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ORCIDBibTeX records: Timothy S. Coalson
@article{DBLP:journals/fini/JiDFTPKMPHWWZCGHSMAR23,
author = {Jie Lisa Ji and
Jure Demsar and
Clara Fonteneau and
Zailyn Tamayo and
Lining Pan and
Aleksij Kraljic and
Andraz Matkovic and
Nina Purg and
Markus Helmer and
Shaun Warrington and
Anderson M. Winkler and
Valerio Zerbi and
Timothy S. Coalson and
Matthew F. Glasser and
Michael P. Harms and
Stamatios N. Sotiropoulos and
John D. Murray and
Alan Anticevic and
Grega Repovs},
title = {QuNex - An integrative platform for reproducible neuroimaging analytics},
journal = {Frontiers Neuroinformatics},
volume = {17},
year = {2023},
url = {https://doi.org/10.3389/fninf.2023.1104508},
doi = {10.3389/FNINF.2023.1104508},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fini/JiDFTPKMPHWWZCGHSMAR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GlasserCHXBAAGY22,
author = {Matthew F. Glasser and
Timothy S. Coalson and
Michael P. Harms and
Junqian Xu and
Graham L. Baum and
Joonas A. A. Autio and
Edward J. Auerbach and
Douglas N. Greve and
Essa Yacoub and
David C. Van Essen and
Nicholas A. Bock and
Takuya Hayashi},
title = {Empirical transmit field bias correction of T1w/T2w myelin maps},
journal = {NeuroImage},
volume = {258},
pages = {119360},
year = {2022},
url = {https://doi.org/10.1016/j.neuroimage.2022.119360},
doi = {10.1016/J.NEUROIMAGE.2022.119360},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/GlasserCHXBAAGY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/midl/DahanFWYCGERR22,
author = {Simon Dahan and
Abdulah Fawaz and
Logan Z. J. Williams and
Chunhui Yang and
Timothy S. Coalson and
Matthew F. Glasser and
A. David Edwards and
Daniel Rueckert and
Emma C. Robinson},
editor = {Ender Konukoglu and
Bjoern H. Menze and
Archana Venkataraman and
Christian F. Baumgartner and
Qi Dou and
Shadi Albarqouni},
title = {Surface Vision Transformers: Attention-Based Modelling applied to
Cortical Analysis},
booktitle = {International Conference on Medical Imaging with Deep Learning, {MIDL}
2022, 6-8 July 2022, Zurich, Switzerland},
series = {Proceedings of Machine Learning Research},
volume = {172},
pages = {282--303},
publisher = {{PMLR}},
year = {2022},
url = {https://proceedings.mlr.press/v172/dahan22a.html},
timestamp = {Fri, 17 Feb 2023 16:29:10 +0100},
biburl = {https://dblp.org/rec/conf/midl/DahanFWYCGERR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-16414,
author = {Simon Dahan and
Abdulah Fawaz and
Logan Z. J. Williams and
Chunhui Yang and
Timothy S. Coalson and
Matthew F. Glasser and
A. David Edwards and
Daniel Rueckert and
Emma C. Robinson},
title = {Surface Vision Transformers: Attention-Based Modelling applied to
Cortical Analysis},
journal = {CoRR},
volume = {abs/2203.16414},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.16414},
doi = {10.48550/ARXIV.2203.16414},
eprinttype = {arXiv},
eprint = {2203.16414},
timestamp = {Mon, 04 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-16414.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2204-03408,
author = {Simon Dahan and
Hao Xu and
Logan Z. J. Williams and
Abdulah Fawaz and
Chunhui Yang and
Timothy S. Coalson and
Michelle C. Williams and
David E. Newby and
A. David Edwards and
Matthew F. Glasser and
Alistair A. Young and
Daniel Rueckert and
Emma C. Robinson},
title = {Surface Vision Transformers: Flexible Attention-Based Modelling of
Biomedical Surfaces},
journal = {CoRR},
volume = {abs/2204.03408},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2204.03408},
doi = {10.48550/ARXIV.2204.03408},
eprinttype = {arXiv},
eprint = {2204.03408},
timestamp = {Wed, 13 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2204-03408.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/HayashiHGAKICYS21,
author = {Takuya Hayashi and
Yujie Hou and
Matthew F. Glasser and
Joonas A. A. Autio and
Kenneth Knoblauch and
Miho Inoue{-}Murayama and
Timothy S. Coalson and
Essa Yacoub and
Stephen M. Smith and
Henry Kennedy and
David C. Van Essen},
title = {The nonhuman primate neuroimaging and neuroanatomy project},
journal = {NeuroImage},
volume = {229},
pages = {117726},
year = {2021},
url = {https://doi.org/10.1016/j.neuroimage.2021.117726},
