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BibTeX records: Vsevolod J. Makeev
@article{DBLP:journals/bmcbi/EgorAMGEME24, author = {Guguchkin Egor and Kasianov Artem and Belenikin Maksim and Zobkova Gaukhar and Kosova Ekaterina and Vsevolod J. Makeev and Karpulevich Evgeny}, title = {Enhancing {SNV} identification in whole-genome sequencing data through the incorporation of known genetic variants into the minimap2 index}, journal = {{BMC} Bioinform.}, volume = {25}, number = {1}, pages = {238}, year = {2024}, url = {https://doi.org/10.1186/s12859-024-05862-y}, doi = {10.1186/S12859-024-05862-Y}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/EgorAMGEME24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/EgorAMGEME24a, author = {Guguchkin Egor and Kasianov Artem and Belenikin Maksim and Zobkova Gaukhar and Kosova Ekaterina and Vsevolod J. Makeev and Karpulevich Evgeny}, title = {Correction: Enhancing {SNV} identification in whole-genome sequencing data through the incorporation of known genetic variants into the minimap2 index}, journal = {{BMC} Bioinform.}, volume = {25}, number = {1}, pages = {268}, year = {2024}, url = {https://doi.org/10.1186/s12859-024-05892-6}, doi = {10.1186/S12859-024-05892-6}, timestamp = {Sun, 08 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/EgorAMGEME24a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BoytsovAAKBKAKY22, author = {Alexandr Boytsov and Sergey Abramov and Ariuna Z. Aiusheeva and Alexandra M. Kasianova and Eugene Baulin and Ivan A. Kuznetsov and Yurii S. Aulchenko and Semyon Kolmykov and Ivan S. Yevshin and Fedor A. Kolpakov and Ilya E. Vorontsov and Vsevolod J. Makeev and Ivan V. Kulakovskiy}, title = {{ANANASTRA:} annotation and enrichment analysis of allele-specific transcription factor binding at SNPs}, journal = {Nucleic Acids Res.}, volume = {50}, number = {{W1}}, pages = {51--56}, year = {2022}, url = {https://doi.org/10.1093/nar/gkac262}, doi = {10.1093/NAR/GKAC262}, timestamp = {Sun, 31 Mar 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/BoytsovAAKBKAKY22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KolmykovYKSKMKK21, author = {Semyon Kolmykov and Ivan S. Yevshin and Mikhail Kulyashov and Ruslan N. Sharipov and Yury V. Kondrakhin and Vsevolod J. Makeev and Ivan V. Kulakovskiy and Alexander E. Kel and Fedor A. Kolpakov}, title = {{GTRD:} an integrated view of transcription regulation}, journal = {Nucleic Acids Res.}, volume = {49}, number = {Database-Issue}, pages = {D104--D111}, year = {2021}, url = {https://doi.org/10.1093/nar/gkaa1057}, doi = {10.1093/NAR/GKAA1057}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KolmykovYKSKMKK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KulakovskiyVYSF18, author = {Ivan V. Kulakovskiy and Ilya E. Vorontsov and Ivan S. Yevshin and Ruslan N. Sharipov and Alla D. Fedorova and Eugene I. Rumynskiy and Yulia A. Medvedeva and Arturo Magana{-}Mora and Vladimir B. Bajic and Dmitri A. Papatsenko and Fedor A. Kolpakov and Vsevolod J. Makeev}, title = {{HOCOMOCO:} towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis}, journal = {Nucleic Acids Res.}, volume = {46}, number = {Database-Issue}, pages = {D252--D259}, year = {2018}, url = {https://doi.org/10.1093/nar/gkx1106}, doi = {10.1093/NAR/GKX1106}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KulakovskiyVYSF18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KulakovskiyVYSK16, author = {Ivan V. Kulakovskiy and Ilya E. Vorontsov and Ivan S. Yevshin and Anastasiia V. Soboleva and Artem S. Kasianov and Haitham Ashoor and Wail Ba{-}alawi and Vladimir B. Bajic and Yulia A. Medvedeva and Fedor A. Kolpakov and Vsevolod J. Makeev}, title = {{HOCOMOCO:} expansion and enhancement of the collection of transcription factor binding sites models}, journal = {Nucleic Acids Res.