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ORCIDBibTeX records: Michael D. Hendy
@article{DBLP:journals/tcbb/MatroudTH22,
author = {Atheer A. Matroud and
Christopher P. Tuffley and
Michael D. Hendy},
title = {An Asymmetric Alignment Algorithm for Estimating Ancestor-Descendant
Edit Distance for Tandem Repeats},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {19},
number = {4},
pages = {2080--2091},
year = {2022},
url = {https://doi.org/10.1109/TCBB.2021.3059239},
doi = {10.1109/TCBB.2021.3059239},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/MatroudTH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wob/MatroudTBH12,
author = {Atheer A. Matroud and
Christopher P. Tuffley and
David Bryant and
Michael D. Hendy},
editor = {Marc{\'{\i}}lio Carlos Pereira de Souto and
Maricel G. Kann},
title = {A Comparison of Three Heuristic Methods for Solving the Parsing Problem
for Tandem Repeats},
booktitle = {Advances in Bioinformatics and Computational Biology - 7th Brazilian
Symposium on Bioinformatics, {BSB} 2012, Campo Grande, Brazil, August
15-17, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7409},
pages = {37--48},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-31927-3\_4},
doi = {10.1007/978-3-642-31927-3\_4},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wob/MatroudTBH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MatroudTH11,
author = {Atheer A. Matroud and
Christopher P. Tuffley and
Michael D. Hendy},
title = {An Algorithm to Solve the Motif Alignment Problem for Approximate
Nested Tandem Repeats in Biological Sequences},
journal = {J. Comput. Biol.},
volume = {18},
number = {9},
pages = {1211--1218},
year = {2011},
url = {https://doi.org/10.1089/cmb.2011.0101},
doi = {10.1089/CMB.2011.0101},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/MatroudTH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/MatroudHT10,
author = {Atheer A. Matroud and
Michael D. Hendy and
Christopher P. Tuffley},
editor = {Eric Tannier},
title = {An Algorithm to Solve the Motif Alignment Problem for Approximate
Nested Tandem Repeats},
booktitle = {Comparative Genomics - International Workshop, {RECOMB-CG} 2010, Ottawa,
Canada, October 9-11, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6398},
pages = {188--197},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16181-0\_16},
doi = {10.1007/978-3-642-16181-0\_16},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/MatroudHT10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WhiteH08,
author = {W. Timothy J. White and
Michael D. Hendy},
title = {Compressing {DNA} sequence databases with coil},
journal = {{BMC} Bioinform.},
volume = {9},
year = {2008},
url = {https://doi.org/10.1186/1471-2105-9-242},
doi = {10.1186/1471-2105-9-242},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WhiteH08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HendyS08,
author = {Michael D. Hendy and
Sagi Snir},
title = {Hadamard Conjugation for the Kimura 3ST Model: Combinatorial Proof
Using Path Sets},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {5},
number = {3},
pages = {461--471},
year = {2008},
url = {https://doi.org/10.1109/TCBB.2007.70227},
doi = {10.1109/TCBB.2007.70227},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/HendyS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/ChorHP07,
author = {Benny Chor and
Michael D. Hendy and
David Penny},
title = {Analytic solutions for three taxon {ML} trees with variable rates
across sites},
journal = {Discret. Appl. Math.},
volume = {155},
number = {6-7},
pages = {750--758},
year = {2007},
url = {https://doi.org/10.1016/j.dam.2005.05.043},
doi = {10.1016/J.DAM.2005.05.043},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/ChorHP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/ox/07/Hendy07,
author = {Michael D. Hendy},
editor = {Olivier Gascuel},
title = {Hadamard conjugation: an analytic tool for phylogenetics},
booktitle = {Mathematics of Evolution and Phylogeny},
publisher = {Oxford University Press},
year = {2007},
timestamp = {Wed, 06 May 2020 15:31:00 +0200},
biburl = {https://dblp.org/rec/books/ox/07/Hendy07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ajc/DongHTL04,
author = {Feng Ming Dong and
Michael D. Hendy and
Kee L. Teo and
Charles H. C. Little},
title = {Graph-functions associated with an edge-property},
journal = {Australas. {J} Comb.},
volume = {30},
pages = {3--20},
year = {2004},
url = {http://ajc.maths.uq.edu.au/pdf/30/ajc\_v30\_p003.pdf},
timestamp = {Wed, 11 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ajc/DongHTL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/combinatorics/DongTLHK04,
author = {Feng Ming Dong and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy and
Khee Meng Koh},
title = {Chromatically Unique Multibridge Graphs},
journal = {Electron. J. Comb.},
volume = {11},
number = {1},
year = {2004},
url = {https://doi.org/10.37236/1765},
doi = {10.37236/1765},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/combinatorics/DongTLHK04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ismb/WoodhamsH04,
author = {M. D. Woodhams and
Michael D. Hendy},
