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BibTeX records: Marc Modat
@article{DBLP:journals/mia/DorentKIBRJGCMB23, author = {Reuben Dorent and Aaron Kujawa and Marina Ivory and Spyridon Bakas and Nicola Rieke and Samuel Joutard and Ben Glocker and M. Jorge Cardoso and Marc Modat and Kayhan Batmanghelich and Arseniy Belkov and Maria G. Baldeon Calisto and Jae Won Choi and Benoit M. Dawant and Hexin Dong and Sergio Escalera and Yubo Fan and Lasse Hansen and Mattias P. Heinrich and Smriti Joshi and Victoriya Kashtanova and Hyeongyu Kim and Satoshi Kondo and Christian N. Kruse and Susana K. Lai{-}Yuen and Hao Li and Han Liu and Buntheng Ly and Ipek Oguz and Hyungseob Shin and Boris Shirokikh and Zixian Su and Guotai Wang and Jianghao Wu and Yanwu Xu and Kai Yao and Li Zhang and S{\'{e}}bastien Ourselin and Jonathan Shapey and Tom Vercauteren}, title = {CrossMoDA 2021 challenge: Benchmark of cross-modality domain adaptation techniques for vestibular schwannoma and cochlea segmentation}, journal = {Medical Image Anal.}, volume = {83}, pages = {102628}, year = {2023}, url = {https://doi.org/10.1016/j.media.2022.102628}, doi = {10.1016/J.MEDIA.2022.102628}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/DorentKIBRJGCMB23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/HeringHMCSHLKHSVRSEVHHYBBJMLRLLJVFR23, author = {Alessa Hering and Lasse Hansen and Tony C. W. Mok and Albert C. S. Chung and Hanna Siebert and Stephanie H{\"{a}}ger and Annkristin Lange and Sven Kuckertz and Stefan Heldmann and Wei Shao and Sulaiman Vesal and Mirabela Rusu and Geoffrey A. Sonn and Th{\'{e}}o Estienne and Maria Vakalopoulou and Luyi Han and Yunzhi Huang and Pew{-}Thian Yap and Mikael Brudfors and Ya{\"{e}}l Balbastre and Samuel Joutard and Marc Modat and Gal Lifshitz and Dan Raviv and Jinxin Lv and Qiang Li and Vincent Jaouen and Dimitris Visvikis and Constance Fourcade and Mathieu Rubeaux and Wentao Pan and Zhe Xu and Bailiang Jian and Francesca De Benetti and Marek Wodzinski and Niklas Gunnarsson and Jens Sj{\"{o}}lund and Daniel Grzech and Huaqi Qiu and Zeju Li and Alexander Thorley and Jinming Duan and Christoph Gro{\ss}br{\"{o}}hmer and Andrew Hoopes and Ingerid Reinertsen and Yiming Xiao and Bennett A. Landman and Yuankai Huo and Keelin Murphy and Nikolas Lessmann and Bram van Ginneken and Adrian V. Dalca and Mattias P. Heinrich}, title = {Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning}, journal = {{IEEE} Trans. Medical Imaging}, volume = {42}, number = {3}, pages = {697--712}, year = {2023}, url = {https://doi.org/10.1109/TMI.2022.3213983}, doi = {10.1109/TMI.2022.3213983}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tmi/HeringHMCSHLKHSVRSEVHHYBBJMLRLLJVFR23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2307-15208, author = {Walter H. L. Pinaya and Mark S. Graham and Eric Kerfoot and Petru{-}Daniel Tudosiu and Jessica Dafflon and Virginia Fernandez and Pedro Sanchez and Julia Wolleb and Pedro F. Da Costa and Ashay Patel and Hyungjin Chung and Can Zhao and Wei Peng and Zelong Liu and XueYan Mei and Oeslle Lucena and Jong Chul Ye and Sotirios A. Tsaftaris and Prerna Dogra and Andrew Feng and Marc Modat and Parashkev Nachev and S{\'{e}}bastien Ourselin and M. Jorge Cardoso}, title = {Generative {AI} for Medical Imaging: extending the {MONAI} Framework}, journal = {CoRR}, volume = {abs/2307.15208}, year = {2023}, url = {https://doi.org/10.48550/arXiv.2307.15208}, doi = {10.48550/ARXIV.2307.15208}, eprinttype = {arXiv}, eprint = {2307.15208}, timestamp = {Tue, 01 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2307-15208.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/CasamitjanaLFPM22, author = {Adri{\`{a}} Casamitjana and Marco Lorenzi and Sebastiano Ferraris and Lo{\"{\i}}c Peter and Marc Modat and Allison Stevens and Bruce Fischl and Tom Vercauteren and Juan Eugenio Iglesias}, title = {Robust joint registration of multiple stains and {MRI} for multimodal 3D histology reconstruction: Application to the Allen human brain atlas}, journal = {Medical Image Anal.}, volume = {75}, pages = {102265}, year = {2022}, url = {https://doi.org/10.1016/j.media.2021.102265}, doi = {10.1016/J.MEDIA.2021.102265}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/mia/CasamitjanaLFPM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/GrigorescuUCCHB22, author = {Irina Grigorescu and Alena Uus and Daan Christiaens and Lucilio Cordero{-}Grande and Jana Hutter and Dafnis Batalle and A. David Edwards and Joseph V. Hajnal and Marc Modat and Maria Deprez}, editor = {Roxane Licandro and Andrew Melbourne and Esra Abaci Turk and Christopher K. Macgowan and Jana Hutter}, title = {Attention-Driven Multi-channel Deformable Registration of Structural and Microstructural Neonatal Data}, booktitle = {Perinatal, Preterm and Paediatric Image Analysis - 7th International Workshop, {PIPPI} 2022, Held in Conjunction with {MICCAI} 2022, Singapore, September 18, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13575}, pages = {71--81}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-17117-8\_7}, doi = {10.1007/978-3-031-17117-8\_7}, timestamp = {Tue, 27 Sep 2022 21:07:01 +0200}, biburl = {https://dblp.org/rec/conf/miccai/GrigorescuUCCHB22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/JoutardDOVM22, author = {Samuel Joutard and Reuben Dorent and S{\'{e}}bastien Ourselin and Tom Vercauteren and Marc Modat}, editor = {Chunfeng Lian and Xiaohuan Cao and Islem Rekik and Xuanang Xu and Zhiming Cui}, title = {Driving Points Prediction for Abdominal Probabilistic Registration}, booktitle = {Machine Learning in Medical Imaging - 13th International Workshop, {MLMI} 2022, Held in Conjunction with {MICCAI} 2022, Singapore, September 18, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13583}, pages = {288--297}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-21014-3\_30}, doi = {10.1007/978-3-031-21014-3\_30}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/JoutardDOVM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/JoutardDVM22, author = {Samuel Joutard and Reuben Dorent and Tom Vercauteren and Marc Modat}, editor = {Olivier Colliot and Ivana Isgum and Bennett A. Landman and Murray H. Loew}, title = {A Pareto front based methodology to better assess medical image registration algorithms}, booktitle = {Medical Imaging 2022: Image Processing, San Diego, CA, USA, February 20-24, 2022 / Online, March 21-27, 2022}, series = {{SPIE} Proceedings}, volume = {12032}, publisher = {{SPIE}}, year = {2022}, url = {https://doi.org/10.1117/12.2611081}, doi = {10.1117/12.2611081}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/JoutardDVM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wbir/JoutardPAWDPVMM22, author = {Samuel Joutard and Thomas S. Pheiffer and Chlo{\'{e}} Audigier and Patrick Wohlfahrt and Reuben Dorent and Sebastien Piat and Tom Vercauteren and Marc Modat and Tommaso Mansi}, editor = {Alessa Hering and Julia A. Schnabel and Miaomiao Zhang and Enzo Ferrante and Mattias P. Heinrich and Daniel Rueckert}, title = {A Multi-organ Point Cloud Registration Algorithm for Abdominal {CT} Registration}, booktitle = {Biomedical Image Registration - 10th International Workshop, {WBIR} 2022, Munich, Germany, July 10-12, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13386}, pages = {75--84}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-11203-4\_9}, doi = {10.1007/978-3-031-11203-4\_9}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wbir/JoutardPAWDPVMM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2201-02831, author = {Reuben Dorent and Aaron Kujawa and Marina Ivory and Spyridon Bakas and Nicola Rieke and Samuel Joutard and Ben Glocker and Jorge Cardoso and Marc Modat and Kayhan Batmanghelich and Arseniy Belkov and Maria G. Baldeon Calisto and Jae Won Choi and Benoit M. Dawant and Hexin Dong and Sergio Escalera and Yubo Fan and Lasse Hansen and Mattias P. Heinrich and Smriti Joshi and Victoriya Kashtanova and Hyeongyu Kim and Satoshi Kondo and Christian N. Kruse and Susana K. Lai{-}Yuen and Hao Li and Han Liu and Buntheng Ly and Ipek Oguz and Hyungseob Shin and Boris Shirokikh and Zixian Su and Guotai Wang and Jianghao Wu and Yanwu Xu and Kai Yao and Li Zhang and S{\'{e}}bastien Ourselin and Jonathan Shapey and Tom Vercauteren}, title = {CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwnannoma and Cochlea Segmentation}, journal = {CoRR}, volume = {abs/2201.02831}, year = {2022}, url = {https://arxiv.org/abs/2201.02831}, eprinttype = {arXiv}, eprint = {2201.02831}, timestamp = {Thu, 27 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2201-02831.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2202-11486, author = {Mauricio Orbes{-}Arteaga and Thomas Varsavsky and Lauge S{\o}rensen and Mads Nielsen and Akshay Pai and S{\'{e}}bastien Ourselin and Marc Modat and M. Jorge Cardoso}, title = {Augmentation based unsupervised domain adaptation}, journal = {CoRR}, volume = {abs/2202.11486}, year = {2022}, url = {https://arxiv.org/abs/2202.11486}, eprinttype = {arXiv}, eprint = {2202.11486}, timestamp = {Thu, 03 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2202-11486.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2203-08041, author = {Samuel Joutard and Thomas S. Pheiffer and Chlo{\'{e}} Audigier and Patrick Wohlfahrt and Reuben Dorent and Sebastien Piat and Tom Vercauteren and Marc Modat and Tommaso Mansi}, title = {A multi-organ point cloud registration algorithm for abdominal {CT} registration}, journal = {CoRR}, volume = {abs/2203.08041}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2203.08041}, doi = {10.48550/ARXIV.2203.08041}, eprinttype = {arXiv}, eprint = {2203.08041}, timestamp = {Mon, 28 Mar 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2203-08041.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2208-03232, author = {Samuel Joutard and Reuben Dorent and S{\'{e}}bastien Ourselin and Tom Vercauteren and Marc Modat}, title = {Driving Points Prediction For Abdominal Probabilistic Registration}, journal = {CoRR}, volume = {abs/2208.03232}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2208.03232}, doi = {10.48550/ARXIV.2208.03232}, eprinttype = {arXiv}, eprint = {2208.03232}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2208-03232.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2211-02701, author = {M. Jorge Cardoso and Wenqi Li and Richard Brown and Nic Ma and Eric Kerfoot and Yiheng Wang and Benjamin Murray and Andriy Myronenko and Can Zhao and Dong Yang and Vishwesh Nath and Yufan He and Ziyue Xu and Ali Hatamizadeh and Wentao Zhu and Yun Liu and Mingxin Zheng and Yucheng Tang and Isaac Yang and Michael Zephyr and Behrooz Hashemian and Sachidanand Alle and Mohammad Zalbagi Darestani and Charlie Budd and Marc Modat and Tom Vercauteren and Guotai Wang and Yiwen Li and Yipeng Hu and Yunguan Fu and Benjamin Gorman and Hans J. Johnson and Brad W. Genereaux and Barbaros S. Erdal and Vikash Gupta and Andres Diaz{-}Pinto and Andre Dourson and Lena Maier{-}Hein and Paul F. Jaeger and Michael Baumgartner and Jayashree Kalpathy{-}Cramer and Mona Flores and Justin S. Kirby and Lee A. D. Cooper and Holger R. Roth and Daguang Xu and David Bericat and Ralf Floca and S. Kevin Zhou and Haris Shuaib and Keyvan Farahani and Klaus H. Maier{-}Hein and Stephen R. Aylward and Prerna Dogra and S{\'{e}}bastien Ourselin and Andrew Feng}, title = {{MONAI:} An open-source framework for deep learning in healthcare}, journal = {CoRR}, volume = {abs/2211.02701}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2211.02701}, doi = {10.48550/ARXIV.2211.02701}, eprinttype = {arXiv}, eprint = {2211.02701}, timestamp = {Tue, 26 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2211-02701.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/Mehdipour-Ghazi21, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and Marc Modat and M. Jorge Cardoso and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {Robust parametric modeling of Alzheimer's disease progression}, journal = {NeuroImage}, volume = {225}, pages = {117460}, year = {2021}, url = {https://doi.org/10.1016/j.neuroimage.2020.117460}, doi = {10.1016/J.NEUROIMAGE.2020.117460}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/Mehdipour-Ghazi21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/MarkiewiczMACTV21, author = {Pawel J. Markiewicz and Julian C. Matthews and John Ashburner and David M. Cash and David L. Thomas and Enrico De Vita and Anna Barnes and M. Jorge Cardoso and Marc Modat and Richard Brown and Kris Thielemans and Casper O. da Costa{-}Luis and Isadora Lopes Alves and Juan Domingo Gispert and Mark E. Schmidt and Paul Marsden and Alexander Hammers and S{\'{e}}bastien Ourselin and Frederik Barkhof}, title = {Uncertainty analysis of {MR-PET} image registration for precision neuro-PET imaging}, journal = {NeuroImage}, volume = {232}, pages = {117821}, year = {2021}, url = {https://doi.org/10.1016/j.neuroimage.2021.117821}, doi = {10.1016/J.NEUROIMAGE.2021.117821}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/MarkiewiczMACTV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/GrigorescuUCCHB21, author = {Irina Grigorescu and Alena Uus and Daan Christiaens and Lucilio Cordero{-}Grande and Jana Hutter and Dafnis Batalle and A. David Edwards and Joseph V. Hajnal and Marc Modat and Maria Deprez}, editor = {Carole H. Sudre and Roxane Licandro and Christian F. Baumgartner and Andrew Melbourne and Adrian V. Dalca and Jana Hutter and Ryutaro Tanno and Esra Abaci Turk and Koen Van Leemput and Jordina Torrents{-}Barrena and William M. Wells III and Christopher K. Macgowan}, title = {Uncertainty-Aware Deep Learning Based Deformable Registration}, booktitle = {Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, and Perinatal Imaging, Placental and Preterm Image Analysis - 3rd International Workshop, {UNSURE} 2021, and 6th International Workshop, {PIPPI} 2021 Held in Conjunction with {MICCAI} 2021, Strasbourg, France, October 1, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12959}, pages = {54--63}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-87735-4\_6}, doi = {10.1007/978-3-030-87735-4\_6}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/GrigorescuUCCHB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/DorentJSKMOV21, author = {Reuben Dorent and Samuel Joutard and Jonathan Shapey and Aaron Kujawa and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, editor = {Marleen de Bruijne and Philippe C. Cattin and St{\'{e}}phane Cotin and Nicolas Padoy and Stefanie Speidel and Yefeng Zheng and Caroline Essert}, title = {Inter Extreme Points Geodesics for End-to-End Weakly Supervised Image Segmentation}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2021 - 24th International Conference, Strasbourg, France, September 27 - October 1, 2021, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {12902}, pages = {615--624}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-87196-3\_57}, doi = {10.1007/978-3-030-87196-3\_57}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/DorentJSKMOV21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/GroothuisSIBGSP21, author = {Irme Groothuis and Carole H. Sudre and Silvia Ingala and Josephine Barnes and Juan Domingo Gispert and Lauge S{\o}rensen and Akshay Pai and Mads Nielsen and S{\'{e}}bastien Ourselin and M. Jorge Cardoso and Frederik Barkhof and Marc Modat}, editor = {Ivana Isgum and Bennett A. Landman}, title = {Lesion-wise evaluation for effective performance monitoring of small object segmentation}, booktitle = {Medical Imaging 2021: Image Processing, Online, February 15-19, 2021}, series = {{SPIE} Proceedings}, volume = {11596}, publisher = {{SPIE}}, year = {2021}, url = {https://doi.org/10.1117/12.2580734}, doi = {10.1117/12.2580734}, timestamp = {Thu, 21 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/GroothuisSIBGSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2101-06440, author = {M. Jorge Cardoso and Marc Modat and Tom Vercauteren and S{\'{e}}bastien Ourselin}, title = {Scale factor point spread function matching: Beyond aliasing in image resampling}, journal = {CoRR}, volume = {abs/2101.06440}, year = {2021}, url = {https://arxiv.org/abs/2101.06440}, eprinttype = {arXiv}, eprint = {2101.06440}, timestamp = {Tue, 26 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2101-06440.