}, volume = {44}, number = {Database-Issue}, pages = {116--125}, year = {2016}, url = {https://doi.org/10.1093/nar/gkv1249}, doi = {10.1093/NAR/GKV1249}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KulakovskiyVYSK16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/VorontsovKKNM15, author = {Ilya E. Vorontsov and Ivan V. Kulakovskiy and Grigory Khimulya and Daria D. Nikolaeva and Vsevolod J. Makeev}, editor = {Oscar Pastor and Christine Sinoquet and Ana L. N. Fred and Hugo Gamboa and Dirk Elias}, title = {{PERFECTOS-APE} - Predicting Regulatory Functional Effect of SNPs by Approximate P-value Estimation}, booktitle = {{BIOINFORMATICS} 2015 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Lisbon, Portugal, 12-15 January, 2015}, pages = {102--108}, publisher = {SciTePress}, year = {2015}, timestamp = {Thu, 21 Jan 2021 13:58:22 +0100}, biburl = {https://dblp.org/rec/conf/biostec/VorontsovKKNM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nature/ConsortiumFKRB14, author = {The Fantom Consortium and RIKEN PMII and RIKEN CLST (DGT) and Alistair R. R. Forrest and Hideya Kawaji and Michael Rehli and J. Kenneth Baillie and Michiel J. L. de Hoon and Vanja Haberle and Timo Lassmann and Ivan V. Kulakovskiy and Marina Lizio and Masayoshi Itoh and Robin Andersson and Christopher J. Mungall and Terrence F. Meehan and Sebastian Schmeier and Nicolas Bertin and Mette J{\o}rgensen and Emmanuel Dimont and Erik Arner and Christian Schmidl and Ulf Schaefer and Yulia A. Medvedeva and Charles Plessy and Morana Vitezic and Jessica Severin and Colin A. M. Semple and Yuri Ishizu and Robert S. Young and Margherita Francescatto and Intikhab Alam and Davide Albanese and Gabriel M. Altschuler and Takahiro Arakawa and John A. C. Archer and Peter Arner and Magda Babina and Sarah Rennie and Piotr J. Balwierz and Anthony G. Beckhouse and Swati Pradhan{-}Bhatt and Judith A. Blake and Antje Blumenthal and Beatrice Bodega and Alessandro Bonetti and James Briggs and Frank Brombacher and A. Maxwell Burroughs and Andrea Califano and Carlo V. Cannistraci and Daniel Carbajo and Yun Chen and Marco Chierici and Yari Ciani and Hans Clevers and Emiliano Dalla and Carrie A. Davis and Michael Detmar and Alexander D. Diehl and Taeko Dohi and Finn Drabl{\o}s and Albert S. B. Edge and Matthias Edinger and Karl Ekwall and Mitsuhiro Endoh and Hideki Enomoto and Michela Fagiolini and Lynsey Fairbairn and Hai Fang and Mary C. Farach{-}Carson and Geoffrey J. Faulkner and Alexander V. Favorov and Malcolm E. Fisher and Martin C. Frith and Rie Fujita and Shiro Fukuda and Cesare Furlanello and Masaaki Furuno and Jun{-}ichi Furusawa and Teunis B. Geijtenbeek and Andrew P. Gibson and Thomas R. Gingeras and Daniel Goldowitz and Julian Gough and Sven Guhl and Reto Guler and Stefano Gustincich and Thomas J. Ha and Masahide Hamaguchi and Mitsuko Hara and Matthias Harbers and Jayson Harshbarger and Akira Hasegawa and Yuki Hasegawa and Takehiro Hashimoto and Meenhard Herlyn and Kelly J. Hitchens and Shannan J. Ho Sui and Oliver M. Hofmann and Ilka Hoof and Fumi Hori and Lukasz Huminiecki and Kei Iida and Tomokatsu Ikawa and Boris R. Jankovic and Hui Jia and Anagha Joshi and Giuseppe Jurman and Bogumil Kaczkowski and Chieko Kai and Kaoru Kaida and Ai Kaiho and Kazuhiro Kajiyama and Mutsumi Kanamori{-}Katayama and Artem S. Kasianov and Takeya Kasukawa and Shintaro Katayama and Sachi Kato and Shuji Kawaguchi and Hiroshi Kawamoto and