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BibTeX records: Jim Zhanwen Li

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

> Home > Persons > Jim Zhanwen Li

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@article{DBLP:journals/nar/LiJISG20,
  author       = {Zhanwen Li and
                  Lukasz Jaroszewski and
                  Mallika Iyer and
                  Mayya Sedova and
                  Adam Godzik},
  title        = {{FATCAT} 2.0: towards a better understanding of the structural diversity
                  of proteins},
  journal      = {Nucleic Acids Res.},
  volume       = {48},
  number       = {Webserver-Issue},
  pages        = {W60--W64},
  year         = {2020},
  url          = {https://doi.org/10.1093/nar/gkaa443},
  doi          = {10.1093/NAR/GKAA443},
  timestamp    = {Tue, 01 Jun 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LiJISG20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/SedovaILJPHPG19,
  author       = {Mayya Sedova and
                  Mallika Iyer and
                  Zhanwen Li and
                  Lukasz Jaroszewski and
                  Kai W. Post and
                  Thomas Hrabe and
                  Eduard Porta{-}Pardo and
                  Adam Godzik},
  title        = {Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations
                  in cancer subsets},
  journal      = {Nucleic Acids Res.},
  volume       = {47},
  number       = {Database-Issue},
  pages        = {D895--D899},
  year         = {2019},
  url          = {https://doi.org/10.1093/nar/gky1098},
  doi          = {10.1093/NAR/GKY1098},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SedovaILJPHPG19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/tcc/LiWCL17,
  author       = {Jim Zhanwen Li and
                  C. Murray Woodside and
                  John W. Chinneck and
                  Marin Litoiu},
  title        = {Adaptive Cloud Deployment Using Persistence Strategies and Application
                  Awareness},
  journal      = {{IEEE} Trans. Cloud Comput.},
  volume       = {5},
  number       = {2},
  pages        = {277--290},
  year         = {2017},
  url          = {https://doi.org/10.1109/TCC.2015.2409873},
  doi          = {10.1109/TCC.2015.2409873},
  timestamp    = {Mon, 01 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcc/LiWCL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/HrabeLSRJG16,
  author       = {Thomas Hrabe and
                  Zhanwen Li and
                  Mayya Sedova and
                  Piotr Rotkiewicz and
                  Lukasz Jaroszewski and
                  Adam Godzik},
  title        = {PDBFlex: exploring flexibility in protein structures},
  journal      = {Nucleic Acids Res.},
  volume       = {44},
  number       = {Database-Issue},
  pages        = {423--428},
  year         = {2016},
  url          = {https://doi.org/10.1093/nar/gkv1316},
  doi          = {10.1093/NAR/GKV1316},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/HrabeLSRJG16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/XuJLG15,
  author       = {Dong Xu and
                  Lukasz Jaroszewski and
                  Zhanwen Li and
                  Adam Godzik},
  title        = {{AIDA:} \emph{ab initio} domain assembly for automated multi-domain
                  protein structure prediction and domain-domain interaction prediction},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {13},
  pages        = {2098--2105},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btv092},
  doi          = {10.1093/BIOINFORMATICS/BTV092},
  timestamp    = {Wed, 30 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XuJLG15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/XuJLG14,
  author       = {Dong Xu and
                  Lukasz Jaroszewski and
                  Zhanwen Li and
                  Adam Godzik},
  title        = {{FFAS-3D:} improving fold recognition by including optimized structural
                  features and template re-ranking},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {5},
  pages        = {660--667},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btt578},
  doi          = {10.1093/BIOINFORMATICS/BTT578},
  timestamp    = {Wed, 30 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/XuJLG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/SheydinaERCLZAG14,
  author       = {Anna Sheydina and
                  Ruth Y. Eberhardt and
                  Daniel J. Rigden and
                  Yuanyuan Chang and
                  Zhanwen Li and
                  Christian M. Zmasek and
                  Herbert L. Axelrod and
                  Adam Godzik},
  title        = {Structural genomics analysis of uncharacterized protein families overrepresented
                  in human gut bacteria identifies a novel glycoside hydrolase},
  journal      = {{BMC} Bioinform.},
  volume       = {15},
  pages        = {112},