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2103-13314, author = {Marta Bianca Maria Ranzini and Lucas Fidon and S{\'{e}}bastien Ourselin and Marc Modat and Tom Vercauteren}, title = {MONAIfbs: MONAI-based fetal brain {MRI} deep learning segmentation}, journal = {CoRR}, volume = {abs/2103.13314}, year = {2021}, url = {https://arxiv.org/abs/2103.13314}, eprinttype = {arXiv}, eprint = {2103.13314}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2103-13314.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2104-08072, author = {Thomas C. Booth and Bernice Akpinar and Andrei Roman and Haris Shuaib and Aysha Luis and Alysha Chelliah and Ayisha Al Busaidi and Ayesha Mirchandani and Burcu Alparslan and Nina Mansoor and Keyoumars Ashkan and S{\'{e}}bastien Ourselin and Marc Modat}, title = {Machine Learning and Glioblastoma: Treatment Response Monitoring Biomarkers in 2021}, journal = {CoRR}, volume = {abs/2104.08072}, year = {2021}, url = {https://arxiv.org/abs/2104.08072}, eprinttype = {arXiv}, eprint = {2104.08072}, timestamp = {Mon, 19 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2104-08072.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2104-14873, author = {Adri{\`{a}} Casamitjana and Marco Lorenzi and Sebastiano Ferraris and Lo{\"{\i}}c Peter and Marc Modat and Allison Stevens and Bruce Fischl and Tom Vercauteren and Juan Eugenio Iglesias}, title = {Robust joint registration of multiple stains and {MRI} for multimodal 3D histology reconstruction: Application to the Allen human brain atlas}, journal = {CoRR}, volume = {abs/2104.14873}, year = {2021}, url = {https://arxiv.org/abs/2104.14873}, eprinttype = {arXiv}, eprint = {2104.14873}, timestamp = {Thu, 05 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2104-14873.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2107-00583, author = {Reuben Dorent and Samuel Joutard and Jonathan Shapey and Aaron Kujawa and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, title = {Inter Extreme Points Geodesics for Weakly Supervised Segmentation}, journal = {CoRR}, volume = {abs/2107.00583}, year = {2021}, url = {https://arxiv.org/abs/2107.00583}, eprinttype = {arXiv}, eprint = {2107.00583}, timestamp = {Wed, 07 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2107-00583.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2112-04489, author = {Alessa Hering and Lasse Hansen and Tony C. W. Mok and Albert C. S. Chung and Hanna Siebert and Stephanie H{\"{a}}ger and Annkristin Lange and Sven Kuckertz and Stefan Heldmann and Wei Shao and Sulaiman Vesal and Mirabela Rusu and Geoffrey A. Sonn and Th{\'{e}}o Estienne and Maria Vakalopoulou and Luyi Han and Yunzhi Huang and Mikael Brudfors and Ya{\"{e}}l Balbastre and Samuel Joutard and Marc Modat and Gal Lifshitz and Dan Raviv and Jinxin Lv and Qiang Li and Vincent Jaouen and Dimitris Visvikis and Constance Fourcade and Mathieu Rubeaux and Wentao Pan and Zhe Xu and Bailiang Jian and Francesca De Benetti and Marek Wodzinski and Niklas Gunnarsson and Huaqi Qiu and Zeju Li and Christoph Gro{\ss}br{\"{o}}hmer and Andrew Hoopes and Ingerid Reinertsen and Yiming Xiao and Bennett A. Landman and Yuankai Huo and Keelin Murphy and Bram van Ginneken and Adrian V. Dalca and Mattias P. Heinrich}, title = {Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning}, journal = {CoRR}, volume = {abs/2112.04489}, year = {2021}, url = {https://arxiv.org/abs/2112.04489}, eprinttype = {arXiv}, eprint = {2112.04489}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2112-04489.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cmpb/RanziniHECIVOHM20, author = {Marta Bianca Maria Ranzini and Johann Henckel and Michael Ebner and M. Jorge Cardoso and Amanda Isaac and Tom Vercauteren and S{\'{e}}bastien Ourselin and Alister Hart and Marc Modat}, title = {Automated postoperative muscle assessment of hip arthroplasty patients using multimodal imaging joint segmentation}, journal = {Comput. Methods Programs Biomed.}, volume = {183}, year = {2020}, url = {https://doi.org/10.1016/j.cmpb.2019.105062}, doi = {10.1016/J.CMPB.2019.105062}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/cmpb/RanziniHECIVOHM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/MaCZMPWCSHSPLMS20, author = {Da Ma and Manuel Jorge Cardoso and Maria A. Zuluaga and Marc Modat and Nick M. Powell and Frances K. Wiseman and Jon O. Cleary and Benjamin Sinclair and Ian F. Harrison and Bernard Siow and Karteek Popuri and Sieun Lee and Joanne A. Matsubara and Marinko V. Sarunic and Mirza Faisal Beg and Victor L. J. Tybulewicz and Elizabeth M. C. Fisher and Mark F. Lythgoe and S{\'{e}}bastien Ourselin}, title = {Substantially thinner internal granular layer and reduced molecular layer surface in the cerebellar cortex of the Tc1 mouse model of down syndrome - a comprehensive morphometric analysis with active staining contrast-enhanced {MRI}}, journal = {NeuroImage}, volume = {223}, pages = {117271}, year = {2020}, url = {https://doi.org/10.1016/j.neuroimage.2020.117271}, doi = {10.1016/J.NEUROIMAGE.2020.117271}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/MaCZMPWCSHSPLMS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/XiaoMWSKDMRRCFM20, author = {Yiming Xiao and Andreas Maier and Wolfgang Wein and Roozbeh Shams and Samuel Kadoury and David Drobny and Marc Modat and Ingerid Reinertsen and Hassan Rivaz and Matthieu Chabanas and Maryse Fortin and In{\^{e}}s Machado and Yangming Ou and Mattias P. Heinrich and Julia A. Schnabel and Xia Zhong}, title = {Evaluation of {MRI} to Ultrasound Registration Methods for Brain Shift Correction: The CuRIOUS2018 Challenge}, journal = {{IEEE} Trans. Medical Imaging}, volume = {39}, number = {3}, pages = {777--786}, year = {2020}, url = {https://doi.org/10.1109/TMI.2019.2935060}, doi = {10.1109/TMI.2019.2935060}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tmi/XiaoMWSKDMRRCFM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/RanziniGKCHOHM20, author = {Marta Bianca Maria Ranzini and Irme Groothuis and Kerstin Kl{\"{a}}ser and M. Jorge Cardoso and Johann Henckel and S{\'{e}}bastien Ourselin and Alister Hart and Marc Modat}, title = {Combining Multimodal Information for Metal Artefact Reduction: An Unsupervised Deep Learning Framework}, booktitle = {17th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2020, Iowa City, IA, USA, April 3-7, 2020}, pages = {600--604}, publisher = {{IEEE}}, year = {2020}, url = {https://doi.org/10.1109/ISBI45749.2020.9098633}, doi = {10.1109/ISBI45749.2020.9098633}, timestamp = {Wed, 04 Oct 2023 17:01:25 +0200}, biburl = {https://dblp.org/rec/conf/isbi/RanziniGKCHOHM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/KlaserBSRMATHGC20, author = {Kerstin Kl{\"{a}}ser and Pedro Borges and Richard Shaw and Marta Ranzini and Marc Modat and David Atkinson and Kris Thielemans and Brian F. Hutton and Vicky Goh and Gary J. Cook and M. Jorge Cardoso and S{\'{e}}bastien Ourselin}, editor = {Ninon Burgos and David Svoboda and Jelmer M. Wolterink and Can Zhao}, title = {Uncertainty-Aware Multi-resolution Whole-Body {MR} to {CT} Synthesis}, booktitle = {Simulation and Synthesis in Medical Imaging - 5th International Workshop, {SASHIMI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru, October 4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12417}, pages = {110--119}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-59520-3\_12}, doi = {10.1007/978-3-030-59520-3\_12}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/KlaserBSRMATHGC20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/BoothARSLCBMAMA20, author = {Thomas C. Booth and Bernice Akpinar and Andrei Roman and Haris Shuaib and Aysha Luis and Alysha Chelliah and Ayisha Al Busaidi and Ayesha Mirchandani and Burcu Alparslan and Nina Mansoor and Keyoumars Ashkan and S{\'{e}}bastien Ourselin and Marc Modat}, editor = {Seyed Mostafa Kia and Hassan Mohy{-}ud{-}Din and Ahmed Abdulkadir and Cher Bass and Mohamad Habes and Jane Maryam Rondina and Chantal M. W. Tax and Hongzhi Wang and Thomas Wolfers and Saima Rathore and Madhura Ingalhalikar}, title = {Machine Learning and Glioblastoma: Treatment Response Monitoring Biomarkers in 2021}, booktitle = {Machine Learning in Clinical Neuroimaging and Radiogenomics in Neuro-oncology - Third International Workshop, {MLCN} 2020, and Second International Workshop, {RNO-AI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru, October 4-8, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12449}, pages = {212--228}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-66843-3\_21}, doi = {10.1007/978-3-030-66843-3\_21}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/BoothARSLCBMAMA20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/GrigorescuCBEHM20, author = {Irina Grigorescu and Lucilio Cordero{-}Grande and Dafnis Batalle and A. David Edwards and Joseph V. Hajnal and Marc Modat and Maria Deprez}, editor = {Yipeng Hu and Roxane Licandro and J. Alison Noble and Jana Hutter and Stephen R. Aylward and Andrew Melbourne and Esra Abaci Turk and Jordina Torrents{-}Barrena}, title = {Harmonised Segmentation of Neonatal Brain {MRI:} {A} Domain Adaptation Approach}, booktitle = {Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis - First International Workshop, {ASMUS} 2020, and 5th International Workshop, {PIPPI} 2020, Held in Conjunction with {MICCAI} 2020, Lima, Peru, October 4-8, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12437}, pages = {253--263}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-60334-2\_25}, doi = {10.1007/978-3-030-60334-2\_25}, timestamp = {Wed, 07 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/GrigorescuCBEHM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/DorentJSBKBSMOV20, author = {Reuben Dorent and Samuel Joutard and Jonathan Shapey and Sotirios Bisdas and Neil Kitchen and Robert Bradford and Shakeel R. Saeed and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, editor = {Anne L. Martel and Purang Abolmaesumi and Danail Stoyanov and Diana Mateus and Maria A. Zuluaga and S. Kevin Zhou and Daniel Racoceanu and Leo Joskowicz}, title = {Scribble-Based Domain Adaptation via Co-segmentation}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {12261}, pages = {479--489}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-59710-8\_47}, doi = {10.1007/978-3-030-59710-8\_47}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/DorentJSBKBSMOV20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wbir/DrobnyRIVOCM20, author = {David Drobny and Marta Ranzini and Amanda Isaac and Tom Vercauteren and S{\'{e}}bastien Ourselin and David Choi and Marc Modat}, editor = {Ziga Spiclin and Jamie McClelland and Jan Kybic and Orcun Goksel}, title = {Towards Automated Spine Mobility Quantification: {A} Locally Rigid {CT} to X-ray Registration Framework}, booktitle = {Biomedical Image Registration - 9th International Workshop, {WBIR} 2020, Portoro{\v{z}}, Slovenia, December 1-2, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12120}, pages = {67--77}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-50120-4\_7}, doi = {10.1007/978-3-030-50120-4\_7}, timestamp = {Wed, 15 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wbir/DrobnyRIVOCM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wbir/GrigorescuUCCHE20, author = {Irina Grigorescu and Alena Uus and Daan Christiaens and Lucilio Cordero{-}Grande and Jana Hutter and A. David Edwards and Joseph V. Hajnal and Marc Modat and Maria Deprez}, editor = {Ziga Spiclin and Jamie McClelland and Jan Kybic and Orcun Goksel}, title = {Diffusion Tensor Driven Image Registration: {A} Deep Learning Approach}, booktitle = {Biomedical Image Registration - 9th International Workshop, {WBIR} 2020, Portoro{\v{z}}, Slovenia, December 1-2, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12120}, pages = {131--140}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-50120-4\_13}, doi = {10.1007/978-3-030-50120-4\_13}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wbir/GrigorescuUCCHE20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2004-09321, author = {Marta Bianca Maria Ranzini and Irme Groothuis and Kerstin Kl{\"{a}}ser and M. Jorge Cardoso and Johann Henckel and S{\'{e}}bastien Ourselin and Alister Hart and Marc Modat}, title = {Combining multimodal information for Metal Artefact Reduction: An unsupervised deep learning framework}, journal = {CoRR}, volume = {abs/2004.09321}, year = {2020}, url = {https://arxiv.org/abs/2004.09321}, eprinttype = {arXiv}, eprint = {2004.09321}, timestamp = {Wed, 22 Apr 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2004-09321.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2007-03632, author = {Reuben Dorent and Samuel Joutard and Jonathan Shapey and Sotirios Bisdas and Neil Kitchen and Robert Bradford and Shakeel R. Saeed and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, title = {Scribble-based Domain Adaptation via Co-segmentation}, journal = {CoRR}, volume = {abs/2007.03632}, year = {2020}, url = {https://arxiv.org/abs/2007.03632}, eprinttype = {arXiv}, eprint = {2007.03632}, timestamp = {Mon, 26 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2007-03632.