BibTeX records: Paolo D'Onorio De Meo

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@inproceedings{DBLP:conf/parco/DAntonioMCF17,
  author       = {Mattia D'Antonio and
                  Paolo D'Onorio De Meo and
                  Claudio Cacciari and
                  Giuseppe Fiameni},
  editor       = {Sanzio Bassini and
                  Marco Danelutto and
                  Patrizio Dazzi and
                  Gerhard R. Joubert and
                  Frans J. Peters},
  title        = {Characterization of Genomic Data Using Graph Databases},
  booktitle    = {Parallel Computing is Everywhere, Proceedings of the International
                  Conference on Parallel Computing, ParCo 2017, 12-15 September 2017,
                  Bologna, Italy},
  series       = {Advances in Parallel Computing},
  volume       = {32},
  pages        = {423--432},
  publisher    = {{IOS} Press},
  year         = {2017},
  url          = {https://doi.org/10.3233/978-1-61499-843-3-423},
  doi          = {10.3233/978-1-61499-843-3-423},
  timestamp    = {Thu, 08 Mar 2018 09:54:45 +0100},
  biburl       = {https://dblp.org/rec/conf/parco/DAntonioMCF17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpcs/DAntonioMCEPP14,
  author       = {Mattia D'Antonio and
                  Paolo D'Onorio De Meo and
                  Tiziana Castrignan{\`{o}} and
                  Giovanni Erbacci and
                  Matteo Pallocca and
                  Graziano Pesole},
  title        = {{ODESSA:} {A} high performance analysis pipeline for Ultra Deep targeted
                  Exome Sequencing data},
  booktitle    = {International Conference on High Performance Computing {\&} Simulation,
                  {HPCS} 2014, Bologna, Italy, 21-25 July, 2014},
  pages        = {608--615},
  publisher    = {{IEEE}},
  year         = {2014},
  url          = {https://doi.org/10.1109/HPCSim.2014.6903743},
  doi          = {10.1109/HPCSIM.2014.6903743},
  timestamp    = {Wed, 16 Oct 2019 14:14:55 +0200},
  biburl       = {https://dblp.org/rec/conf/hpcs/DAntonioMCEPP14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DAntonioMPEPSPPC13,
  author       = {Mattia D'Antonio and
                  Paolo D'Onorio De Meo and
                  Daniele Paoletti and
                  Berardino Elmi and
                  Matteo Pallocca and
                  Nico Sanna and
                  Ernesto Picardi and
                  Graziano Pesole and
                  Tiziana Castrignan{\`{o}}},
  title        = {{WEP:} a high-performance analysis pipeline for whole-exome data},
  journal      = {{BMC} Bioinform.},
  volume       = {14},
  number       = {{S-7}},
  pages        = {S11},
  year         = {2013},
  url          = {https://doi.org/10.1186/1471-2105-14-S7-S11},
  doi          = {10.1186/1471-2105-14-S7-S11},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DAntonioMPEPSPPC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GiuliettiPDMPCDPZPPP13,
  author       = {Matteo Giulietti and
                  Francesco Piva and
                  Mattia D'Antonio and
                  Paolo D'Onorio De Meo and
                  Daniele Paoletti and
                  Tiziana Castrignan{\`{o}} and
                  Anna Maria D'Erchia and
                  Ernesto Picardi and
                  Federico Zambelli and
                  Giovanni Principato and
                  Giulio Pavesi and
                  Graziano Pesole},
  title        = {SpliceAid-F: a database of human splicing factors and their RNA-binding
                  sites},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Database-Issue},
  pages        = {125--131},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gks997},
  doi          = {10.1093/NAR/GKS997},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/GiuliettiPDMPCDPZPPP13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MeoDGLBPCPG12,
  author       = {Paolo D'Onorio De Meo and
                  Mattia D'Antonio and
                  Francesca Griggio and
                  Renato Lupi and
                  Massimiliano Borsani and
                  Giulio Pavesi and
                  Tiziana Castrignan{\`{o}} and
                  Graziano Pesole and
                  Carmela Gissi},
  title        = {MitoZoa 2.0: a database resource and search tools for comparative
                  and evolutionary analyses of mitochondrial genomes in Metazoa},
  journal      = {Nucleic Acids Res.},
  volume       = {40},
  number       = {Database-Issue},
  pages        = {1168--1172},
  year         = {2012},
  url          = {https://doi.org/10.1093/nar/gkr1144},
  doi          = {10.1093/NAR/GKR1144},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/MeoDGLBPCPG12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MartelliDBCDMFFLMMPPRRVZZCP11,
  author       = {Pier Luigi Martelli and
                  Mattia D'Antonio and
                  Paola Bonizzoni and
                  Tiziana Castrignan{\`{o}} and
                  Anna Maria D'Erchia and
                  Paolo D'Onorio De Meo and
                  Piero Fariselli and
                  Michele Finelli and
                  Flavio Licciulli and
                  Marina Mangiulli and
                  Flavio Mignone and
                  Giulio Pavesi and
                  Ernesto Picardi and
                  Raffaella Rizzi and
                  Ivan Rossi and
                  Alessio Valletti and
                  Andrea Zauli and
                  Federico Zambelli and
                  Rita Casadio and
                  Graziano Pesole},
  title        = {ASPicDB: a database of annotated transcript and protein variants generated
                  by alternative splicing},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Database-Issue},
  pages        = {80--85},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkq1073},
  doi          = {10.1093/NAR/GKQ1073},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/MartelliDBCDMFFLMMPPRRVZZCP11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HornerPCMLSPP10,
  author       = {David Stephen Horner and
                  Giulio Pavesi and
                  Tiziana Castrignan{\`{o}} and