Yuki I. Kawamura and Tsugumi Kawashima and Judith S. Kempfle and Tony J. Kenna and Juha Kere and Levon M. Khachigian and Toshio Kitamura and S. Peter Klinken and Alan J. Knox and Miki Kojima and Soichi Kojima and Naoto Kondo and Haruhiko Koseki and Shigeo Koyasu and Sarah Krampitz and Atsutaka Kubosaki and Andrew T. Kwon and Jeroen F. J. Laros and Weonju Lee and Andreas Lennartsson and Kang Li and Berit Lilje and Leonard Lipovich and Alan Mackay{-}Sim and Ri{-}ichiroh Manabe and Jessica Cara Mar and Benoit Marchand and Anthony Mathelier and Niklas Mejhert and Alison M. Meynert and Yosuke Mizuno and David A. de Lima Morais and Hiromasa Morikawa and Mitsuru Morimoto and Kazuyo Moro and Efthymios Motakis and Hozumi Motohashi and Christine Mummery and Mitsuyoshi Murata and Sayaka Nagao{-}Sato and Yutaka Nakachi and Fumio Nakahara and Toshiyuki Nakamura and Yukio Nakamura and Kenichi Nakazato and Erik van Nimwegen and Noriko Ninomiya and Hiromi Nishiyori and Shohei Noma and Tadasuke Nozaki and Soichi Ogishima and Naganari Ohkura and Hiroko Ohmiya and Hiroshi Ohno and Mitsuhiro Ohshima and Mariko Okada{-}Hatakeyama and Yasushi Okazaki and Valerio Orlando and Dmitry A. Ovchinnikov and Arnab Pain and Robert Passier and Margaret Patrikakis and Helena Persson and Silvano Piazza and James G. D. Prendergast and Owen J. L. Rackham and Jordan A. Ramilowski and Mamoon Rashid and Timothy Ravasi and Patrizia Rizzu and Marco Roncador and Sugata Roy and Morten B. Rye and Eri Saijyo and Antti Sajantila and Akiko Saka and Shimon Sakaguchi and Mizuho Sakai and Hiroki Sato and Hironori Sato and Suzana Savvi and Alka Saxena and Claudio Schneider and Erik A. Schultes and Gundula G. Schulze{-}Tanzil and Anita Schwegmann and Thierry Sengstag and Guojun Sheng and Hisashi Shimoji and Yishai Shimoni and Jay W. Shin and Christophe Simon and Daisuke Sugiyama and Takaaki Sugiyama and Masanori Suzuki and Naoko Suzuki and Rolf K. Swoboda and Peter A. C. 't Hoen and Michihira Tagami and Naoko Takahashi and Jun Takai and Hiroshi Tanaka and Hideki Tatsukawa and Zuotian Tatum and Mark Thompson and Hiroo Toyoda and Tetsuro Toyoda and Eivind Valen and Marc van de Wetering and Linda M. van den Berg and Roberto Verardo and Dipti Vijayan and Ilya E. Vorontsov and Wyeth W. Wasserman and Shoko Watanabe and Christine A. Wells and Louise N. Winteringham and Ernst Wolvetang and Emily J. Wood and Yoko Yamaguchi and Masayuki Yamamoto and Misako Yoneda and Yohei Yonekura and Shigehiro Yoshida and Susan E. Zabierowski and Peter G. Zhang and Xiaobei Zhao and Silvia Zucchelli and Kim M. Summers and Harukazu Suzuki and Carsten O. Daub and Jun Kawai and Peter Heutink and Winston Hide and Tom C. Freeman and Boris Lenhard and Vladimir B. Bajic and Martin S. Taylor and Vsevolod J. Makeev and Albin Sandelin and David A. Hume and Piero Carninci and Yoshihide Hayashizaki}, title = {A promoter-level mammalian expression atlas}, journal = {Nat.}, volume = {507}, number = {7493}, pages = {462--470}, year = {2014}, url = {https://doi.org/10.1038/nature13182}, doi = {10.1038/NATURE13182}, timestamp = {Tue, 21 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nature/ConsortiumFKRB14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/almob/VorontsovKM13, author = {Ilya E. Vorontsov and Ivan V. Kulakovskiy and Vsevolod J. Makeev}, title = {Jaccard index based similarity measure to compare transcription factor binding site models}, journal = {Algorithms Mol. Biol.