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2011-00867, author = {Benjamin Murray and Eric Kerfoot and Mark S. Graham and Carole H. Sudre and Erika Molteni and Liane S. Canas and Michela Antonelli and Alessia Visconti and Andrew T. Chan and Paul W. Franks and Richard Davies and Jonathan Wolf and Tim D. Spector and Claire J. Steves and Marc Modat and S{\'{e}}bastien Ourselin}, title = {Accessible Data Curation and Analytics for International-Scale Citizen Science Datasets}, journal = {CoRR}, volume = {abs/2011.00867}, year = {2020}, url = {https://arxiv.org/abs/2011.00867}, eprinttype = {arXiv}, eprint = {2011.00867}, timestamp = {Fri, 06 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2011-00867.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/AntonelliCJAPMP19, author = {Michela Antonelli and M. Jorge Cardoso and Edward W. Johnston and Mrishta Brizmohun Appayya and Beno{\^{\i}}t Presles and Marc Modat and Shonit Punwani and S{\'{e}}bastien Ourselin}, title = {{GAS:} {A} genetic atlas selection strategy in multi-atlas segmentation framework}, journal = {Medical Image Anal.}, volume = {52}, pages = {97--108}, year = {2019}, url = {https://doi.org/10.1016/j.media.2018.11.007}, doi = {10.1016/J.MEDIA.2018.11.007}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/AntonelliCJAPMP19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/Mehdipour-Ghazi19, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and M. Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {Training recurrent neural networks robust to incomplete data: Application to Alzheimer's disease progression modeling}, journal = {Medical Image Anal.}, volume = {53}, pages = {39--46}, year = {2019}, url = {https://doi.org/10.1016/j.media.2019.01.004}, doi = {10.1016/J.MEDIA.2019.01.004}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/Mehdipour-Ghazi19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/embc/MolteniCBGCMS19, author = {Erika Molteni and Katia Colombo and Elena Beretta and Susanna Galbiati and Liane Dos Santos Canas and Marc Modat and Sandra Strazzer}, title = {Comparison of Multi-class Machine Learning Methods for the Identification of Factors Most Predictive of Prognosis in Neurobehavioral assessment of Pediatric Severe Disorder of Consciousness through {LOCFAS} scale}, booktitle = {41st Annual International Conference of the {IEEE} Engineering in Medicine and Biology Society, {EMBC} 2019, Berlin, Germany, July 23-27, 2019}, pages = {269--272}, publisher = {{IEEE}}, year = {2019}, url = {https://doi.org/10.1109/EMBC.2019.8856880}, doi = {10.1109/EMBC.2019.8856880}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/embc/MolteniCBGCMS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/iconip/Mehdipour-Ghazi19, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and Marc Modat and M. Jorge Cardoso and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, editor = {Tom Gedeon and Kok Wai Wong and Minho Lee}, title = {On the Initialization of Long Short-Term Memory Networks}, booktitle = {Neural Information Processing - 26th International Conference, {ICONIP} 2019, Sydney, NSW, Australia, December 12-15, 2019, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {11953}, pages = {275--286}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-36708-4\_23}, doi = {10.1007/978-3-030-36708-4\_23}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/iconip/Mehdipour-Ghazi19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/Orbes-ArteagaVS19, author = {Mauricio Orbes{-}Arteaga and Thomas Varsavsky and Carole H. Sudre and Zach Eaton{-}Rosen and Lewis J. Haddow and Lauge S{\o}rensen and Mads Nielsen and Akshay Pai and S{\'{e}}bastien Ourselin and Marc Modat and Parashkev Nachev and M. Jorge Cardoso}, editor = {Qian Wang and Fausto Milletari and Hien Van Nguyen and Shadi Albarqouni and M. Jorge Cardoso and Nicola Rieke and Ziyue Xu and Konstantinos Kamnitsas and Vishal Patel and Badri Roysam and Steve B. Jiang and S. Kevin Zhou and Khoa Luu and Ngan Le}, title = {Multi-domain Adaptation in Brain {MRI} Through Paired Consistency and Adversarial Learning}, booktitle = {Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data - First {MICCAI} Workshop, {DART} 2019, and First International Workshop, {MIL3ID} 2019, Shenzhen, Held in Conjunction with {MICCAI} 2019, Shenzhen, China, October 13 and 17, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11795}, pages = {54--62}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-33391-1\_7}, doi = {10.1007/978-3-030-33391-1\_7}, timestamp = {Thu, 04 May 2023 17:10:57 +0200}, biburl = {https://dblp.org/rec/conf/miccai/Orbes-ArteagaVS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/Orbes-Arteainst19, author = {Mauricio Orbes{-}Arteaga and M. Jorge Cardoso and Lauge S{\o}rensen and Christian Igel and S{\'{e}}bastien Ourselin and Marc Modat and Mads Nielsen and Akshay Pai}, editor = {Luping Zhou and Duygu Sarikaya and Seyed Mostafa Kia and Stefanie Speidel and Anand Malpani and Daniel A. Hashimoto and Mohamad Habes and Tommy L{\"{o}}fstedt and Kerstin Ritter and Hongzhi Wang}, title = {Knowledge Distillation for Semi-supervised Domain Adaptation}, booktitle = {{OR} 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - Second International Workshop, {OR} 2.0 2019, and Second International Workshop, {MLCN} 2019, Held in Conjunction with {MICCAI} 2019, Shenzhen, China, October 13 and 17, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11796}, pages = {68--76}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-32695-1\_8}, doi = {10.1007/978-3-030-32695-1\_8}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/Orbes-Arteainst19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/DorentJMOV19, author = {Reuben Dorent and Samuel Joutard and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, editor = {Dinggang Shen and Tianming Liu and Terry M. Peters and Lawrence H. Staib and Caroline Essert and Sean Zhou and Pew{-}Thian Yap and Ali R. Khan}, title = {Hetero-Modal Variational Encoder-Decoder for Joint Modality Completion and Segmentation}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {11765}, pages = {74--82}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-32245-8\_9}, doi = {10.1007/978-3-030-32245-8\_9}, timestamp = {Mon, 19 Feb 2024 14:24:13 +0100}, biburl = {https://dblp.org/rec/conf/miccai/DorentJMOV19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/GrigorescuCEHMD19, author = {Irina Grigorescu and Lucilio Cordero{-}Grande and A. David Edwards and Joseph V. Hajnal and Marc Modat and Maria Deprez}, editor = {Qian Wang and Alberto G{\'{o}}mez and Jana Hutter and Kristin McLeod and Veronika A. M. Zimmer and Oliver Zettinig and Roxane Licandro and Emma C. Robinson and Daan Christiaens and Esra Abaci Turk and Andrew Melbourne}, title = {Investigating Image Registration Impact on Preterm Birth Classification: An Interpretable Deep Learning Approach}, booktitle = {Smart Ultrasound Imaging and Perinatal, Preterm and Paediatric Image Analysis - First International Workshop, {SUSI} 2019, and 4th International Workshop, {PIPPI} 2019, Held in Conjunction with {MICCAI} 2019, Shenzhen, China, October 13 and 17, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11798}, pages = {104--112}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-32875-7\_12}, doi = {10.1007/978-3-030-32875-7\_12}, timestamp = {Mon, 22 Jun 2020 17:43:02 +0200}, biburl = {https://dblp.org/rec/conf/miccai/GrigorescuCEHMD19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/DrobnyROVM19, author = {David Drobny and Marta Ranzini and S{\'{e}}bastien Ourselin and Tom Vercauteren and Marc Modat}, editor = {Luping Zhou and Nicholas Heller and Yiyu Shi and Yiming Xiao and Raphael Sznitman and Veronika Cheplygina and Diana Mateus and Emanuele Trucco and Xiaobo Sharon Hu and Danny Ziyi Chen and Matthieu Chabanas and Hassan Rivaz and Ingerid Reinertsen}, title = {Landmark-Based Evaluation of a Block-Matching Registration Framework on the {RESECT} Pre- and Intra-operative Brain Image Data Set}, booktitle = {Large-Scale Annotation of Biomedical Data and Expert Label Synthesis and Hardware Aware Learning for Medical Imaging and Computer Assisted Intervention - International Workshops, {LABELS} 2019, {HAL-MICCAI} 2019, and CuRIOUS 2019, Held in Conjunction with {MICCAI} 2019, Shenzhen, China, October 13 and 17, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11851}, pages = {136--144}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-33642-4\_15}, doi = {10.1007/978-3-030-33642-4\_15}, timestamp = {Tue, 13 Dec 2022 14:39:05 +0100}, biburl = {https://dblp.org/rec/conf/miccai/DrobnyROVM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/JoutardDIOVM19, author = {Samuel Joutard and Reuben Dorent and Amanda Isaac and S{\'{e}}bastien Ourselin and Tom Vercauteren and Marc Modat}, editor = {Dinggang Shen and Tianming Liu and Terry M. Peters and Lawrence H. Staib and Caroline Essert and Sean Zhou and Pew{-}Thian Yap and Ali R. Khan}, title = {Permutohedral Attention Module for Efficient Non-local Neural Networks}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part {VI}}, series = {Lecture Notes in Computer Science}, volume = {11769}, pages = {393--401}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-32226-7\_44}, doi = {10.1007/978-3-030-32226-7\_44}, timestamp = {Mon, 19 Feb 2024 14:24:13 +0100}, biburl = {https://dblp.org/rec/conf/miccai/JoutardDIOVM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/FidonEGMOV19, author = {Lucas Fidon and Michael Ebner and Luis C. Garc{\'{\i}}a{-}Peraza{-}Herrera and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, editor = {Dinggang Shen and Tianming Liu and Terry M. Peters and Lawrence H. Staib and Caroline Essert and Sean Zhou and Pew{-}Thian Yap and Ali R. Khan}, title = {Incompressible Image Registration Using Divergence-Conforming B-Splines}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2019 - 22nd International Conference, Shenzhen, China, October 13-17, 2019, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {11765}, pages = {438--446}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-32245-8\_49}, doi = {10.1007/978-3-030-32245-8\_49}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/FidonEGMOV19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/Orbes-ArtegaSCM19, author = {Mauricio Orbes{-}Arteaga and Lauge S{\o}rensen and Manuel Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Stefan Sommer and Mads Nielsen and Christian Igel and Akshay Pai}, editor = {Elsa D. Angelini and Bennett A. Landman}, title = {{PADDIT:} Probabilistic Augmentation of Data using Diffeomorphic Image Transformation}, booktitle = {Medical Imaging 2019: Image Processing, San Diego, California, United States, 16-21 February 2019}, series = {{SPIE} Proceedings}, volume = {10949}, pages = {109490S}, publisher = {{SPIE}}, year = {2019}, url = {https://doi.org/10.1117/12.2512520}, doi = {10.1117/12.2512520}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/Orbes-ArtegaSCM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1901-02499, author = {Da Ma and Manuel Jorge Cardoso and Maria A. Zuluaga and Marc Modat and Nick M. Powell and Frances K. Wiseman and Victor L. J. Tybulewicz and Elizabeth M. C. Fisher and Mark F. Lythgoe and S{\'{e}}bastien Ourselin}, title = {Grey matter sublayer thickness estimation in themouse cerebellum}, journal = {CoRR}, volume = {abs/1901.02499}, year = {2019}, url = {http://arxiv.org/abs/1901.02499}, eprinttype = {arXiv}, eprint = {1901.02499}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1901-02499.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1903-07173, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and M. Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {Training recurrent neural networks robust to incomplete data: application to Alzheimer's disease progression modeling}, journal = {CoRR}, volume = {abs/1903.07173}, year = {2019}, url = {http://arxiv.org/abs/1903.07173}, eprinttype = {arXiv}, eprint = {1903.07173}, timestamp = {Mon, 01 Apr 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1903-07173.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1907-00641, author = {Samuel Joutard and Reuben Dorent and Amanda Isaac and S{\'{e}}bastien Ourselin and Tom Vercauteren and Marc Modat}, title = {Permutohedral Attention Module for Efficient Non-Local Neural Networks}, journal = {CoRR}, volume = {abs/1907.00641}, year = {2019}, url = {http://arxiv.org/abs/1907.00641}, eprinttype = {arXiv}, eprint = {1907.00641}, timestamp = {Mon, 08 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1907-00641.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1907-11150, author = {Reuben Dorent and Samuel Joutard and Marc Modat and S{\'{e}}bastien Ourselin and Tom Vercauteren}, title = {Hetero-Modal Variational Encoder-Decoder for Joint Modality Completion and Segmentation}, journal = {CoRR}, volume = {abs/1907.11150}, year = {2019}, url = {http://arxiv.org/abs/1907.11150}, eprinttype = {arXiv}, eprint = {1907.11150}, timestamp = {Tue, 30 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1907-11150.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1908-05338, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and Marc Modat and M. Jorge Cardoso and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {Robust parametric modeling of Alzheimer's disease progression}, journal = {CoRR}, volume = {abs/1908.05338}, year = {2019}, url = {http://arxiv.org/abs/1908.05338}, eprinttype = {arXiv}, eprint = {1908.05338}, timestamp = {Sat, 23 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1908-05338.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1908-05959, author = {Mauricio Orbes{-}Arteaga and Thomas Varsavsky and Carole H. Sudre and Zach Eaton{-}Rosen and Lewis J. Haddow and Lauge S{\o}rensen and Mads Nielsen and Akshay Pai and S{\'{e}}bastien Ourselin and Marc Modat and Parashkev Nachev and Manuel Jorge Cardoso}, title = {Multi-Domain Adaptation in Brain {MRI} through Paired Consistency and Adversarial Learning}, journal = {CoRR}, volume = {abs/1908.05959}, year = {2019}, url = {http://arxiv.org/abs/1908.05959}, eprinttype = {arXiv}, eprint = {1908.05959}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1908-05959.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1908-07355, author = {Mauricio Orbes{-}Arteaga and M. Jorge Cardoso and Lauge S{\o}rensen and Christian Igel and S{\'{e}}bastien Ourselin and Marc Modat and Mads Nielsen and Akshay Pai}, title = {Knowledge distillation for semi-supervised domain adaptation}, journal = {CoRR}, volume = {abs/1908.07355}, year = {2019}, url = {http://arxiv.org/abs/1908.07355}, eprinttype = {arXiv}, eprint = {1908.07355}, timestamp = {Sat, 23 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1908-07355.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1912-10454, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and Marc Modat and M. Jorge Cardoso and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {On the Initialization of Long Short-Term Memory Networks}, journal = {CoRR}, volume = {abs/1912.10454}, year = {2019}, url = {http://arxiv.org/abs/1912.10454}, eprinttype = {arXiv}, eprint = {1912.10454}, timestamp = {Fri, 03 Jan 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1912-10454.