title = {Reconstructing phylogeny by Quadratically Approximated Maximum Likelihood},
booktitle = {Proceedings Twelfth International Conference on Intelligent Systems
for Molecular Biology/Third European Conference on Computational Biology
2004, Glasgow, UK, July 31-August 4, 2004},
pages = {348--354},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth926},
doi = {10.1093/BIOINFORMATICS/BTH926},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ismb/WoodhamsH04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/EdvardssonGPHPM03,
author = {Sverker Edvardsson and
Paul P. Gardner and
Anthony M. Poole and
Michael D. Hendy and
David Penny and
Vincent Moulton},
title = {A Search for {H/ACA} SnoRNAs in Yeast Using {MFE} Secondary Structure
Prediction},
journal = {Bioinform.},
volume = {19},
number = {7},
pages = {865--873},
year = {2003},
url = {https://doi.org/10.1093/bioinformatics/btg080},
doi = {10.1093/BIOINFORMATICS/BTG080},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/EdvardssonGPHPM03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccb/HendyH03,
author = {Michael D. Hendy and
Barbara R. Holland},
title = {Upper bounds on maximum likelihood for phylogenetic trees},
booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB}
2003), September 27-30, 2003, Paris, France},
pages = {66--72},
year = {2003},
timestamp = {Mon, 27 Oct 2003 15:56:17 +0100},
biburl = {https://dblp.org/rec/conf/eccb/HendyH03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ajc/DongTLH02,
author = {Feng Ming Dong and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy},
title = {Two invariants for adjointly equivalent graphs},
journal = {Australas. {J} Comb.},
volume = {25},
pages = {133--144},
year = {2002},
url = {http://ajc.maths.uq.edu.au/pdf/25/ajc-v25-p133.pdf},
timestamp = {Wed, 11 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ajc/DongTLH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ajc/DongTLH02a,
author = {Feng Ming Dong and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy},
title = {Zeros of adjoint polynomials of paths and cycles},
journal = {Australas. {J} Comb.},
volume = {25},
pages = {167--174},
year = {2002},
url = {http://ajc.maths.uq.edu.au/pdf/25/ajc-v25-p167.pdf},
timestamp = {Wed, 11 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ajc/DongTLH02a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/DongTKH02,
author = {Feng Ming Dong and
Kee L. Teo and
Khee Meng Koh and
Michael D. Hendy},
title = {Non-chordal graphs having integral-root chromatic polynomials {II}},
journal = {Discret. Math.},
volume = {245},
number = {1-3},
pages = {247--253},
year = {2002},
url = {https://doi.org/10.1016/S0012-365X(01)00307-7},
doi = {10.1016/S0012-365X(01)00307-7},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/DongTKH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/DongHTL02,
author = {Feng Ming Dong and
Michael D. Hendy and
Kee L. Teo and
Charles H. C. Little},
title = {The vertex-cover polynomial of a graph},
journal = {Discret. Math.},
volume = {250},
number = {1-3},
pages = {71--78},
year = {2002},
url = {https://doi.org/10.1016/S0012-365X(01)00272-2},
doi = {10.1016/S0012-365X(01)00272-2},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/DongHTL02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/DongTLH02,
author = {Feng Ming Dong and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy},
title = {Chromaticity of some families of dense graphs},
journal = {Discret. Math.},
volume = {258},
number = {1-3},
pages = {303--321},
year = {2002},
url = {https://doi.org/10.1016/S0012-365X(02)00355-2},
doi = {10.1016/S0012-365X(02)00355-2},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/DongTLH02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jgt/DongKTLH01,
author = {Feng Ming Dong and
Khee Meng Koh and
Kee L. Teo and
C. H. C. Little and
Michael D. Hendy},
title = {Sharp bounds for the number of 3-independent partitions and the chromaticity
of bipartite graphs},
journal = {J. Graph Theory},
volume = {37},
number = {1},
pages = {48--77},
year = {2001},
url = {https://doi.org/10.1002/jgt.1003},
doi = {10.1002/JGT.1003},
timestamp = {Fri, 02 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jgt/DongKTLH01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/ChorHP01,
author = {Benny Chor and
Michael D. Hendy and
David Penny},
editor = {Olivier Gascuel and
Bernard M. E. Moret},
title = {Analytic Solutions for Three-Taxon ML\({}_{\mbox{MC}}\) Trees with
Variable Rates Across Sites},
booktitle = {Algorithms in Bioinformatics, First International Workshop, {WABI}
2001, Aarhus, Denmark, August 28-31, 2001, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2149},
pages = {204--213},
publisher = {Springer},
year = {2001},
url = {https://doi.org/10.1007/3-540-44696-6\_16},
doi = {10.1007/3-540-44696-6\_16},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/ChorHP01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/DongKTLH00,
author = {Feng Ming Dong and
Khee Meng Koh and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy},
title = {An attempt to classify bipartite graphs by chromatic polynomials},
journal = {Discret. Math.},
volume = {222},
number = {1-3},
pages = {73--88},