}, volume = {8}, pages = {23}, year = {2013}, url = {https://doi.org/10.1186/1748-7188-8-23}, doi = {10.1186/1748-7188-8-23}, timestamp = {Fri, 13 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/almob/VorontsovKM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jbcb/KulakovskiyLOBVM13, author = {Ivan V. Kulakovskiy and Victor G. Levitsky and Dmitry Yu. Oshchepkov and Leonid Bryzgalov and Ilya E. Vorontsov and Vsevolod J. Makeev}, title = {From binding motifs in Chip-seq Data to Improved Models of transcription factor binding Sites}, journal = {J. Bioinform. Comput. Biol.}, volume = {11}, number = {1}, year = {2013}, url = {https://doi.org/10.1142/S0219720013400040}, doi = {10.1142/S0219720013400040}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jbcb/KulakovskiyLOBVM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KulakovskiyMSKVBM13, author = {Ivan V. Kulakovskiy and Yulia A. Medvedeva and Ulf Schaefer and Artem S. Kasianov and Ilya E. Vorontsov and Vladimir B. Bajic and Vsevolod J. Makeev}, title = {{HOCOMOCO:} a comprehensive collection of human transcription factor binding sites models}, journal = {Nucleic Acids Res.}, volume = {41}, number = {Database-Issue}, pages = {195--202}, year = {2013}, url = {https://doi.org/10.1093/nar/gks1089}, doi = {10.1093/NAR/GKS1089}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KulakovskiyMSKVBM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/KulakovskiyLOVM13, author = {Ivan V. Kulakovskiy and Victor G. Levitsky and Dmitry G. Oschepkov and Ilya E. Vorontsov and Vsevolod J. Makeev}, editor = {Pedro Fernandes and Jordi Sol{\'{e}}{-}Casals and Ana L. N. Fred and Hugo Gamboa}, title = {Learning Advanced {TFBS} Models from Chip-Seq Data - diChIPMunk: Effective Construction of Dinucleotide Positional Weight Matrices}, booktitle = {{BIOINFORMATICS} 2013 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Barcelona, Spain, 11 - 14 February, 2013}, pages = {146--150}, publisher = {SciTePress}, year = {2013}, timestamp = {Mon, 01 Feb 2016 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biostec/KulakovskiyLOVM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/FavorovMCMMMW12, author = {Alexander V. Favorov and Loris Mularoni and Leslie M. Cope and Yulia A. Medvedeva and Andrey A. Mironov and Vsevolod J. Makeev and Sarah J. Wheelan}, title = {Exploring Massive, Genome Scale Datasets with the GenometriCorr Package}, journal = {PLoS Comput. Biol.}, volume = {8}, number = {5}, year = {2012}, url = {https://doi.org/10.1371/journal.pcbi.1002529}, doi = {10.1371/JOURNAL.PCBI.1002529}, timestamp = {Thu, 10 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/ploscb/FavorovMCMMMW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/biostec/NilulovaFMM12, author = {Anna A. Nilulova and Alexander V. Favorov and Vsevolod J. Makeev and Andrey A. Mironov}, editor = {Jan Schier and Carlos Manuel B. A. Correia and Ana L. N. Fred and Hugo Gamboa}, title = {A Generalized Hidden Markov Model for Prediction of Cis-regulatory Modules in Eukaryote Genomes and Description of Their Internal Structure}, booktitle = {{BIOINFORMATICS} 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms, Vilamoura, Algarve, Portugal, 1 - 4 February, 2012}, pages = {34--41}, publisher = {SciTePress}, year = {2012}, timestamp = {Mon, 01 Feb 2016 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/biostec/NilulovaFMM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KulakovskiyBKEMEM11, author = {Ivan V. Kulakovskiy and A. A. Belostotsky and Artem S. Kasianov and Natalia G. Esipova and Yulia A. Medvedeva and I. A. Eliseeva and Vsevolod J. Makeev}, title = {A deeper look into transcription regulatory code by preferred pair distance templates for transcription factor binding sites}, journal = {Bioinform.