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cmpb/GibsonLSFSWEGDH18, author = {Eli Gibson and Wenqi Li and Carole H. Sudre and Lucas Fidon and Dzhoshkun I. Shakir and Guotai Wang and Zach Eaton{-}Rosen and Robert J. Gray and Tom Doel and Yipeng Hu and Tom Whyntie and Parashkev Nachev and Marc Modat and Dean C. Barratt and S{\'{e}}bastien Ourselin and M. Jorge Cardoso and Tom Vercauteren}, title = {NiftyNet: a deep-learning platform for medical imaging}, journal = {Comput. Methods Programs Biomed.}, volume = {158}, pages = {113--122}, year = {2018}, url = {https://doi.org/10.1016/j.cmpb.2018.01.025}, doi = {10.1016/J.CMPB.2018.01.025}, timestamp = {Mon, 19 Sep 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cmpb/GibsonLSFSWEGDH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/PichatIYOM18, author = {Jonas Pichat and Juan Eugenio Iglesias and Tarek A. Yousry and S{\'{e}}bastien Ourselin and Marc Modat}, title = {A Survey of Methods for 3D Histology Reconstruction}, journal = {Medical Image Anal.}, volume = {46}, pages = {73--105}, year = {2018}, url = {https://doi.org/10.1016/j.media.2018.02.004}, doi = {10.1016/J.MEDIA.2018.02.004}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/PichatIYOM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/HuMGLGBWBMEONBV18, author = {Yipeng Hu and Marc Modat and Eli Gibson and Wenqi Li and Nooshin Ghavami and Ester Bonmati and Guotai Wang and Steven Bandula and Caroline M. Moore and Mark Emberton and S{\'{e}}bastien Ourselin and J. Alison Noble and Dean C. Barratt and Tom Vercauteren}, title = {Weakly-supervised convolutional neural networks for multimodal image registration}, journal = {Medical Image Anal.}, volume = {49}, pages = {1--13}, year = {2018}, url = {https://doi.org/10.1016/j.media.2018.07.002}, doi = {10.1016/J.MEDIA.2018.07.002}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/HuMGLGBWBMEONBV18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/IglesiasMPSAVLF18, author = {Juan Eugenio Iglesias and Marc Modat and Lo{\"{\i}}c Peter and Allison Stevens and Roberto Annunziata and Tom Vercauteren and Ed S. Lein and Bruce Fischl and S{\'{e}}bastien Ourselin}, title = {Joint registration and synthesis using a probabilistic model for alignment of {MRI} and histological sections}, journal = {Medical Image Anal.}, volume = {50}, pages = {127--144}, year = {2018}, url = {https://doi.org/10.1016/j.media.2018.09.002}, doi = {10.1016/J.MEDIA.2018.09.002}, timestamp = {Mon, 08 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/IglesiasMPSAVLF18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/FerrarisMVPIMLM18, author = {Sebastiano Ferraris and Johannes L. van der Merwe and Lennart Van Der Veeken and Ferran Prados and Juan Eugenio Iglesias and Andrew Melbourne and Marco Lorenzi and Marc Modat and Willy Gsell and Jan Deprest and Tom Vercauteren}, title = {A magnetic resonance multi-atlas for the neonatal rabbit brain}, journal = {NeuroImage}, volume = {179}, pages = {187--198}, year = {2018}, url = {https://doi.org/10.1016/j.neuroimage.2018.06.029}, doi = {10.1016/J.NEUROIMAGE.2018.06.029}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/FerrarisMVPIMLM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/EbnerMFOV18, author = {Michael Ebner and Marc Modat and Sebastiano Ferraris and S{\'{e}}bastien Ourselin and Tom Vercauteren}, title = {Forward-backward splitting in deformable image registration: {A} demons approach}, booktitle = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2018, Washington, DC, USA, April 4-7, 2018}, pages = {1065--1069}, publisher = {{IEEE}}, year = {2018}, url = {https://doi.org/10.1109/ISBI.2018.8363755}, doi = {10.1109/ISBI.2018.8363755}, timestamp = {Wed, 04 Oct 2023 17:01:25 +0200}, biburl = {https://dblp.org/rec/conf/isbi/EbnerMFOV18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/HuMGGBMENBV18, author = {Yipeng Hu and Marc Modat and Eli Gibson and Nooshin Ghavami and Ester Bonmati and Caroline M. Moore and Mark Emberton and J. Alison Noble and Dean C. Barratt and Tom Vercauteren}, title = {Label-driven weakly-supervised learning for multimodal deformarle image registration}, booktitle = {15th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2018, Washington, DC, USA, April 4-7, 2018}, pages = {1070--1074}, publisher = {{IEEE}}, year = {2018}, url = {https://doi.org/10.1109/ISBI.2018.8363756}, doi = {10.1109/ISBI.2018.8363756}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbi/HuMGGBMENBV18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/micad/CanasYCMVBOMM18, author = {Liane S. Canas and Benjamin C. Yvernault and David M. Cash and Erika Molteni and Tom Veale and Tammie L. S. Benzinger and S{\'{e}}bastien Ourselin and Simon Mead and Marc Modat}, editor = {Nicholas A. Petrick and Kensaku Mori}, title = {Gaussian Processes with optimal kernel construction for neuro-degenerative clinical onset prediction}, booktitle = {Medical Imaging 2018: Computer-Aided Diagnosis, Houston, Texas, USA, 10-15 February 2018}, series = {{SPIE} Proceedings}, volume = {10575}, pages = {105750G}, publisher = {{SPIE}}, year = {2018}, url = {https://doi.org/10.1117/12.2293242}, doi = {10.1117/12.2293242}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/micad/CanasYCMVBOMM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/KlaserMRLMHATCO18, author = {Kerstin Kl{\"{a}}ser and Pawel Markiewicz and Marta Bianca Maria Ranzini and Wenqi Li and Marc Modat and Brian F. Hutton and David Atkinson and Kris Thielemans and M. Jorge Cardoso and S{\'{e}}bastien Ourselin}, editor = {Ali Gooya and Orcun Goksel and Ipek Oguz and Ninon Burgos}, title = {Deep Boosted Regression for {MR} to {CT} Synthesis}, booktitle = {Simulation and Synthesis in Medical Imaging - Third International Workshop, {SASHIMI} 2018, Held in Conjunction with {MICCAI} 2018, Granada, Spain, September 16, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11037}, pages = {61--70}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-00536-8\_7}, doi = {10.1007/978-3-030-00536-8\_7}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/KlaserMRLMHATCO18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/IglesiasLFPMSFV18, author = {Juan Eugenio Iglesias and Marco Lorenzi and Sebastiano Ferraris and Lo{\"{\i}}c Peter and Marc Modat and Allison Stevens and Bruce Fischl and Tom Vercauteren}, editor = {Alejandro F. Frangi and Julia A. Schnabel and Christos Davatzikos and Carlos Alberola{-}L{\'{o}}pez and Gabor Fichtinger}, title = {Model-Based Refinement of Nonlinear Registrations in 3D Histology Reconstruction}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {11071}, pages = {147--155}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-00934-2\_17}, doi = {10.1007/978-3-030-00934-2\_17}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/IglesiasLFPMSFV18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/DrobnyVOM18, author = {David Drobny and Tom Vercauteren and S{\'{e}}bastien Ourselin and Marc Modat}, editor = {Danail Stoyanov and Zeike Taylor and Stephen R. Aylward and Jo{\~{a}}o Manuel R. S. Tavares and Yiming Xiao and Amber L. Simpson and Anne L. Martel and Lena Maier{-}Hein and Shuo Li and Hassan Rivaz and Ingerid Reinertsen and Matthieu Chabanas and Keyvan Farahani}, title = {Registration of {MRI} and iUS Data to Compensate Brain Shift Using a Symmetric Block-Matching Based Approach}, booktitle = {Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation - International Workshops, {POCUS} 2018, {BIVPCS} 2018, CuRIOUS 2018, and {CPM} 2018, Held in Conjunction with {MICCAI} 2018, Granada, Spain, September 16-20, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11042}, pages = {172--178}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-01045-4\_21}, doi = {10.1007/978-3-030-01045-4\_21}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miccai/DrobnyVOM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/GeorgiadisYHRSS18, author = {Konstantinos Georgiadis and Alexandra L. Young and Michael H{\"{u}}tel and Adeel Razi and Carla Semedo and Jonathan M. Schott and S{\'{e}}bastien Ourselin and Jason D. Warren and Marc Modat}, editor = {Alejandro F. Frangi and Julia A. Schnabel and Christos Davatzikos and Carlos Alberola{-}L{\'{o}}pez and Gabor Fichtinger}, title = {Computational Modelling of Pathogenic Protein Behaviour-Governing Mechanisms in the Brain}, booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI} 2018 - 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {11072}, pages = {532--539}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-030-00931-1\_61}, doi = {10.1007/978-3-030-00931-1\_61}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/GeorgiadisYHRSS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/CanasYSVCTBOMM18, author = {Liane S. Canas and Benjamin C. Yvernault and Carole H. Sudre and Enrico De Vita and M. Jorge Cardoso and John S. Thornton and Frederik Barkhof and S{\'{e}}bastien Ourselin and Simon Mead and Marc Modat}, editor = {Elsa D. Angelini and Bennett A. Landman}, title = {Imaging biomarkers for the diagnosis of Prion disease}, booktitle = {Medical Imaging 2018: Image Processing, Houston, Texas, United States, 10-15 February 2018}, series = {{SPIE} Proceedings}, volume = {10574}, pages = {1057405}, publisher = {{SPIE}}, year = {2018}, url = {https://doi.org/10.1117/12.2293676}, doi = {10.1117/12.2293676}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/CanasYSVCTBOMM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1801-05284, author = {Juan Eugenio Iglesias and Marc Modat and Lo{\"{\i}}c Peter and Allison Stevens and Roberto Annunziata and Tom Vercauteren and Ed S. Lein and Bruce Fischl and S{\'{e}}bastien Ourselin}, title = {Joint registration and synthesis using a probabilistic model for alignment of {MRI} and histological sections}, journal = {CoRR}, volume = {abs/1801.05284}, year = {2018}, url = {http://arxiv.org/abs/1801.05284}, eprinttype = {arXiv}, eprint = {1801.05284}, timestamp = {Mon, 08 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1801-05284.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1807-03361, author = {Yipeng Hu and Marc Modat and Eli Gibson and Wenqi Li and Nooshin Ghavami and Ester Bonmati and Guotai Wang and Steven Bandula and Caroline M. Moore and Mark Emberton and S{\'{e}}bastien Ourselin and J. Alison Noble and Dean C. Barratt and Tom Vercauteren}, title = {Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration}, journal = {CoRR}, volume = {abs/1807.03361}, year = {2018}, url = {http://arxiv.org/abs/1807.03361}, eprinttype = {arXiv}, eprint = {1807.03361}, timestamp = {Fri, 11 Feb 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1807-03361.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1808-05500, author = {Mostafa Mehdipour{-}Ghazi and Mads Nielsen and Akshay Pai and M. Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Lauge S{\o}rensen}, title = {Robust training of recurrent neural networks to handle missing data for disease progression modeling}, journal = {CoRR}, volume = {abs/1808.05500}, year = {2018}, url = {http://arxiv.org/abs/1808.05500}, eprinttype = {arXiv}, eprint = {1808.05500}, timestamp = {Sat, 23 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1808-05500.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1808-06519, author = {Mauricio Orbes{-}Arteaga and M. Jorge Cardoso and Lauge S{\o}rensen and Marc Modat and S{\'{e}}bastien Ourselin and Mads Nielsen and Akshay Pai}, title = {Simultaneous synthesis of {FLAIR} and segmentation of white matter hypointensities from {T1} MRIs}, journal = {CoRR}, volume = {abs/1808.06519}, year = {2018}, url = {http://arxiv.org/abs/1808.06519}, eprinttype = {arXiv}, eprint = {1808.06519}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1808-06519.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1808-07431, author = {Kerstin Kl{\"{a}}ser and Pawel Markiewicz and Marta Bianca Maria Ranzini and Wenqi Li and Marc Modat and Brian F. Hutton and David Atkinson and Kris Thielemans and M. Jorge Cardoso and S{\'{e}}bastien Ourselin}, title = {Deep Boosted Regression for {MR} to {CT} Synthesis}, journal = {CoRR}, volume = {abs/1808.07431}, year = {2018}, url = {http://arxiv.org/abs/1808.07431}, eprinttype = {arXiv}, eprint = {1808.07431}, timestamp = {Fri, 11 Feb 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-1808-07431.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1810-01928, author = {Mauricio Orbes{-}Arteaga and Lauge S{\o}rensen and Manuel Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Stefan Sommer and Mads Nielsen and Christian Igel and Akshay Pai}, title = {{PADDIT:} Probabilistic Augmentation of Data using Diffeomorphic Image Transformation}, journal = {CoRR}, volume = {abs/1810.01928}, year = {2018}, url = {http://arxiv.org/abs/1810.01928}, eprinttype = {arXiv}, eprint = {1810.01928}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1810-01928.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/fini/HolmesPMIHWCOJM17, author = {Holly E. Holmes and Nick M. Powell and Da Ma and Ozama Ismail and Ian F. Harrison and Jack A. Wells and Niall Colgan and James M. O'Callaghan and Ross A. Johnson and Tracey K. Murray and Zeshan Ahmed and Morten Heggenes and Alice Fisher and M. Jorge Cardoso and Marc Modat and Michael J. O'Neill and Emily C. Collins and Elizabeth M. C. Fisher and S{\'{e}}bastien Ourselin and Mark F. Lythgoe}, title = {Comparison of In Vivo and Ex Vivo {MRI} for the Detection of Structural Abnormalities in a Mouse Model of Tauopathy}, journal = {Frontiers Neuroinformatics}, volume = {11}, pages = {20}, year = {2017}, url = {https://doi.org/10.3389/fninf.2017.00020}, doi = {10.3389/FNINF.2017.00020}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/fini/HolmesPMIHWCOJM17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/gpem/LangdonLMPH17, author = {William B. Langdon and Brian Yee Hong Lam and Marc Modat and Justyna Petke and Mark Harman}, title = {Genetic improvement of {GPU} software}, journal = {Genet. Program. Evolvable Mach.