, 1999},
publisher = {{AMIA}},
year = {1999},
url = {https://knowledge.amia.org/amia-55142-a1999a-1.591078/t-001-1.593353/f-001-1.593354/a-067-1.593766/a-068-1.593763},
timestamp = {Wed, 17 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/amia/OConnorTM99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dse/OConnorTCH94,
author = {Martin J. O'Connor and
Brendan Tangney and
Vinny Cahill and
Neville Harris},
title = {Micro-kernel support for migration},
journal = {Distributed Syst. Eng.},
volume = {1},
number = {4},
pages = {212--223},
year = {1994},
url = {https://doi.org/10.1088/0967-1846/1/4/003},
doi = {10.1088/0967-1846/1/4/003},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/dse/OConnorTCH94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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