  year         = {2014},
  url          = {https://doi.org/10.1186/1471-2105-15-112},
  doi          = {10.1186/1471-2105-15-112},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/SheydinaERCLZAG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/EroshkinLWPLRBBG14,
  author       = {Alexey M. Eroshkin and
                  Andrew LeBlanc and
                  Dana Weekes and
                  Kai W. Post and
                  Zhanwen Li and
                  Akhil Rajput and
                  Sal T. Butera and
                  Dennis R. Burton and
                  Adam Godzik},
  title        = {bNAber: database of broadly neutralizing {HIV} antibodies},
  journal      = {Nucleic Acids Res.},
  volume       = {42},
  number       = {Database-Issue},
  pages        = {1133--1139},
  year         = {2014},
  url          = {https://doi.org/10.1093/nar/gkt1083},
  doi          = {10.1093/NAR/GKT1083},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/EroshkinLWPLRBBG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/LiNYHG14,
  author       = {Zhanwen Li and
                  Padmaja Natarajan and
                  Yuzhen Ye and
                  Thomas Hrabe and
                  Adam Godzik},
  title        = {{POSA:} a user-driven, interactive multiple protein structure alignment
                  server},
  journal      = {Nucleic Acids Res.},
  volume       = {42},
  number       = {Webserver-Issue},
  pages        = {240--245},
  year         = {2014},
  url          = {https://doi.org/10.1093/nar/gku394},
  doi          = {10.1093/NAR/GKU394},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LiNYHG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/XuJLG14,
  author       = {Dong Xu and
                  Lukasz Jaroszewski and
                  Zhanwen Li and
                  Adam Godzik},
  title        = {{AIDA:} \emph{ab initio} domain assembly server},
  journal      = {Nucleic Acids Res.},
  volume       = {42},
  number       = {Webserver-Issue},
  pages        = {308--313},
  year         = {2014},
  url          = {https://doi.org/10.1093/nar/gku369},
  doi          = {10.1093/NAR/GKU369},
  timestamp    = {Wed, 30 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/XuJLG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/IEEEcloud/LiLZBXSBL13,
  author       = {Jim Zhanwen Li and
                  Qinghua Lu and
                  Liming Zhu and
                  Len Bass and
                  Xiwei Xu and
                  Sherif Sakr and
                  Paul L. Bannerman and
                  Anna Liu},
  title        = {Improving Availability of Cloud-Based Applications through Deployment
                  Choices},
  booktitle    = {2013 {IEEE} Sixth International Conference on Cloud Computing, Santa
                  Clara, CA, USA, June 28 - July 3, 2013},
  pages        = {43--50},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/CLOUD.2013.83},
  doi          = {10.1109/CLOUD.2013.83},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/IEEEcloud/LiLZBXSBL13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/IEEEcloud/LuXZBLSBL13,
  author       = {Qinghua Lu and
                  Xiwei Xu and
                  Liming Zhu and
                  Len Bass and
                  Zhanwen Li and
                  Sherif Sakr and
                  Paul L. Bannerman and
                  Anna Liu},
  title        = {Incorporating Uncertainty into In-Cloud Application Deployment Decisions
                  for Availability},
  booktitle    = {2013 {IEEE} Sixth International Conference on Cloud Computing, Santa
                  Clara, CA, USA, June 28 - July 3, 2013},
  pages        = {454--461},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/CLOUD.2013.87},
  doi          = {10.1109/CLOUD.2013.87},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/IEEEcloud/LuXZBLSBL13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/dsn/XuZLBLF13,
  author       = {Xiwei Xu and
                  Liming Zhu and
                  Jim Zhanwen Li and
                  Len Bass and
                  Qinghua Lu and
                  Min Fu},
  title        = {Modeling and analysing operation processes for dependability},
  booktitle    = {2013 43rd Annual {IEEE/IFIP} International Conference on Dependable
                  Systems and Networks (DSN), Budapest, Hungary, June 24-27, 2013},
  pages        = {1--2},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/DSN.2013.6575337},
  doi          = {10.1109/DSN.2013.6575337},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/dsn/XuZLBLF13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/isarcs/XuLZLSWW13,
  author       = {Xiwei Xu and
                  Qinghua Lu and
                  Liming Zhu and
                  Zhanwen Li and
                  Sherif Sakr and
                  Hiroshi Wada and
                  Ingo Weber},
  editor       = {Philippe Kruchten and
                  Sam Malek},