}, volume = {18}, number = {1}, pages = {5--44}, year = {2017}, url = {https://doi.org/10.1007/s10710-016-9273-9}, doi = {10.1007/S10710-016-9273-9}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/gpem/LangdonLMPH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/IglesiasFMGDMV17, author = {Juan Eugenio Iglesias and Sebastiano Ferraris and Marc Modat and Willy Gsell and Jan Deprest and Johannes L. van der Merwe and Tom Vercauteren}, editor = {M. Jorge Cardoso and Tal Arbel and Andrew Melbourne and Hrvoje Bogunovic and Pim Moeskops and Xinjian Chen and Ernst Schwartz and Mona Kathryn Garvin and Emma C. Robinson and Emanuele Trucco and Michael Ebner and Yanwu Xu and Antonios Makropoulos and Adrien E. Desjardins and Tom Vercauteren}, title = {Template-Free Estimation of Intracranial Volume: {A} Preterm Birth Animal Model Study}, booktitle = {Fetal, Infant and Ophthalmic Medical Image Analysis - International Workshop, {FIFI} 2017, and 4th International Workshop, {OMIA} 2017, Held in Conjunction with {MICCAI} 2017, Qu{\'{e}}bec City, QC, Canada, September 14, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10554}, pages = {3--13}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-67561-9\_1}, doi = {10.1007/978-3-319-67561-9\_1}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/IglesiasFMGDMV17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/RanziniECFVHHOM17, author = {Marta Bianca Maria Ranzini and Michael Ebner and M. Jorge Cardoso and Anastasia Fotiadou and Tom Vercauteren and Johann Henckel and Alister Hart and S{\'{e}}bastien Ourselin and Marc Modat}, editor = {Ben Glocker and Jianhua Yao and Tomaz Vrtovec and Alejandro F. Frangi and Guoyan Zheng}, title = {Joint Multimodal Segmentation of Clinical {CT} and {MR} from Hip Arthroplasty Patients}, booktitle = {Computational Methods and Clinical Applications in Musculoskeletal Imaging - 5th International Workshop, {MSKI} 2017, Held in Conjunction with {MICCAI} 2017, Quebec City, QC, Canada, September 10, 2017, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {10734}, pages = {72--84}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-74113-0\_7}, doi = {10.1007/978-3-319-74113-0\_7}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/RanziniECFVHHOM17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1708-08117, author = {Jonas Pichat and Juan Eugenio Iglesias and Sotiris Nousias and Tarek A. Yousry and S{\'{e}}bastien Ourselin and Marc Modat}, title = {Part-to-whole Registration of Histology and {MRI} using Shape Elements}, journal = {CoRR}, volume = {abs/1708.08117}, year = {2017}, url = {http://arxiv.org/abs/1708.08117}, eprinttype = {arXiv}, eprint = {1708.08117}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1708-08117.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-1711-01666, author = {Yipeng Hu and Marc Modat and Eli Gibson and Nooshin Ghavami and Ester Bonmati and Caroline M. Moore and Mark Emberton and J. Alison Noble and Dean C. Barratt and Tom Vercauteren}, title = {Label-driven weakly-supervised learning for multimodal deformable image registration}, journal = {CoRR}, volume = {abs/1711.01666}, year = {2017}, url = {http://arxiv.org/abs/1711.01666}, eprinttype = {arXiv}, eprint = {1711.01666}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-1711-01666.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tbe/XuLHMROAL16, author = {Zhoubing Xu and Christopher P. Lee and Mattias P. Heinrich and Marc Modat and Daniel Rueckert and S{\'{e}}bastien Ourselin and Richard G. Abramson and Bennett A. Landman}, title = {Evaluation of Six Registration Methods for the Human Abdomen on Clinically Acquired {CT}}, journal = {{IEEE} Trans. Biomed. Eng.}, volume = {63}, number = {8}, pages = {1563--1572}, year = {2016}, url = {https://doi.org/10.1109/TBME.2016.2574816}, doi = {10.1109/TBME.2016.2574816}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tbe/XuLHMROAL16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cvpr/FerrarisLDMV16, author = {Sebastiano Ferraris and Marco Lorenzi and Pankaj Daga and Marc Modat and Tom Vercauteren}, title = {Accurate Small Deformation Exponential Approximant to Integrate Large Velocity Fields: Application to Image Registration}, booktitle = {2016 {IEEE} Conference on Computer Vision and Pattern Recognition Workshops, {CVPR} Workshops 2016, Las Vegas, NV, USA, June 26 - July 1, 2016}, pages = {457--464}, publisher = {{IEEE} Computer Society}, year = {2016}, url = {https://doi.org/10.1109/CVPRW.2016.64}, doi = {10.1109/CVPRW.2016.64}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cvpr/FerrarisLDMV16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CuryLCNRRODM16, author = {Claire Cury and Marco Lorenzi and David M. Cash and Jennifer M. Nicholas and Alexandre Routier and Jonathan D. Rohrer and S{\'{e}}bastien Ourselin and Stanley Durrleman and Marc Modat}, editor = {Martin Reuter and Christian Wachinger and Herv{\'{e}} Lombaert}, title = {Spatio-Temporal Shape Analysis of Cross-Sectional Data for Detection of Early Changes in Neurodegenerative Disease}, booktitle = {Spectral and Shape Analysis in Medical Imaging - First International Workshop, SeSAMI 2016, Held in Conjunction with {MICCAI} 2016, Athens, Greece, October 21, 2016, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {10126}, pages = {63--75}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-51237-2\_6}, doi = {10.1007/978-3-319-51237-2\_6}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CuryLCNRRODM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/KochanMVWMWMTYD16, author = {Martin Kochan and Marc Modat and Tom Vercauteren and Mark White and Laura Mancini and Gavin P. Winston and Andrew W. McEvoy and John S. Thornton and Tarek A. Yousry and John S. Duncan and S{\'{e}}bastien Ourselin and Danail Stoyanov}, editor = {S{\'{e}}bastien Ourselin and Leo Joskowicz and Mert R. Sabuncu and G{\"{o}}zde B. {\"{U}}nal and William M. Wells III}, title = {Bilateral Weighted Adaptive Local Similarity Measure for Registration in Neurosurgery}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2016 - 19th International Conference, Athens, Greece, October 17-21, 2016, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {9902}, pages = {81--88}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-46726-9\_10}, doi = {10.1007/978-3-319-46726-9\_10}, timestamp = {Mon, 05 Feb 2024 20:27:27 +0100}, biburl = {https://dblp.org/rec/conf/miccai/KochanMVWMWMTYD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cars/JohnsenTCHMEHHM15, author = {Stian Flage Johnsen and Zeike A. Taylor and Matthew J. Clarkson and John H. Hipwell and Marc Modat and Bj{\"{o}}rn Eiben and Lianghao Han and Yipeng Hu and Thomy Mertzanidou and David J. Hawkes and S{\'{e}}bastien Ourselin}, title = {NiftySim: {A} GPU-based nonlinear finite element package for simulation of soft tissue biomechanics}, journal = {Int. J. Comput. Assist. Radiol. Surg.}, volume = {10}, number = {7}, pages = {1077--1095}, year = {2015}, url = {https://doi.org/10.1007/s11548-014-1118-5}, doi = {10.1007/S11548-014-1118-5}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/cars/JohnsenTCHMEHHM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/SimpsonCMCWASO15, author = {Ivor J. A. Simpson and Manuel Jorge Cardoso and Marc Modat and David M. Cash and Mark W. Woolrich and Jesper L. R. Andersson and Julia A. Schnabel and S{\'{e}}bastien Ourselin}, title = {Probabilistic non-linear registration with spatially adaptive regularisation}, journal = {Medical Image Anal.}, volume = {26}, number = {1}, pages = {203--216}, year = {2015}, url = {https://doi.org/10.1016/j.media.2015.08.006}, doi = {10.1016/J.MEDIA.2015.08.006}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/mia/SimpsonCMCWASO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/WellsOHPJSTIWGR15, author = {Jack A. Wells and James M. O'Callaghan and Holly E. Holmes and Nick M. Powell and Ross A. Johnson and Bernard Siow and F. Torrealdea and Ozama Ismail and S. Walker{-}Samuel and Xavier Golay and M. Rega and Simon Richardson and Marc Modat and Manuel Jorge Cardoso and S{\'{e}}bastien Ourselin and Adam J. Schwarz and Zeshan Ahmed and Tracey K. Murray and Michael J. O'Neill and Emily C. Collins and Niall Colgan and Mark F. Lythgoe}, title = {In vivo imaging of tau pathology using multi-parametric quantitative {MRI}}, journal = {NeuroImage}, volume = {111}, pages = {369--378}, year = {2015}, url = {https://doi.org/10.1016/j.neuroimage.2015.02.023}, doi = {10.1016/J.NEUROIMAGE.2015.02.023}, timestamp = {Mon, 02 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/WellsOHPJSTIWGR15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/Eaton-RosenMOCM15, author = {Zach Eaton{-}Rosen and Andrew Melbourne and Eliza Orasanu and Manuel Jorge Cardoso and Marc Modat and Alan Bainbridge and Giles S. Kendall and Nicola J. Robertson and Neil Marlow and S{\'{e}}bastien Ourselin}, title = {Longitudinal measurement of the developing grey matter in preterm subjects using multi-modal {MRI}}, journal = {NeuroImage}, volume = {111}, pages = {580--589}, year = {2015}, url = {https://doi.org/10.1016/j.neuroimage.2015.02.010}, doi = {10.1016/J.NEUROIMAGE.2015.02.010}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/Eaton-RosenMOCM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/CashFIUKFSBRFLF15, author = {David M. Cash and Chris Frost and Leonardo O. Iheme and Devrim {\"{U}}nay and Melek Kandemir and Jurgen Fripp and Olivier Salvado and Pierrick Bourgeat and Martin Reuter and Bruce Fischl and Marco Lorenzi and Giovanni B. Frisoni and Xavier Pennec and Ronald K. Pierson and Jeffrey L. Gunter and Matthew L. Senjem and Clifford R. Jack Jr. and Nicolas Guizard and Vladimir S. Fonov and D. Louis Collins and Marc Modat and M. Jorge Cardoso and Kelvin K. Leung and Hongzhi Wang and Sandhitsu R. Das and Paul A. Yushkevich and Ian B. Malone and Nick C. Fox and Jonathan M. Schott and S{\'{e}}bastien Ourselin}, title = {Assessing atrophy measurement techniques in dementia: Results from the {MIRIAD} atrophy challenge}, journal = {NeuroImage}, volume = {123}, pages = {149--164}, year = {2015}, url = {https://doi.org/10.1016/j.neuroimage.2015.07.087}, doi = {10.1016/J.NEUROIMAGE.2015.07.087}, timestamp = {Mon, 25 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/CashFIUKFSBRFLF15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/CardosoMWMCRO15, author = {Manuel Jorge Cardoso and Marc Modat and Robin Wolz and Andrew Melbourne and David M. Cash and Daniel Rueckert and S{\'{e}}bastien Ourselin}, title = {Geodesic Information Flows: Spatially-Variant Graphs and Their Application to Segmentation and Fusion}, journal = {{IEEE} Trans. Medical Imaging}, volume = {34}, number = {9}, pages = {1976--1988}, year = {2015}, url = {https://doi.org/10.1109/TMI.2015.2418298}, doi = {10.1109/TMI.2015.2418298}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tmi/CardosoMWMCRO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icml/YoungMCMAO15, author = {Jonathan Young and Alex F. Mendelson and Manuel Jorge Cardoso and Marc Modat and John Ashburner and S{\'{e}}bastien Ourselin}, editor = {Kanwal K. Bhatia and Herve Lombaert}, title = {Improving {MRI} Brain Image Classification with Anatomical Regional Kernels}, booktitle = {Machine Learning Meets Medical Imaging - First International Workshop, {MLMMI} 2015, Held in Conjunction with {ICML} 2015, Lille, France, July 11, 2015. Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {9487}, pages = {45--53}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-27929-9\_5}, doi = {10.1007/978-3-319-27929-9\_5}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/icml/YoungMCMAO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipmi/CardosoSMO15, author = {Manuel Jorge Cardoso and Carole H. Sudre and Marc Modat and S{\'{e}}bastien Ourselin}, editor = {S{\'{e}}bastien Ourselin and Daniel C. Alexander and Carl{-}Fredrik Westin and Manuel Jorge Cardoso}, title = {Template-Based Multimodal Joint Generative Model of Brain Data}, booktitle = {Information Processing in Medical Imaging - 24th International Conference, {IPMI} 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9123}, pages = {17--29}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19992-4\_2}, doi = {10.1007/978-3-319-19992-4\_2}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipmi/CardosoSMO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/PichatMYO15, author = {Jonas Pichat and Marc Modat and Tarek A. Yousry and S{\'{e}}bastien Ourselin}, title = {A multi-path approach to histology volume reconstruction}, booktitle = {12th {IEEE} International Symposium on Biomedical Imaging, {ISBI} 2015, Brooklyn, NY, USA, April 16-19, 2015}, pages = {1280--1283}, publisher = {{IEEE}}, year = {2015}, url = {https://doi.org/10.1109/ISBI.2015.7164108}, doi = {10.1109/ISBI.2015.7164108}, timestamp = {Wed, 04 Oct 2023 17:01:25 +0200}, biburl = {https://dblp.org/rec/conf/isbi/PichatMYO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/JohnsenTCMSTGDT15, author = {Stian Flage Johnsen and Stephen A. Thompson and Matthew J. Clarkson and Marc Modat and Yi Song and Johannes Totz and Kurinchi Gurusamy and Brian R. Davidson and Zeike A. Taylor and David J. Hawkes and S{\'{e}}bastien Ourselin}, editor = {Nassir Navab and Joachim Hornegger and William M. Wells III and Alejandro F. Frangi}, title = {Database-Based Estimation of Liver Deformation under Pneumoperitoneum for Surgical Image-Guidance and Simulation}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2015 - 18th International Conference Munich, Germany, October 5-9, 2015, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {9350}, pages = {450--458}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-24571-3\_54}, doi = {10.1007/978-3-319-24571-3\_54}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/JohnsenTCMSTGDT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/BurgosCGVMMKPAA15, author = {Ninon Burgos and Manuel Jorge Cardoso and Filipa Guerreiro and Catarina Veiga and Marc Modat and Jamie McClelland and Antje{-}Christin Knopf and Shonit Punwani and David Atkinson and Simon R. Arridge and Brian F. Hutton and S{\'{e}}bastien Ourselin}, editor = {Nassir Navab and Joachim Hornegger and William M. Wells III and Alejandro F. Frangi}, title = {Robust {CT} Synthesis for Radiotherapy Planning: Application to the Head and Neck Region}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2015 - 18th International Conference Munich, Germany, October 5-9, 2015, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {9350}, pages = {476--484}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-24571-3\_57}, doi = {10.1007/978-3-319-24571-3\_57}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/BurgosCGVMMKPAA15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/MaCZMPWTFLO15, author = {Da Ma and Manuel Jorge Cardoso and Maria A. Zuluaga and Marc Modat and Nick M. Powell and Frances K. Wiseman and Victor L. J. Tybulewicz and Elizabeth M. C. Fisher and Mark F. Lythgoe and S{\'{e}}bastien Ourselin}, editor = {Nassir Navab and Joachim Hornegger and William M. Wells III and Alejandro F. Frangi}, title = {Grey Matter Sublayer Thickness Estimation in the Mouse Cerebellum}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2015 - 18th International Conference Munich, Germany, October 5 - 9, 2015, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {9351}, pages = {644--651}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-24574-4\_77}, doi = {10.1007/978-3-319-24574-4\_77}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/MaCZMPWTFLO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoMVO15, author = {Manuel Jorge Cardoso and Marc Modat and Tom Vercauteren and S{\'{e}}bastien Ourselin}, editor = {Nassir Navab and Joachim Hornegger and William M. Wells III and Alejandro F. Frangi}, title = {Scale Factor Point Spread Function Matching: Beyond Aliasing in Image Resampling}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2015 - 18th International Conference Munich, Germany, October 5-9, 2015, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {9350}, pages = {675--683}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-24571-3\_81}, doi = {10.1007/978-3-319-24571-3\_81}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoMVO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/KlemtMPCHHO15, author = {Christian Klemt and Marc Modat and Jonas Pichat and Manuel Jorge Cardoso and Johann Henckel and Alister Hart and S{\'{e}}bastien Ourselin}, editor = {S{\'{e}}bastien Ourselin and Martin Andreas Styner}, title = {Automatic assessment of volume asymmetries applied to hip abductor muscles in patients with hip arthroplasty}, booktitle = {Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February 24-26, 2015}, series = {{SPIE} Proceedings}, volume = {9413}, pages = {94131M}, publisher = {{SPIE}}, year = {2015}, url = {https://doi.org/10.1117/12.2082341}, doi = {10.1117/12.2082341}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/KlemtMPCHHO15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/DagaPMWMWMTYDDO14, author = {Pankaj Daga and Tejas Pendse and Marc Modat and Mark White and Laura Mancini and Gavin P. Winston and Andrew W. McEvoy and John S. Thornton and Tarek A. Yousry and Ivana Drobnjak and John S. Duncan and S{\'{e}}bastien Ourselin}, title = {Susceptibility artefact correction using dynamic graph cuts: Application to neurosurgery}, journal = {Medical Image Anal.