doi = {10.1016/J.NEUROIMAGE.2021.117726},
timestamp = {Mon, 22 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/HayashiHGAKICYS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/AutioGODBOKUMNY20,
author = {Joonas A. A. Autio and
Matthew F. Glasser and
Takayuki Ose and
Chad J. Donahue and
Matteo Bastiani and
Masahiro Ohno and
Yoshihiko Kawabata and
Yuta Urushibata and
Katsutoshi Murata and
Kantaro Nishigori and
Masataka Yamaguchi and
Yuki Hori and
Atsushi Yoshida and
Yasuhiro Go and
Timothy S. Coalson and
Sa{\^{a}}d Jbabdi and
Stamatios N. Sotiropoulos and
Henry Kennedy and
Takuya Hayashi},
title = {Towards HCP-Style macaque connectomes: 24-Channel 3T multi-array coil,
{MRI} sequences and preprocessing},
journal = {NeuroImage},
volume = {215},
pages = {116800},
year = {2020},
url = {https://doi.org/10.1016/j.neuroimage.2020.116800},
doi = {10.1016/J.NEUROIMAGE.2020.116800},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/AutioGODBOKUMNY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/KirkCCC20,
author = {Thomas F. Kirk and
Timothy S. Coalson and
Martin S. Craig and
Michael A. Chappell},
title = {Toblerone: Surface-Based Partial Volume Estimation},
journal = {{IEEE} Trans. Medical Imaging},
volume = {39},
number = {5},
pages = {1501--1510},
year = {2020},
url = {https://doi.org/10.1109/TMI.2019.2951080},
doi = {10.1109/TMI.2019.2951080},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmi/KirkCCC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GlasserCBHHAES19,
author = {Matthew F. Glasser and
Timothy S. Coalson and
Janine D. Bijsterbosch and
Samuel J. Harrison and
Michael P. Harms and
Alan Anticevic and
David C. Van Essen and
Stephen M. Smith},
title = {Classification of temporal {ICA} components for separating global
noise from fMRI data: Reply to Power},
journal = {NeuroImage},
volume = {197},
pages = {435--438},
year = {2019},
url = {https://doi.org/10.1016/j.neuroimage.2019.04.046},
doi = {10.1016/J.NEUROIMAGE.2019.04.046},
timestamp = {Mon, 22 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/GlasserCBHHAES19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/DickieASCMCVGEV19,
author = {Erin W. Dickie and
Alan Anticevic and
Dawn E. Smith and
Timothy S. Coalson and
Mathuvanthi Manogaran and
Navona Calarco and
Joseph D. Viviano and
Matthew F. Glasser and
David C. Van Essen and
Aristotle N. Voineskos},
title = {Ciftify: {A} framework for surface-based analysis of legacy {MR} acquisitions},
journal = {NeuroImage},
volume = {197},
pages = {818--826},
year = {2019},
url = {https://doi.org/10.1016/j.neuroimage.2019.04.078},
doi = {10.1016/J.NEUROIMAGE.2019.04.078},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/DickieASCMCVGEV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/RobinsonGGCCMBW18,
author = {Emma C. Robinson and
Kara Garcia and
Matthew F. Glasser and
Zhengdao Chen and
Timothy S. Coalson and
Antonios Makropoulos and
Jelena Bozek and
Robert Wright and
Andreas Schuh and
Matthew A. Webster and
Jana Hutter and
Anthony Price and
Lucilio Cordero{-}Grande and
Emer J. Hughes and
Nora Tusor and
Philip V. Bayly and
David C. Van Essen and
Stephen M. Smith and
Daniel Rueckert},
title = {Multimodal surface matching with higher-order smoothness constraints},
journal = {NeuroImage},
volume = {167},
pages = {453--465},
year = {2018},
url = {https://doi.org/10.1016/j.neuroimage.2017.10.037},
doi = {10.1016/J.NEUROIMAGE.2017.10.037},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/RobinsonGGCCMBW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/BozekMSFWGCOHPC18,
author = {Jelena Bozek and
Antonios Makropoulos and
Andreas Schuh and
Sean P. Fitzgibbon and
Robert Wright and
Matthew F. Glasser and
Timothy S. Coalson and
Jonathan O'Muircheartaigh and
Jana Hutter and
Anthony N. Price and
Lucilio Cordero{-}Grande and
Rui Pedro A. G. Teixeira and
Emer J. Hughes and
Nora Tusor and
Kelly Pegoretti Baruteau and
Mary A. Rutherford and
A. David Edwards and
Joseph V. Hajnal and
Emma C. Robinson},
title = {Construction of a neonatal cortical surface atlas using Multimodal
Surface Matching in the Developing Human Connectome Project},
journal = {NeuroImage},
volume = {179},
pages = {11--29},