}, volume = {27}, number = {19}, pages = {2621--2624}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr453}, doi = {10.1093/BIOINFORMATICS/BTR453}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/KulakovskiyBKEMEM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KulakovskiyBFM10, author = {Ivan V. Kulakovskiy and Valentina Boeva and Alexander V. Favorov and Vsevolod J. Makeev}, title = {Deep and wide digging for binding motifs in ChIP-Seq data}, journal = {Bioinform.}, volume = {26}, number = {20}, pages = {2622--2623}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btq488}, doi = {10.1093/BIOINFORMATICS/BTQ488}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KulakovskiyBFM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jbcb/RahmanovKUM10, author = {Sergei Rahmanov and Ivan V. Kulakovskiy and Leonid Uroshlev and Vsevolod J. Makeev}, title = {Empirical Potentials for ion Binding in proteins}, journal = {J. Bioinform. Comput. Biol.}, volume = {8}, number = {3}, pages = {427--435}, year = {2010}, url = {https://doi.org/10.1142/S0219720010004641}, doi = {10.1142/S0219720010004641}, timestamp = {Thu, 04 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jbcb/RahmanovKUM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KulakovskiyFM09, author = {Ivan V. Kulakovskiy and Alexander V. Favorov and Vsevolod J. Makeev}, title = {Motif discovery and motif finding from genome-mapped DNase footprint data}, journal = {Bioinform.}, volume = {25}, number = {18}, pages = {2318--2325}, year = {2009}, url = {https://doi.org/10.1093/bioinformatics/btp434}, doi = {10.1093/BIOINFORMATICS/BTP434}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/KulakovskiyFM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/almob/BoevaCRRM07, author = {Valentina Boeva and Julien Cl{\'{e}}ment and Mireille R{\'{e}}gnier and Mikhail A. Roytberg and Vsevolod J. Makeev}, title = {Exact p-value calculation for heterotypic clusters of regulatory motifs and its application in computational annotation of \emph{cis}-regulatory modules}, journal = {Algorithms Mol. Biol.}, volume = {2}, year = {2007}, url = {https://doi.org/10.1186/1748-7188-2-13}, doi = {10.1186/1748-7188-2-13}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/almob/BoevaCRRM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BoevaRPM06, author = {Valentina Boeva and Mireille R{\'{e}}gnier and Dmitri A. Papatsenko and Vsevolod J. Makeev}, title = {Short fuzzy tandem repeats in genomic sequences, identification, and possible role in regulation of gene expression}, journal = {Bioinform.}, volume = {22}, number = {6}, pages = {676--684}, year = {2006}, url = {https://doi.org/10.1093/bioinformatics/btk032}, doi = {10.1093/BIOINFORMATICS/BTK032}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/BoevaRPM06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FavorovGGRMM05, author = {Alexander V. Favorov and Mikhail S. Gelfand and Anna V. Gerasimova and Dmitry A. Ravcheev and Andrey A. Mironov and Vsevolod J. Makeev}, title = {A Gibbs sampler for identification of symmetrically structured, spaced {DNA} motifs with improved estimation of the signal length}, journal = {Bioinform.