}, volume = {18}, number = {7}, pages = {1132--1142}, year = {2014}, url = {https://doi.org/10.1016/j.media.2014.06.008}, doi = {10.1016/J.MEDIA.2014.06.008}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/mia/DagaPMWMWMTYDDO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/HanHEBMOH14, author = {Lianghao Han and John H. Hipwell and Bj{\"{o}}rn Eiben and Dean C. Barratt and Marc Modat and S{\'{e}}bastien Ourselin and David J. Hawkes}, title = {A Nonlinear Biomechanical Model Based Registration Method for Aligning Prone and Supine {MR} Breast Images}, journal = {{IEEE} Trans. Medical Imaging}, volume = {33}, number = {3}, pages = {682--694}, year = {2014}, url = {https://doi.org/10.1109/TMI.2013.2294539}, doi = {10.1109/TMI.2013.2294539}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tmi/HanHEBMOH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/BurgosCTMPDBAMSDAAHO14, author = {Ninon Burgos and Manuel Jorge Cardoso and Kris Thielemans and Marc Modat and Stefano Pedemonte and John C. Dickson and Anna Barnes and Rebekah Ahmed and Colin J. Mahoney and Jonathan M. Schott and John S. Duncan and David Atkinson and Simon R. Arridge and Brian F. Hutton and S{\'{e}}bastien Ourselin}, title = {Attenuation Correction Synthesis for Hybrid {PET-MR} Scanners: Application to Brain Studies}, journal = {{IEEE} Trans. Medical Imaging}, volume = {33}, number = {12}, pages = {2332--2341}, year = {2014}, url = {https://doi.org/10.1109/TMI.2014.2340135}, doi = {10.1109/TMI.2014.2340135}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tmi/BurgosCTMPDBAMSDAAHO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gecco/LangdonMPH14, author = {William B. Langdon and Marc Modat and Justyna Petke and Mark Harman}, editor = {Dirk V. Arnold}, title = {Improving 3D medical image registration {CUDA} software with genetic programming}, booktitle = {Genetic and Evolutionary Computation Conference, {GECCO} '14, Vancouver, BC, Canada, July 12-16, 2014}, pages = {951--958}, publisher = {{ACM}}, year = {2014}, url = {https://doi.org/10.1145/2576768.2598244}, doi = {10.1145/2576768.2598244}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gecco/LangdonMPH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/ModatSCCTFO14, author = {Marc Modat and Ivor J. A. Simpson and Manuel Jorge Cardoso and David M. Cash and Nicolas Toussaint and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Polina Golland and Nobuhiko Hata and Christian Barillot and Joachim Hornegger and Robert D. Howe}, title = {Simulating Neurodegeneration through Longitudinal Population Analysis of Structural and Diffusion Weighted {MRI} Data}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {8675}, pages = {57--64}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-10443-0\_8}, doi = {10.1007/978-3-319-10443-0\_8}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/ModatSCCTFO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/Eaton-RosenMOMCBKRMO14, author = {Zach Eaton{-}Rosen and Andrew Melbourne and Eliza Orasanu and Marc Modat and Manuel Jorge Cardoso and Alan Bainbridge and Giles S. Kendall and Nicola J. Robertson and Neil Marlow and S{\'{e}}bastien Ourselin}, editor = {Polina Golland and Nobuhiko Hata and Christian Barillot and Joachim Hornegger and Robert D. Howe}, title = {Longitudinal Measurement of the Developing Thalamus in the Preterm Brain Using Multi-modal {MRI}}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {8674}, pages = {276--283}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-10470-6\_35}, doi = {10.1007/978-3-319-10470-6\_35}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/Eaton-RosenMOMCBKRMO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/BragmanMMOHH14, author = {Felix J. S. Bragman and Jamie R. McClelland and Marc Modat and S{\'{e}}bastien Ourselin and John R. Hurst and David J. Hawkes}, editor = {Polina Golland and Nobuhiko Hata and Christian Barillot and Joachim Hornegger and Robert D. Howe}, title = {Multi-scale Analysis of Imaging Features and Its Use in the Study of {COPD} Exacerbation Susceptible Phenotypes}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2014 - 17th International Conference, Boston, MA, USA, September 14-18, 2014, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {8675}, pages = {417--424}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-10443-0\_53}, doi = {10.1007/978-3-319-10443-0\_53}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/BragmanMMOHH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/HamyMSDCPOAM14, author = {Valentin Hamy and Marc Modat and Rebecca Shipley and Nikolaos Dikaios and Jon O. Cleary and Shonit Punwani and S{\'{e}}bastien Ourselin and David Atkinson and Andrew Melbourne}, editor = {S{\'{e}}bastien Ourselin and Martin A. Styner}, title = {Multi-modal pharmacokinetic modelling for {DCE-MRI:} using diffusion weighted imaging to constrain the local arterial input function}, booktitle = {Medical Imaging 2014: Image Processing, San Diego, California, USA, February 16-18, 2014}, series = {{SPIE} Proceedings}, volume = {9034}, pages = {90340R}, publisher = {{SPIE}}, year = {2014}, url = {https://doi.org/10.1117/12.2042780}, doi = {10.1117/12.2042780}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/HamyMSDCPOAM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/ModatCDWDO14, author = {Marc Modat and David M. Cash and Pankaj Daga and Gavin P. Winston and John S. Duncan and S{\'{e}}bastien Ourselin}, editor = {S{\'{e}}bastien Ourselin and Martin A. Styner}, title = {A symmetric block-matching framework for global registration}, booktitle = {Medical Imaging 2014: Image Processing, San Diego, California, USA, February 16-18, 2014}, series = {{SPIE} Proceedings}, volume = {9034}, pages = {90341D}, publisher = {{SPIE}}, year = {2014}, url = {https://doi.org/10.1117/12.2043652}, doi = {10.1117/12.2043652}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/ModatCDWDO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/nips/YoungMCAO14, author = {Jonathan Young and Marc Modat and Manuel Jorge Cardoso and John Ashburner and S{\'{e}}bastien Ourselin}, editor = {Irina Rish and Georg Langs and Leila Wehbe and Guillermo A. Cecchi and Kai{-}min Kevin Chang and Brian Murphy}, title = {An Oblique Approach to Prediction of Conversion to Alzheimer's Disease with Multikernel Gaussian Processes}, booktitle = {Machine Learning and Interpretation in Neuroimaging - 4th International Workshop, {MLINI} 2014, Held at {NIPS} 2014, Montreal, QC, Canada, December 13, 2014, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {9444}, pages = {122--128}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-45174-9\_13}, doi = {10.1007/978-3-319-45174-9\_13}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/nips/YoungMCAO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/wbir/2014, editor = {S{\'{e}}bastien Ourselin and Marc Modat}, title = {Biomedical Image Registration - 6th International Workshop, {WBIR} 2014, London, UK, July 7-8, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8545}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08554-8}, doi = {10.1007/978-3-319-08554-8}, isbn = {978-3-319-08553-1}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wbir/2014.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/mia/CardosoLMKCBFO13, author = {Manuel Jorge Cardoso and Kelvin K. Leung and Marc Modat and Shiva Keihaninejad and David M. Cash and Josephine Barnes and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {{STEPS:} Similarity and Truth Estimation for Propagated Segmentations and its application to hippocampal segmentation and brain parcelation}, journal = {Medical Image Anal.}, volume = {17}, number = {6}, pages = {671--684}, year = {2013}, url = {https://doi.org/10.1016/j.media.2013.02.006}, doi = {10.1016/J.MEDIA.2013.02.006}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/mia/CardosoLMKCBFO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/CardosoMKMRMO13, author = {Manuel Jorge Cardoso and Andrew Melbourne and Giles S. Kendall and Marc Modat and Nicola J. Robertson and Neil Marlow and S{\'{e}}bastien Ourselin}, title = {AdaPT: An adaptive preterm segmentation algorithm for neonatal brain {MRI}}, journal = {NeuroImage}, volume = {65}, pages = {97--108}, year = {2013}, url = {https://doi.org/10.1016/j.neuroimage.2012.08.009}, doi = {10.1016/J.NEUROIMAGE.2012.08.009}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/CardosoMKMRMO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/KeihaninejadZRMMCCFO13, author = {Shiva Keihaninejad and Hui Zhang and Natalie S. Ryan and Ian B. Malone and Marc Modat and Manuel Jorge Cardoso and David M. Cash and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease}, journal = {NeuroImage}, volume = {72}, pages = {153--163}, year = {2013}, url = {https://doi.org/10.1016/j.neuroimage.2013.01.044}, doi = {10.1016/J.NEUROIMAGE.2013.01.044}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/KeihaninejadZRMMCCFO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/fimh/ZuluagaCMO13, author = {Maria A. Zuluaga and Manuel Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin}, editor = {S{\'{e}}bastien Ourselin and Daniel Rueckert and Nicolas Smith}, title = {Multi-atlas Propagation Whole Heart Segmentation from {MRI} and {CTA} Using a Local Normalised Correlation Coefficient Criterion}, booktitle = {Functional Imaging and Modeling of the Heart - 7th International Conference, {FIMH} 2013, London, UK, June 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7945}, pages = {174--181}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38899-6\_21}, doi = {10.1007/978-3-642-38899-6\_21}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/fimh/ZuluagaCMO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/SimpsonWCCMSO13, author = {Ivor J. A. Simpson and Mark William Woolrich and Manuel Jorge Cardoso and David M. Cash and Marc Modat and Julia A. Schnabel and S{\'{e}}bastien Ourselin}, editor = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, title = {A Bayesian Approach for Spatially Adaptive Regularisation in Non-rigid Registration}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {8150}, pages = {10--18}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-40763-5\_2}, doi = {10.1007/978-3-642-40763-5\_2}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/SimpsonWCCMSO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/RothMHBHMZOHH13, author = {Holger Roth and Jamie McClelland and Thomas Hampshire and Darren Boone and Yipeng Hu and Marc Modat and Hui Zhang and S{\'{e}}bastien Ourselin and Steve Halligan and David J. Hawkes}, editor = {Hiroyuki Yoshida and Simon K. Warfield and Michael W. Vannier}, title = {Registration of Prone and Supine {CT} Colonography Datasets with Differing Endoluminal Distension}, booktitle = {Abdominal Imaging. Computation and Clinical Applications - 5th International Workshop, Held in Conjunction with {MICCAI} 2013, Nagoya, Japan, September 22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8198}, pages = {29--38}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-41083-3\_4}, doi = {10.1007/978-3-642-41083-3\_4}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/RothMHBHMZOHH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/BurgosCMPDBDAAHO13, author = {Ninon Burgos and Manuel Jorge Cardoso and Marc Modat and Stefano Pedemonte and John C. Dickson and Anna Barnes and John S. Duncan and David Atkinson and Simon R. Arridge and Brian F. Hutton and S{\'{e}}bastien Ourselin}, editor = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, title = {Attenuation Correction Synthesis for Hybrid {PET-MR} Scanners}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {8149}, pages = {147--154}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-40811-3\_19}, doi = {10.1007/978-3-642-40811-3\_19}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/BurgosCMPDBDAAHO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/PetersenMCDOB13, author = {Jens Petersen and Marc Modat and Manuel Jorge Cardoso and Asger Dirksen and S{\'{e}}bastien Ourselin and Marleen de Bruijne}, editor = {Kensaku Mori and Ichiro Sakuma and Yoshinobu Sato and Christian Barillot and Nassir Navab}, title = {Quantitative Airway Analysis in Longitudinal Studies Using Groupwise Registration and 4D Optimal Surfaces}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2013 - 16th International Conference, Nagoya, Japan, September 22-26, 2013, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {8150}, pages = {287--294}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-40763-5\_36}, doi = {10.1007/978-3-642-40763-5\_36}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/PetersenMCDOB13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/DagaMWWMMTYDO13, author = {Pankaj Daga and Marc Modat and Gavin Winston and Mark White and Laura Mancini and Andrew W. McEvoy and John S. Thornton and Tarek A. Yousry and John S. Duncan and S{\'{e}}bastien Ourselin}, editor = {S{\'{e}}bastien Ourselin and David R. Haynor}, title = {Susceptibility artefact correction by combining {B0} field maps and non-rigid registration using graph cuts}, booktitle = {Medical Imaging 2013: Image Processing, Lake Buena Vista (Orlando Area), Florida, USA, February 