year = {2000},
url = {https://doi.org/10.1016/S0012-365X(00)00007-8},
doi = {10.1016/S0012-365X(00)00007-8},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/DongKTLH00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/DongKTH00,
author = {Feng Ming Dong and
Khee Meng Koh and
Kee L. Teo and
Charles H. C. Little and
Michael D. Hendy},
title = {Chromatically unique bipartite graphs with low 3-independent partition
numbers},
journal = {Discret. Math.},
volume = {224},
number = {1-3},
pages = {107--124},
year = {2000},
url = {https://doi.org/10.1016/S0012-365X(00)00094-7},
doi = {10.1016/S0012-365X(00)00094-7},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/DongKTH00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChorHHP00,
author = {Benny Chor and
Michael D. Hendy and
Barbara R. Holland and
David Penny},
editor = {Ron Shamir and
Satoru Miyano and
Sorin Istrail and
Pavel A. Pevzner and
Michael S. Waterman},
title = {Multiple maxima of likelihood in phylogenetic trees: an analytic approach},
booktitle = {Proceedings of the Fourth Annual International Conference on Computational
Molecular Biology, {RECOMB} 2000, Tokyo, Japan, April 8-11, 2000},
pages = {108--117},
publisher = {{ACM}},
year = {2000},
url = {https://doi.org/10.1145/332306.332353},
doi = {10.1145/332306.332353},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/ChorHHP00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/SteelHP98,
author = {Mike A. Steel and
Michael D. Hendy and
David Penny},
title = {Reconstructing Phylogenies From Nucleotide Pattern Probabilities:
{A} Survey and some New Results},
journal = {Discret. Appl. Math.},
volume = {88},
number = {1-3},
pages = {367--396},
year = {1998},
url = {https://doi.org/10.1016/S0166-218X(98)00080-8},
doi = {10.1016/S0166-218X(98)00080-8},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dam/SteelHP98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HendyP96,
author = {Michael D. Hendy and
David Penny},
title = {Complete Families of Linear Invariants for Some Stochastic Models
of Sequence Evolution, with and without Molecular Clock Assumption},
journal = {J. Comput. Biol.},
volume = {3},
number = {1},
pages = {19--31},
year = {1996},
url = {https://doi.org/10.1089/cmb.1996.3.19},
doi = {10.1089/CMB.1996.3.19},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/HendyP96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/CharlestonHP94,
author = {Michael A. Charleston and
Michael D. Hendy and
David Penny},
title = {The Effects of Sequence Length, Tree Topology, and Number of Taxa
on the Performance of Phylogenetic Methods},
journal = {J. Comput. Biol.},
volume = {1},
number = {2},
pages = {133--151},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.133},
doi = {10.1089/CMB.1994.1.133},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/CharlestonHP94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SteelSH94,
author = {Mike A. Steel and
L{\'{a}}szl{\'{o}} A. Sz{\'{e}}kely and
Michael D. Hendy},
title = {Reconstructing Trees When Sequence Sites Evolve at Variable Rates},
journal = {J. Comput. Biol.},
volume = {1},
number = {2},
pages = {153--163},
year = {1994},
url = {https://doi.org/10.1089/cmb.1994.1.153},
doi = {10.1089/CMB.1994.1.153},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/SteelSH94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ajc/Hendy92,
author = {Michael D. Hendy},
title = {The path sets of weighted partially labelled trees},
journal = {Australas. {J} Comb.},
volume = {5},
pages = {277--284},
year = {1992},
url = {http://ajc.maths.uq.edu.au/pdf/5/ocr-ajc-v5-p277.pdf},
timestamp = {Wed, 11 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ajc/Hendy92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dm/Hendy91,
author = {Michael D. Hendy},
title = {A combinatorial description of the closest tree algorithm for finding
evolutionary trees},
journal = {Discret. Math.},
volume = {96},
number = {1},
pages = {51--58},
year = {1991},
url = {https://doi.org/10.1016/0012-365X(91)90469-I},
doi = {10.1016/0012-365X(91)90469-I},
timestamp = {Fri, 12 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/dm/Hendy91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamdm/CarterHPSW90,
author = {M. Carter and
Michael D. Hendy and
David Penny and
L{\'{a}}szl{\'{o}} A. Sz{\'{e}}kely and
Nicholas C. Wormald},
title = {On the Distribution of Lengths of Evolutionary Trees},
journal = {{SIAM} J. Discret. Math.},
volume = {3},
number = {1},
pages = {38--47},
year = {1990},
url = {https://doi.org/10.1137/0403005},
doi = {10.1137/0403005},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamdm/CarterHPSW90.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PennyH87,
author = {David Penny and
Michael D. Hendy},
title = {TurboTree: a fast algorithm for minimal trees},
journal = {Comput. Appl. Biosci.},
volume = {3},
number = {3},
pages = {183--187},
year = {1987},
url = {https://doi.org/10.1093/bioinformatics/3.3.183},
doi = {10.1093/BIOINFORMATICS/3.3.183},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PennyH87.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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