}, volume = {21}, number = {10}, pages = {2240--2245}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti336}, doi = {10.1093/BIOINFORMATICS/BTI336}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FavorovGGRMM05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/VandenbogaertM03, author = {Mathias Vandenbogaert and Vsevolod J. Makeev}, title = {Analysis of bacterial RM-Systems through genome-scale analysis and related taxonomic issues}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {127--143}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00083}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/VandenbogaertM03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/isb/KalininaMSGR03, author = {Olga V. Kalinina and Vsevolod J. Makeev and Roman A. Sutormin and Mikhail S. Gelfand and Aleksandra B. Rakhmaninova}, title = {The channel in transporters is formed by residues that are rare in transmembrane helices}, journal = {Silico Biol.}, volume = {3}, number = {1-2}, pages = {197--204}, year = {2003}, url = {http://content.iospress.com/articles/in-silico-biology/isb00088}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/isb/KalininaMSGR03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RamenskyMRT01, author = {Vasily Ramensky and Vsevolod J. Makeev and Mikhail A. Roytberg and Vladimir G. Tumanyan}, title = {Segmentation of long genomic sequences into domains with homogeneous composition with {BASIO} software}, journal = {Bioinform.}, volume = {17}, number = {11}, pages = {1065--1066}, year = {2001}, url = {https://doi.org/10.1093/bioinformatics/17.11.1065}, doi = {10.1093/BIOINFORMATICS/17.11.1065}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/RamenskyMRT01.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/RamenskyMRT00, author = {Vasily Ramensky and Vsevolod J. Makeev and Mikhail A. Roytberg and Vladimir G. Tumanyan}, title = {{DNA} Segmentation Through the Bayesian Approach}, journal = {J. Comput. Biol.}, volume = {7}, number = {1-2}, pages = {215--231}, year = {2000}, url = {https://doi.org/10.1089/10665270050081487}, doi = {10.1089/10665270050081487}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcb/RamenskyMRT00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/RegnierLM00, author = {Mireille R{\'{e}}gnier and Alexandre Lifanov and Vsevolod J. Makeev}, editor = {Erich Bornberg{-}Bauer and Ursula Rost and Jens Stoye}, title = {Three Variations on Word Counting}, booktitle = {Proceedings of the German Conference on Bioinformatics {(GCB} 2000), Heidelberg, October 5-7, 2000}, pages = {75--82}, publisher = {Logos Verlag}, year = {2000}, timestamp = {Mon, 01 Feb 2016 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gcb/RegnierLM00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/jobim/MakeevRGRT00, author = {Vsevolod J. Makeev and Vasily Ramensky and Mikhail S. Gelfand and Mikhail A. Roytberg and Vladimir G. Tumanyan}, editor = {Olivier Gascuel and Marie{-}France Sagot}, title = {Bayesian Approach to {DNA} Segmentation into Regions with Different Average Nucleotide Composition}, booktitle = {Computational Biology, First International Conference on Biology, Informatics, and Mathematics, {JOBIM} 2000, Montpellier, France, May 3-5, 2000, Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {2066}, pages = {57--73}, publisher = {Springer}, year = {2000}, url = {https://doi.org/10.1007/3-540-45727-5\_6}, doi = {10.1007/3-540-45727-5\_6}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/jobim/MakeevRGRT00.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MakeevT96, author = {Vsevolod J. Makeev and Vladimir G. Tumanyan}, title = {Search of periodicities in primary structure of biopolymers: a general Fourier approach}, journal = {Comput. Appl. Biosci.}, volume = {12}, number = {1}, pages = {49--54}, year = {1996}, url = {https://doi.org/10.1093/bioinformatics/12.1.49}, doi = {10.1093/BIOINFORMATICS/12.1.49}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/MakeevT96.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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