                  Paolo D'Onorio De Meo and
                  Sabino Liuni and
                  Michael Sammeth and
                  Ernesto Picardi and
                  Graziano Pesole},
  title        = {Bioinformatics approaches for genomics and post genomics applications
                  of next-generation sequencing},
  journal      = {Briefings Bioinform.},
  volume       = {11},
  number       = {2},
  pages        = {181--197},
  year         = {2010},
  url          = {https://doi.org/10.1093/bib/bbp046},
  doi          = {10.1093/BIB/BBP046},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/HornerPCMLSPP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChianiINPDMC09,
  author       = {Francesco Chiani and
                  Camilla Iannone and
                  Rodolfo Negri and
                  Daniele Paoletti and
                  Mattia D'Antonio and
                  Paolo D'Onorio De Meo and
                  Tiziana Castrignan{\`{o}}},
  title        = {Radiation Genes: a database devoted to microarrays screenings revealing
                  transcriptome alterations induced by ionizing radiation in mammalian
                  cells},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2009},
  year         = {2009},
  url          = {https://doi.org/10.1093/database/bap007},
  doi          = {10.1093/DATABASE/BAP007},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/ChianiINPDMC09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/MeoCDDLMPA08,
  author       = {Paolo D'Onorio De Meo and
                  Danilo Carrabino and
                  Mattia D'Antonio and
                  Annarita D'Addabbo and
                  Sabino Liuni and
                  Flavio Mignone and
                  Graziano Pesole and
                  Nicola Ancona},
  title        = {{HT-RLS:} High-Throughput Web Tool for Analysis of {DNA} Microarray
                  Data Using {RLS} classifiers},
  booktitle    = {8th {IEEE} International Symposium on Cluster Computing and the Grid
                  (CCGrid 2008), 19-22 May 2008, Lyon, France},
  pages        = {747--752},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/CCGRID.2008.108},
  doi          = {10.1109/CCGRID.2008.108},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ccgrid/MeoCDDLMPA08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CastrignanoMCOFT07,
  author       = {Tiziana Castrignan{\`{o}} and
                  Paolo D'Onorio De Meo and
                  Danilo Carrabino and
                  Massimiliano Orsini and
                  Matteo Floris and
                  Anna Tramontano},
  title        = {The {MEPS} server for identifying protein conformational epitopes},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  number       = {{S-1}},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-S1-S6},
  doi          = {10.1186/1471-2105-8-S1-S6},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/CastrignanoMCOFT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fgcs/MeoCSCGLLRMP07,
  author       = {Paolo D'Onorio De Meo and
                  Danilo Carrabino and
                  Nico Sanna and
                  Tiziana Castrignan{\`{o}} and
                  Giorgio Grillo and
                  Flavio Licciulli and
                  Sabino Liuni and
                  Matteo Re and
                  Flavio Mignone and
                  Graziano Pesole},
  title        = {A high performance grid-web service framework for the identification
                  of 'conserved sequence tags'},
  journal      = {Future Gener. Comput. Syst.},
  volume       = {23},
  number       = {3},
  pages        = {371--381},
  year         = {2007},
  url          = {https://doi.org/10.1016/j.future.2006.07.012},
  doi          = {10.1016/J.FUTURE.2006.07.012},
  timestamp    = {Wed, 19 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/fgcs/MeoCSCGLLRMP07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/CastrignanoMGLMTP06,
  author       = {Tiziana Castrignan{\`{o}} and
                  Paolo D'Onorio De Meo and
                  Giorgio Grillo and
                  Sabino Liuni and
                  Flavio Mignone and
                  Ivano Giuseppe Talamo and
                  Graziano Pesole},
  title        = {GenoMiner: a tool for genome-wide search of coding and non-coding
                  conserved sequence tags},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {4},
  pages        = {497--499},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/bti754},
  doi          = {10.1093/BIOINFORMATICS/BTI754},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/CastrignanoMGLMTP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CastrignanoMCTT06,
  author       = {Tiziana Castrignan{\`{o}} and
                  Paolo D'Onorio De Meo and
                  Domenico Cozzetto and
                  Ivano Giuseppe Talamo and
                  Anna Tramontano},
  title        = {The {PMDB} Protein Model Database},
  journal      = {Nucleic Acids Res.},
  volume       = {34},
  number       = {Database-Issue},
  pages        = {306--309},
  year         = {2006},
  url          = {https://doi.org/10.1093/nar/gkj105},
  doi          = {10.1093/NAR/GKJ105},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/CastrignanoMCTT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CastrignanoRTMABP06,
  author       = {Tiziana Castrignan{\`{o}} and
                  Raffaella Rizzi and
                  Ivano Giuseppe Talamo and
                  Paolo D'Onorio De Meo and
                  Anna Anselmo and
                  Paola Bonizzoni and
                  Graziano Pesole},
  title        = {{ASPIC:} a web resource for alternative splicing prediction and transcript
                  isoforms characterization},
  journal      = {Nucleic Acids Res.},
  volume       = {34},
  number       = {Web-Server-Issue},
  pages        = {440--443},
  year         = {2006},
  url          = {https://doi.org/10.1093/nar/gkl324},
  doi          = {10.1093/NAR/GKL324},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/CastrignanoRTMABP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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