  title        = {Availability analysis for deployment of in-cloud applications},
  booktitle    = {Proceedings of the 4th international {ACM} Sigsoft symposium on Architecting
                  critical systems, {ISARCS} 2013, Vancouver, BC, Canada, June 17-21,
                  2013},
  pages        = {11--16},
  publisher    = {{ACM}},
  year         = {2013},
  url          = {https://doi.org/10.1145/2465470.2465472},
  doi          = {10.1145/2465470.2465472},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/isarcs/XuLZLSWW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/lisa/LiHZXFBLT13,
  author       = {Jim Zhanwen Li and
                  Siyuan He and
                  Liming Zhu and
                  Xiwei Xu and
                  Min Fu and
                  Len Bass and
                  Anna Liu and
                  An Binh Tran},
  editor       = {Narayan Desai and
                  Kent Skaar},
  title        = {Challenges to Error Diagnosis in Hadoop Ecosystems},
  booktitle    = {Lucky {LISA:} Proceedings of the 27th Large Installation System Administration
                  Conference, {LISA} 2013, Washington, DC, USA, November 3-8, 2013},
  pages        = {145--154},
  publisher    = {{USENIX} Association},
  year         = {2013},
  url          = {https://www.usenix.org/conference/lisa13/technical-sessions/presentation/li},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/lisa/LiHZXFBLT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/qosa/LuZBXLW13,
  author       = {Qinghua Lu and
                  Liming Zhu and
                  Len Bass and
                  Xiwei Xu and
                  Zhanwen Li and
                  Hiroshi Wada},
  editor       = {Philippe Kruchten and
                  Anne Koziolek and
                  Robert L. Nord},
  title        = {Cloud {API} issues: an empirical study and impact},
  booktitle    = {Proceedings of the 9th international {ACM} {SIGSOFT} conference on
                  Quality of Software Architectures, QoSA 2013, part of Comparch '13
                  Federated Events on Component-Based Software Engineering and Software
                  Architecture, Vancouver, BC, Canada, June 17-21, 2013},
  pages        = {23--32},
  publisher    = {{ACM}},
  year         = {2013},
  url          = {https://doi.org/10.1145/2465478.2465481},
  doi          = {10.1145/2465478.2465481},
  timestamp    = {Sat, 27 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/qosa/LuZBXLW13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/JaroszewskiLCWG11,
  author       = {Lukasz Jaroszewski and
                  Zhanwen Li and
                  Xiao{-}hui Cai and
                  Christoph Weber and
                  Adam Godzik},
  title        = {{FFAS} server: novel features and applications},
  journal      = {Nucleic Acids Res.},
  volume       = {39},
  number       = {Web-Server-Issue},
  pages        = {38--44},
  year         = {2011},
  url          = {https://doi.org/10.1093/nar/gkr441},
  doi          = {10.1093/NAR/GKR441},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/JaroszewskiLCWG11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/IEEEcloud/LiCWL09,
  author       = {Jim Zhanwen Li and
                  John W. Chinneck and
                  C. Murray Woodside and
                  Marin Litoiu},
  title        = {Deployment of Services in a Cloud Subject to Memory and License Constraints},
  booktitle    = {{IEEE} International Conference on Cloud Computing, {CLOUD} 2009,
                  Bangalore, India, 21-25 September, 2009},
  pages        = {33--40},
  publisher    = {{IEEE} Computer Society},
  year         = {2009},
  url          = {https://doi.org/10.1109/CLOUD.2009.62},
  doi          = {10.1109/CLOUD.2009.62},
  timestamp    = {Mon, 01 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/IEEEcloud/LiCWL09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/icac/LiCWL09,
  author       = {Jim Zhanwen Li and
                  John W. Chinneck and
                  C. Murray Woodside and
                  Marin Litoiu},
  editor       = {Simon A. Dobson and
                  John Strassner and
                  Manish Parashar and
                  Onn Shehory},
  title        = {Fast scalable optimization to configure service systems having cost
                  and quality of service constraints},
  booktitle    = {Proceedings of the 6th International Conference on Autonomic Computing,
                  {ICAC} 2009, June 15-19, 2009, Barcelona, Spain},
  pages        = {159--168},
  publisher    = {{ACM}},
  year         = {2009},
  url          = {https://doi.org/10.1145/1555228.1555268},
  doi          = {10.1145/1555228.1555268},
  timestamp    = {Mon, 01 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icac/LiCWL09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/FriedbergHKSLG07,
  author       = {Iddo Friedberg and
                  Tim Harder and