10-12, 2013}, series = {{SPIE} Proceedings}, volume = {8669}, pages = {86690B}, publisher = {{SPIE}}, year = {2013}, url = {https://doi.org/10.1117/12.2006800}, doi = {10.1117/12.2006800}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miip/DagaMWWMMTYDO13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/RothMMHBHPHOHH13, author = {Holger R. Roth and Jamie R. McClelland and Marc Modat and Thomas Hampshire and Darren Boone and Emma Helbren and Andrew Plumb and Mingxing Hu and S{\'{e}}bastien Ourselin and Steve Halligan and David J. Hawkes}, editor = {S{\'{e}}bastien Ourselin and David R. Haynor}, title = {{CT} colonography: inverse-consistent symmetric registration of prone and supine inner colon surfaces}, booktitle = {Medical Imaging 2013: Image Processing, Lake Buena Vista (Orlando Area), Florida, USA, February 10-12, 2013}, series = {{SPIE} Proceedings}, volume = {8669}, pages = {866912}, publisher = {{SPIE}}, year = {2013}, url = {https://doi.org/10.1117/12.2007004}, doi = {10.1117/12.2007004}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/RothMMHBHPHOHH13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/FonteijnMCBLHSTOFA12, author = {Hubert M. J. Fonteijn and Marc Modat and Matthew J. Clarkson and Josephine Barnes and Manja Lehmann and Nicola Z. Hobbs and Rachael I. Scahill and Sarah J. Tabrizi and S{\'{e}}bastien Ourselin and Nick C. Fox and Daniel C. Alexander}, title = {An event-based model for disease progression and its application in familial Alzheimer's disease and Huntington's disease}, journal = {NeuroImage}, volume = {60}, number = {3}, pages = {1880--1889}, year = {2012}, url = {https://doi.org/10.1016/j.neuroimage.2012.01.062}, doi = {10.1016/J.NEUROIMAGE.2012.01.062}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/FonteijnMCBLHSTOFA12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/DagaWMWMCSSMTMYHDO12, author = {Pankaj Daga and Gavin Winston and Marc Modat and Mark White and Laura Mancini and Manuel Jorge Cardoso and Mark R. Symms and Jason Stretton and Andrew W. McEvoy and John S. Thornton and Caroline Micallef and Tarek A. Yousry and David J. Hawkes and John S. Duncan and S{\'{e}}bastien Ourselin}, title = {Accurate Localization of Optic Radiation During Neurosurgery in an Interventional {MRI} Suite}, journal = {{IEEE} Trans. Medical Imaging}, volume = {31}, number = {4}, pages = {882--891}, year = {2012}, url = {https://doi.org/10.1109/TMI.2011.2179668}, doi = {10.1109/TMI.2011.2179668}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tmi/DagaWMWMCSSMTMYHDO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/YoungMCAO12, author = {Jonathan Young and Marc Modat and Manuel Jorge Cardoso and John Ashburner and S{\'{e}}bastien Ourselin}, title = {Classification of Alzheimer's disease patients and controls with Gaussian processes}, booktitle = {9th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2012, May 2-5, 2012, Barcelona, Spain, Proceedings}, pages = {1523--1526}, publisher = {{IEEE}}, year = {2012}, url = {https://doi.org/10.1109/ISBI.2012.6235862}, doi = {10.1109/ISBI.2012.6235862}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbi/YoungMCAO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoWMKDO12, author = {Manuel Jorge Cardoso and Gavin Winston and Marc Modat and Shiva Keihaninejad and John S. Duncan and S{\'{e}}bastien Ourselin}, editor = {Nicholas Ayache and Herv{\'{e}} Delingette and Polina Golland and Kensaku Mori}, title = {Geodesic Shape-Based Averaging}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {7512}, pages = {26--33}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-33454-2\_4}, doi = {10.1007/978-3-642-33454-2\_4}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoWMKDO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/SimonyanMOCCZ12, author = {Karen Simonyan and Marc Modat and S{\'{e}}bastien Ourselin and David M. Cash and Antonio Criminisi and Andrew Zisserman}, editor = {Hayit Greenspan and Henning M{\"{u}}ller and Tanveer Fathima Syeda{-}Mahmood}, title = {Immediate {ROI} Search for 3-D Medical Images}, booktitle = {Medical Content-Based Retrieval for Clinical Decision Support - Third {MICCAI} International Workshop, {MCBR-CDS} 2012, Nice, France, October 1, 2012, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {7723}, pages = {56--67}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-36678-9\_6}, doi = {10.1007/978-3-642-36678-9\_6}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/SimonyanMOCCZ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoWMFRO12, author = {Manuel Jorge Cardoso and Robin Wolz and Marc Modat and Nick C. Fox and Daniel Rueckert and S{\'{e}}bastien Ourselin}, editor = {Nicholas Ayache and Herv{\'{e}} Delingette and Polina Golland and Kensaku Mori}, title = {Geodesic Information Flows}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {7511}, pages = {262--270}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-33418-4\_33}, doi = {10.1007/978-3-642-33418-4\_33}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoWMFRO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CashMMCCFO12, author = {David M. Cash and Andrew Melbourne and Marc Modat and Manuel Jorge Cardoso and Matthew J. Clarkson and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Nicholas Ayache and Herv{\'{e}} Delingette and Polina Golland and Kensaku Mori}, title = {Cortical Folding Analysis on Patients with Alzheimer's Disease and Mild Cognitive Impairment}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2012 - 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {7512}, pages = {289--296}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-33454-2\_36}, doi = {10.1007/978-3-642-33454-2\_36}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CashMMCCFO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/DucMLKO12, author = {Albert K. Hoang Duc and Marc Modat and Kelvin K. Leung and Timor Kadir and S{\'{e}}bastien Ourselin}, editor = {David R. Haynor and S{\'{e}}bastien Ourselin}, title = {Manifold learning for atlas selection in multi atlas-based segmentation of hippocampus}, booktitle = {Medical Imaging 2012: Image Processing, San Diego, California, USA, February 4, 2012}, series = {{SPIE} Proceedings}, volume = {8314}, pages = {83140Z}, publisher = {{SPIE}}, year = {2012}, url = {https://doi.org/10.1117/12.910602}, doi = {10.1117/12.910602}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/DucMLKO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/MelbourneCTMHO12, author = {Andrew Melbourne and Nathan D. Cahill and Christine Tanner and Marc Modat and David J. Hawkes and S{\'{e}}bastien Ourselin}, editor = {David R. Haynor and S{\'{e}}bastien Ourselin}, title = {Using fractional gradient information in non-rigid image registration: application to breast {MRI}}, booktitle = {Medical Imaging 2012: Image Processing, San Diego, California, USA, February 4, 2012}, series = {{SPIE} Proceedings}, volume = {8314}, pages = {83141Z}, publisher = {{SPIE}}, year = {2012}, url = {https://doi.org/10.1117/12.911173}, doi = {10.1117/12.911173}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/MelbourneCTMHO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/mmbia/ModatDCORA12, author = {Marc Modat and Pankaj Daga and Manuel Jorge Cardoso and S{\'{e}}bastien Ourselin and Gerard R. Ridgway and John Ashburner}, title = {Parametric non-rigid registration using a stationary velocity field}, booktitle = {2012 {IEEE} Workshop on Mathematical Methods in Biomedical Image Analysis, {MMBIA} 2012, Breckenridge, CO, USA, January 9-10, 2012}, pages = {145--150}, publisher = {{IEEE}}, year = {2012}, url = {https://doi.org/10.1109/MMBIA.2012.6164745}, doi = {10.1109/MMBIA.2012.6164745}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/mmbia/ModatDCORA12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/mmbia/CardosoMOKC12, author = {Manuel Jorge Cardoso and Marc Modat and S{\'{e}}bastien Ourselin and Shiva Keihaninejad and David M. Cash}, title = {Multi-STEPS: Multi-label similarity and truth estimation for propagated segmentations}, booktitle = {2012 {IEEE} Workshop on Mathematical Methods in Biomedical Image Analysis, {MMBIA} 2012, Breckenridge, CO, USA, January 9-10, 2012}, pages = {153--158}, publisher = {{IEEE}}, year = {2012}, url = {https://doi.org/10.1109/MMBIA.2012.6164748}, doi = {10.1109/MMBIA.2012.6164748}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/mmbia/CardosoMOKC12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wbir/ModatCDCFO12, author = {Marc Modat and Manuel Jorge Cardoso and Pankaj Daga and David M. Cash and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Benoit M. Dawant and Gary E. Christensen and J. Michael Fitzpatrick and Daniel Rueckert}, title = {Inverse-Consistent Symmetric Free Form Deformation}, booktitle = {Biomedical Image Registration - 5th International Workshop, {WBIR} 2012, Nashville, TN, USA, July 7-8, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7359}, pages = {79--88}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-31340-0\_9}, doi = {10.1007/978-3-642-31340-0\_9}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wbir/ModatCDCFO12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/ClearyMNPJMGHOSOL11, author = {Jon O. Cleary and Marc Modat and Francesca C. Norris and Anthony Price and Sujatha A. Jayakody and Juan Pedro Martinez{-}Barbera and Nicholas D. E. Greene and David J. Hawkes and Roger J. Ordidge and Peter J. Scambler and S{\'{e}}bastien Ourselin and Mark F. Lythgoe}, title = {Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping}, journal = {NeuroImage}, volume = {54}, number = {2}, pages = {769--778}, year = {2011}, url = {https://doi.org/10.1016/j.neuroimage.2010.07.039}, doi = {10.1016/J.NEUROIMAGE.2010.07.039}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/ClearyMNPJMGHOSOL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/LeungBMRBFO11, author = {Kelvin K. Leung and Josephine Barnes and Marc Modat and Gerard R. Ridgway and Jonathan W. Bartlett and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {Brain {MAPS:} An automated, accurate and robust brain extraction technique using a template library}, journal = {NeuroImage}, volume = {55}, number = {3}, pages = {1091--1108}, year = {2011}, url = {https://doi.org/10.1016/j.neuroimage.2010.12.067}, doi = {10.1016/J.NEUROIMAGE.2010.12.067}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/LeungBMRBFO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/CardosoCRMFO11, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Gerard R. Ridgway and Marc Modat and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {LoAd: {A} locally adaptive cortical segmentation algorithm}, journal = {NeuroImage}, volume = {56}, number = {3}, pages = {1386--1397}, year = {2011}, url = {https://doi.org/10.1016/j.neuroimage.2011.02.013}, doi = {10.1016/J.NEUROIMAGE.2011.02.013}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/CardosoCRMFO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/ClarksonCRMLRFO11, author = {Matthew J. Clarkson and Manuel Jorge Cardoso and Gerard R. Ridgway and Marc Modat and Kelvin K. Leung and Jonathan D. Rohrer and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {A comparison of voxel and surface based cortical thickness estimation methods}, journal = {NeuroImage}, volume = {57}, number = {3}, pages = {856--865}, year = {2011}, url = {https://doi.org/10.1016/j.neuroimage.2011.05.053}, doi = {10.1016/J.NEUROIMAGE.2011.05.053}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/ClarksonCRMLRFO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tmi/MurphyGR11, author = {Keelin Murphy and Bram van Ginneken and Joseph M. Reinhardt and Sven Kabus and Kai Ding and Xiang Deng and Kunlin Cao and Kaifang Du and Gary E. Christensen and Vincent Garcia and Tom Vercauteren and Nicholas Ayache and Olivier Commowick and Gr{\'{e}}goire Malandain and Ben Glocker and Nikos Paragios and Nassir Navab and Vladlena Gorbunova and Jon Sporring and Marleen de Bruijne and Xiao Han and Mattias P. Heinrich and Julia A. Schnabel and Mark Jenkinson and Cristian Lorenz and Marc Modat and Jamie McClelland and S{\'{e}}bastien Ourselin and Sascha E. A. Muenzing and Max A. Viergever and Dante De Nigris and D. Louis Collins and Tal Arbel and Marta Peroni and Rui Li and Gregory C. Sharp and Alexander Schmidt{-}Richberg and Jan Ehrhardt and Ren{\'{e}} Werner and Dirk Smeets and Dirk Loeckx and Gang Song and Nicholas J. Tustison and Brian B. Avants and James C. Gee and Marius Staring and Stefan Klein and Berend C. Stoel and Martin Urschler and Manuel Werlberger and Jef Vandemeulebroucke and Simon Rit and David Sarrut and Josien P. W. Pluim}, title = {Evaluation of Registration Methods on Thoracic {CT:} The {EMPIRE10} Challenge}, journal = {{IEEE} Trans. Medical Imaging}, volume = {30}, number = {11}, pages = {1901--1920}, year = {2011}, url = {https://doi.org/10.1109/TMI.2011.2158349}, doi = {10.1109/TMI.2011.2158349}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/tmi/MurphyGR11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipcai/DagaWMCWMMTMYHDO11, author = {Pankaj Daga and Gavin Winston and Marc Modat and Manuel Jorge Cardoso and Mark White and Laura Mancini and Andrew W. McEvoy and John S. Thornton and Caroline Micallef and Tarek A. Yousry and David J. Hawkes and John S. Duncan and S{\'{e}}bastien Ourselin}, editor = {Russell H. Taylor and Guang{-}Zhong Yang}, title = {Improved Neuronavigation through Integration of Intraoperative Anatomical and Diffusion Images in an Interventional {MRI} Suite}, booktitle = {Information Processing in Computer-Assisted Interventions - Second International Conference, {IPCAI} 2011, Berlin, Germany, June 22, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6689}, pages = {168--178}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21504-9\_16}, doi = {10.1007/978-3-642-21504-9\_16}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ipcai/DagaWMCWMMTMYHDO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipmi/CardosoCMO11, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Marc Modat and S{\'{e}}bastien Ourselin}, editor = {G{\'{a}}bor Sz{\'{e}}kely and Horst K. Hahn}, title = {On the Extraction of Topologically Correct Thickness Measurements Using Khalimsky's Cubic Complex}, booktitle = {Information Processing in Medical Imaging - 22nd International Conference, {IPMI} 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6801}, pages = {159--170}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-22092-0\_14}, doi = {10.1007/978-3-642-22092-0\_14}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipmi/CardosoCMO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ipmi/FonteijnCMBLOFA11, author = {Hubert M. J. Fonteijn and Matthew J. Clarkson and Marc Modat and Josephine Barnes and Manja Lehmann and S{\'{e}}bastien Ourselin and Nick C. Fox and Daniel C. Alexander}, editor = {G{\'{a}}bor Sz{\'{e}}kely and Horst K. Hahn}, title = {An Event-Based Disease Progression Model and Its Application to Familial Alzheimer's Disease}, booktitle = {Information Processing in Medical Imaging - 22nd International Conference, {IPMI} 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6801}, pages = {748--759}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-22092-0\_61}, doi = {10.1007/978-3-642-22092-0\_61}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/ipmi/FonteijnCMBLOFA11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/DagaWMCSSMHDO11, author = {Pankaj Daga and Gavin Winston and Marc Modat and Manuel Jorge Cardoso and Jason Stretton and Mark R. Symms and Andrew W. McEvoy and David J. Hawkes and John S. Duncan and S{\'{e}}bastien Ourselin}, title = {Integrating structural and diffusion {MR} information for optic radiation localisation in focal epilepsy patients}, booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}}, pages = {353--356}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/ISBI.2011.5872422}, doi = {10.1109/ISBI.2011.5872422}, timestamp = {Wed, 04 Oct 2023 17:01:25 +0200}, biburl = {https://dblp.org/rec/conf/isbi/DagaWMCSSMHDO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/ClarksonCMRLRFO11, author = {Matthew J. Clarkson and Manuel Jorge Cardoso and Marc Modat and Gerard R. Ridgway and Kelvin K. Leung and Jonathan D. Rohrer and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {Cross-sectional analysis using voxel or surface based cortical thickness methods: {A} comparison study}, booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}}, pages = {381--384}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/ISBI.2011.5872428}, doi = {10.1109/ISBI.2011.5872428}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbi/ClarksonCMRLRFO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/HanHMCMOH11, author = {Lianghao Han and John H. Hipwell and Thomy Mertzanidou and Timothy J. Carter and Marc Modat and S{\'{e}}bastien Ourselin and David J. Hawkes}, title = {A hybrid fem-based method for aligning prone and supine images for image guided breast surgery}, booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}}, pages = {1239--1242}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/ISBI.2011.5872626}, doi = {10.1109/ISBI.2011.5872626}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbi/HanHMCMOH11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/LeungBMRBFO11, author = {Kelvin K. Leung and Josephine Barnes and Marc Modat and Gerard R. Ridgway and Jonathan W. Bartlett and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {Automated brain extraction using Multi-Atlas Propagation and Segmentation {(MAPS)}}, booktitle = {Proceedings of the 8th {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, {ISBI} 2011, March 30 - April 2, 2011, Chicago, Illinois, {USA}}, pages = {2053--2056}, publisher = {{IEEE}}, year = {2011}, url = {https://doi.org/10.1109/ISBI.2011.5872816}, doi = {10.1109/ISBI.2011.5872816}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbi/LeungBMRBFO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoMKMHRMO11, author = {Manuel Jorge Cardoso and Andrew Melbourne and Giles S. Kendall and Marc Modat and Cornelia F. Hagmann and Nicola J. Robertson and Neil Marlow and S{\'{e}}bastien Ourselin}, editor = {Gabor Fichtinger and Anne L. Martel and Terry M. Peters}, title = {Adaptive Neonate Brain Segmentation}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2011 - 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {6893}, pages = {378--386}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-23626-6\_47}, doi = {10.1007/978-3-642-23626-6\_47}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoMKMHRMO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoCMO11, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Marc Modat and S{\'{e}}bastien Ourselin}, editor = {Gabor Fichtinger and Anne L. Martel and Terry M. Peters}, title = {Longitudinal Cortical Thickness Estimation Using Khalimsky's Cubic Complex}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2011 - 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {6892}, pages = {467--475}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-23629-7\_57}, doi = {10.1007/978-3-642-23629-7\_57}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoCMO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/CardosoCMTCO11, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Marc Modat and Hugues Talbot and Michel Couprie and S{\'{e}}bastien Ourselin}, editor = {Benoit M. Dawant and David R. Haynor}, title = {Topologically correct cortical segmentation using Khalimsky's cubic complex framework}, booktitle = {Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February 14-16, 2011}, series = {{SPIE} Proceedings}, volume = {7962}, pages = {79620P}, publisher = {{SPIE}}, year = {2011}, url = {https://doi.org/10.1117/12.878190}, doi = {10.1117/12.878190}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/CardosoCMTCO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/ModatRDCHAO11, author = {Marc Modat and Gerard R. Ridgway and Pankaj Daga and Manuel Jorge Cardoso and David J. Hawkes and John Ashburner and S{\'{e}}bastien Ourselin}, editor = {Benoit M. Dawant and David R. Haynor}, title = {Log-Euclidean free-form deformation}, booktitle = {Medical Imaging 2011: Image Processing, Lake Buena Vista, Florida, USA, February 14-16, 2011}, series = {{SPIE} Proceedings}, volume = {7962}, pages = {79621Q}, publisher = {{SPIE}}, year = {2011}, url = {https://doi.org/10.1117/12.878189}, doi = {10.1117/12.878189}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/ModatRDCHAO11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cmpb/ModatRTLBHFO10, author = {Marc Modat and Gerard R. Ridgway and Zeike A. Taylor and Manja Lehmann and Josephine Barnes and David J. Hawkes and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {Fast free-form deformation using graphics processing units}, journal = {Comput. Methods Programs Biomed.}, volume = {98}, number = {3}, pages = {278--284}, year = {2010}, url = {https://doi.org/10.1016/j.cmpb.2009.09.002}, doi = {10.1016/J.CMPB.2009.09.002}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/cmpb/ModatRTLBHFO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/LehmannDKMCOBF10, author = {Manja Lehmann and Abdel Douiri and Lois G. Kim and Marc Modat and Dennis Chan and S{\'{e}}bastien Ourselin and Josephine Barnes and Nick C. Fox}, title = {Atrophy patterns in Alzheimer's disease and semantic dementia: {A} comparison of FreeSurfer and manual volumetric measurements}, journal = {NeuroImage}, volume = {49}, number = {3}, pages = {2264--2274}, year = {2010}, url = {https://doi.org/10.1016/j.neuroimage.2009.10.056}, doi = {10.1016/J.NEUROIMAGE.2009.10.056}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/LehmannDKMCOBF10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/RohrerRMOMFRW10, author = {Jonathan D. Rohrer and Gerard R. Ridgway and Marc Modat and S{\'{e}}bastien Ourselin and Simon Mead and Nick C. Fox and Martin Rossor and Jason D. Warren}, title = {Distinct profiles of brain atrophy in frontotemporal lobar degeneration caused by progranulin and tau mutations}, journal = {NeuroImage}, volume = {53}, number = {3}, pages = {1070--1076}, year = {2010}, url = {https://doi.org/10.1016/j.neuroimage.2009.12.088}, doi = {10.1016/J.NEUROIMAGE.2009.12.088}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/neuroimage/RohrerRMOMFRW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/ModatRHFO10, author = {Marc Modat and Gerard R. Ridgway and David J. Hawkes and Nick C. Fox and S{\'{e}}bastien Ourselin}, title = {Nonrigid registration with differential bias correction using normalised mutual information}, booktitle = {Proceedings of the 2010 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010}, pages = {356--359}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/ISBI.2010.5490337}, doi = {10.1109/ISBI.2010.5490337}, timestamp = {Wed, 04 Oct 2023 17:01:25 +0200}, biburl = {https://dblp.org/rec/conf/isbi/ModatRHFO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbi/CardosoCMRO10, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Marc Modat and Gerard R. Ridgway and S{\'{e}}bastien Ourselin}, title = {Locally weighted Markov random fields for cortical segmentation}, booktitle = {Proceedings of the 2010 {IEEE} International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, 14-17 April, 2010}, pages = {956--959}, publisher = {{IEEE}}, year = {2010}, url = {https://doi.org/10.1109/ISBI.2010.5490146}, doi = {10.1109/ISBI.2010.5490146}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbi/CardosoCMRO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/RothMMBHOSHH10, author = {Holger Roth and Jamie McClelland and Marc Modat and Darren Boone and Mingxing Hu and S{\'{e}}bastien Ourselin and Greg G. Slabaugh and Steve Halligan and David J. Hawkes}, editor = {Tianzi Jiang and Nassir Navab and Josien P. W. Pluim and Max A. Viergever}, title = {Establishing Spatial Correspondence between the Inner Colon Surfaces from Prone and Supine {CT} Colonography}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2010, 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {6363}, pages = {497--504}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-15711-0\_62}, doi = {10.1007/978-3-642-15711-0\_62}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/RothMMBHOSHH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/ClarksonMMLRAFO10, author = {Matthew J. Clarkson and Ian B. Malone and Marc Modat and Kelvin K. Leung and Natalie S. Ryan and Daniel C. Alexander and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Tianzi Jiang and Nassir Navab and Josien P. W. Pluim and Max A. Viergever}, title = {A Framework for Using Diffusion Weighted Imaging to Improve Cortical Parcellation}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2010, 13th International Conference, Beijing, China, September 20-24, 2010, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {6361}, pages = {534--541}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-15705-9\_65}, doi = {10.1007/978-3-642-15705-9\_65}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/ClarksonMMLRAFO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/ModatVRHFO10, author = {Marc Modat and Tom Vercauteren and Gerard R. Ridgway and David J. Hawkes and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Benoit M. Dawant and David R. Haynor}, title = {Diffeomorphic demons using normalized mutual information, evaluation on multimodal brain {MR} images}, booktitle = {Medical Imaging 2010: Image Processing, San Diego, California, USA, February 14-16, 2010}, series = {{SPIE} Proceedings}, volume = {7623}, pages = {76232K}, publisher = {{SPIE}}, year = {2010}, url = {https://doi.org/10.1117/12.843962}, doi = {10.1117/12.843962}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miip/ModatVRHFO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wbir/ModatTRBWHFO10, author = {Marc Modat and Zeike A. Taylor and Gerard R. Ridgway and Josephine Barnes and Edward J. Wild and David J. Hawkes and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Bernd Fischer and Benoit M. Dawant and Cristian Lorenz}, title = {Nonlinear Elastic Spline Registration: Evaluation with Longitudinal Huntington's Disease Data}, booktitle = {Biomedical Image Registration, 4th International Workshop, {WBIR} 2010, L{\"{u}}beck, Germany, July 11-13, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6204}, pages = {128--139}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-14366-3\_12}, doi = {10.1007/978-3-642-14366-3\_12}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wbir/ModatTRBWHFO10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miccai/CardosoCRMFO09, author = {Manuel Jorge Cardoso and Matthew J. Clarkson and Gerard R. Ridgway and Marc Modat and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Guang{-}Zhong Yang and David J. Hawkes and Daniel Rueckert and J. Alison Noble and Christopher J. Taylor}, title = {Improved Maximum a Posteriori Cortical Segmentation by Iterative Relaxation of Priors}, booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI} 2009, 12th International Conference, London, UK, September 20-24, 2009, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {5762}, pages = {441--449}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-04271-3\_54}, doi = {10.1007/978-3-642-04271-3\_54}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/miccai/CardosoCRMFO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/miip/ModatRTHFO09, author = {Marc Modat and Gerard R. Ridgway and Zeike A. Taylor and Daves J. Hawkes and Nick C. Fox and S{\'{e}}bastien Ourselin}, editor = {Josien P. W. Pluim and Benoit M. Dawant}, title = {A parallel-friendly normalized mutual information gradient for free-form registration}, booktitle = {Medical Imaging 2009: Image Processing, Lake Buena Vista (Orlando Area), Florida, United States, 7-12 February 2009}, series = {{SPIE} Proceedings}, volume = {7259}, pages = {72590L}, publisher = {{SPIE}}, year = {2009}, url = {https://doi.org/10.1117/12.811588}, doi = {10.1117/12.811588}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/miip/ModatRTHFO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/cars/MangSCMCPBJOBH08, author = {Andreas Mang and Julia A. Schnabel and William R. Crum and Marc Modat and Oscar Camara{-}Rey and Christoph Palm and Gisele Brasil{-}Caseiras and Hans Rolf J{\"{a}}ger and S{\'{e}}bastien Ourselin and Thorsten M. Buzug and David J. Hawkes}, title = {Consistency of parametric registration in serial {MRI} studies of brain tumor progression}, journal = {Int. J. Comput. Assist. Radiol. Surg.}, volume = {3}, number = {3-4}, pages = {201--211}, year = {2008}, url = {https://doi.org/10.1007/s11548-008-0234-5}, doi = {10.1007/S11548-008-0234-5}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/cars/MangSCMCPBJOBH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/neuroimage/FrippBARMPJOMAEMCVRSO08, author = {Jurgen Fripp and Pierrick Bourgeat and Oscar Acosta and Parnesh Raniga and Marc Modat and Kerryn E. Pike and Gareth Jones and Graeme O'Keefe and Colin L. Masters and David Ames and Kathryn A. Ellis and Paul Maruff and Jon Currie and Victor Villemagne and Christopher Rowe and Olivier Salvado and S{\'{e}}bastien Ourselin}, title = {Appearance modeling of \({}^{\mbox{11}}\)C PiB {PET} images: Characterizing amyloid deposition in Alzheimer's disease, mild cognitive impairment and healthy aging}, journal = {NeuroImage}, volume = {43}, number = {3}, pages = {430--439}, year = {2008}, url = {https://doi.org/10.1016/j.neuroimage.2008.07.053}, doi = {10.1016/J.NEUROIMAGE.2008.07.053}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/neuroimage/FrippBARMPJOMAEMCVRSO08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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