                  Rachel Kolodny and
                  Einat Sitbon and
                  Zhanwen Li and
                  Adam Godzik},
  title        = {Using an alignment of fragment strings for comparing protein structures},
  journal      = {Bioinform.},
  volume       = {23},
  number       = {2},
  pages        = {219--224},
  year         = {2007},
  url          = {https://doi.org/10.1093/bioinformatics/btl310},
  doi          = {10.1093/BIOINFORMATICS/BTL310},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/FriedbergHKSLG07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/aswec/LiLCZ07,
  author       = {Zhanwen Li and
                  David Levy and
                  Shiping Chen and
                  John Zic},
  title        = {Explicitly Controlling the Fair Service for Busy Web Servers},
  booktitle    = {18th Australian Software Engineering Conference {(ASWEC} 2007), April
                  10-13, 2007, Melbourne, Australia},
  pages        = {159--168},
  publisher    = {{IEEE} Computer Society},
  year         = {2007},
  url          = {https://doi.org/10.1109/ASWEC.2007.21},
  doi          = {10.1109/ASWEC.2007.21},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aswec/LiLCZ07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/LiYG06,
  author       = {Zhanwen Li and
                  Yuzhen Ye and
                  Adam Godzik},
  title        = {Flexible Structural Neighborhood - a database of protein structural
                  similarities and alignments},
  journal      = {Nucleic Acids Res.},
  volume       = {34},
  number       = {Database-Issue},
  pages        = {277--280},
  year         = {2006},
  url          = {https://doi.org/10.1093/nar/gkj124},
  doi          = {10.1093/NAR/GKJ124},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/LiYG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/middleware/LiLCZ06,
  author       = {Zhanwen Li and
                  David Levy and
                  Shiping Chen and
                  John Zic},
  editor       = {Ian Gorton and
                  Liming Zhu and
                  Yan Liu and
                  Shiping Chen},
  title        = {Auto-tune design and evaluation on staged event-driven architecture},
  booktitle    = {Proceedings of the 1st workshop on MOdel Driven Development for Middleware,
                  {MODDM} 2006, Melbourne, Australia, November 27 - December 1, 2006},
  series       = {{ACM} International Conference Proceeding Series},
  volume       = {183},
  pages        = {1--6},
  publisher    = {{ACM}},
  year         = {2006},
  url          = {https://doi.org/10.1145/1169086.1169089},
  doi          = {10.1145/1169086.1169089},
  timestamp    = {Thu, 29 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/middleware/LiLCZ06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/psb/YeLG06,
  author       = {Yuzhen Ye and
                  Zhanwen Li and
                  Adam Godzik},
  editor       = {Russ B. Altman and
                  Tiffany Murray and
                  Teri E. Klein and
                  A. Keith Dunker and
                  Lawrence Hunter},
  title        = {Modeling and Analyzing Three-Dimensional Structures of Human Disease
                  Proteins},
  booktitle    = {Biocomputing 2006, Proceedings of the Pacific Symposium, Maui, Hawaii,
                  USA, 3-7 January 2006},
  pages        = {439--450},
  publisher    = {World Scientific},
  year         = {2006},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb06/ye.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/YeLG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/JaroszewskiRLLG05,
  author       = {Lukasz Jaroszewski and
                  Leszek Rychlewski and
                  Zhanwen Li and
                  Weizhong Li and
                  Adam Godzik},
  title        = {{FFAS03:} a server for profile-profile sequence alignments},
  journal      = {Nucleic Acids Res.},
  volume       = {33},
  number       = {Web-Server-Issue},
  pages        = {284--288},
  year         = {2005},
  url          = {https://doi.org/10.1093/nar/gki418},
  doi          = {10.1093/NAR/GKI418},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/JaroszewskiRLLG05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ijcm/GuZL03,
  author       = {Gui{-}Ding Gu and
                  Jian{-}Jun Zhang and
                  Zhanwen Li},
  title        = {Restarted {GMRES} Augmented with Eigenvectors for Shifted Linear Systems},
  journal      = {Int. J. Comput. Math.},
  volume       = {80},
  number       = {8},
  pages        = {1037--1047},
  year         = {2003},
  url          = {https://doi.org/10.1080/0020716031000103330},
  doi          = {10.1080/0020716031000103330},
  timestamp    = {Tue, 16 Jan 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcm/GuZL03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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