year = {2018},
url = {https://doi.org/10.1016/j.neuroimage.2018.06.018},
doi = {10.1016/J.NEUROIMAGE.2018.06.018},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/BozekMSFWGCOHPC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GlasserCBHHAES18,
author = {Matthew F. Glasser and
Timothy S. Coalson and
Janine D. Bijsterbosch and
Samuel J. Harrison and
Michael P. Harms and
Alan Anticevic and
David C. Van Essen and
Stephen M. Smith},
title = {Using temporal {ICA} to selectively remove global noise while preserving
global signal in functional {MRI} data},
journal = {NeuroImage},
volume = {181},
pages = {692--717},
year = {2018},
url = {https://doi.org/10.1016/j.neuroimage.2018.04.076},
doi = {10.1016/J.NEUROIMAGE.2018.04.076},
timestamp = {Mon, 22 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/GlasserCBHHAES18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/FukutomiGZACOTE18,
author = {Hikaru Fukutomi and
Matthew F. Glasser and
Hui Zhang and
Joonas A. A. Autio and
Timothy S. Coalson and
Tomohisa Okada and
Kaori Togashi and
David C. Van Essen and
Takuya Hayashi},
title = {Neurite imaging reveals microstructural variations in human cerebral
cortical gray matter},
journal = {NeuroImage},
volume = {182},
pages = {488--499},
year = {2018},
url = {https://doi.org/10.1016/j.neuroimage.2018.02.017},
doi = {10.1016/J.NEUROIMAGE.2018.02.017},
timestamp = {Mon, 25 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/FukutomiGZACOTE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/EssenSGEDDRCH17,
author = {David C. Van Essen and
John Smith and
Matthew F. Glasser and
Jennifer Stine Elam and
Chad J. Donahue and
Donna L. Dierker and
Erin Reid and
Timothy S. Coalson and
John W. Harwell},
title = {The Brain Analysis Library of Spatial maps and Atlases {(BALSA)} database},
journal = {NeuroImage},
volume = {144},
pages = {270--274},
year = {2017},
url = {https://doi.org/10.1016/j.neuroimage.2016.04.002},
doi = {10.1016/J.NEUROIMAGE.2016.04.002},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/EssenSGEDDRCH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/VuJGSCMAUY17,
author = {An T. Vu and
Keith Jamison and
Matthew F. Glasser and
Stephen M. Smith and
Timothy S. Coalson and
Steen Moeller and
Edward J. Auerbach and
K{\^{a}}mil Ugurbil and
Essa Yacoub},
title = {Tradeoffs in pushing the spatial resolution of fMRI for the 7T Human
Connectome Project},
journal = {NeuroImage},
volume = {154},
pages = {23--32},
year = {2017},
url = {https://doi.org/10.1016/j.neuroimage.2016.11.049},
doi = {10.1016/J.NEUROIMAGE.2016.11.049},
timestamp = {Mon, 22 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/VuJGSCMAUY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nature/GlasserCRHHYUAB16,
author = {Matthew F. Glasser and
Timothy S. Coalson and
Emma C. Robinson and
Carl D. Hacker and
John W. Harwell and
Essa Yacoub and
K{\^{a}}mil Ugurbil and
Jesper L. R. Andersson and
Christian F. Beckmann and
Mark Jenkinson and
Stephen M. Smith and
David C. Van Essen},
title = {A multi-modal parcellation of human cerebral cortex},
journal = {Nat.},
volume = {536},
number = {7615},
pages = {171--178},
year = {2016},
url = {https://doi.org/10.1038/nature18933},
doi = {10.1038/NATURE18933},
timestamp = {Mon, 22 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nature/GlasserCRHHYUAB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/AbdollahiKGRCDJEO14,
author = {Rouhollah O. Abdollahi and
Hauke Kolster and
Matthew F. Glasser and
Emma C. Robinson and
Timothy S. Coalson and
Donna L. Dierker and
Mark Jenkinson and
David C. Van Essen and
Guy A. Orban},
title = {Correspondences between retinotopic areas and myelin maps in human
visual cortex},
journal = {NeuroImage},
volume = {99},
pages = {509--524},
year = {2014},
url = {https://doi.org/10.1016/j.neuroimage.2014.06.042},
doi = {10.1016/J.NEUROIMAGE.2014.06.042},
timestamp = {Tue, 04 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/AbdollahiKGRCDJEO14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/GlasserSWCFAXJWPEJ13,
author = {Matthew F. Glasser and
Stamatios N. Sotiropoulos and
J. Anthony Wilson and
Timothy S. Coalson and
Bruce Fischl and
Jesper L. R. Andersson and
Junqian Xu and
Sa{\^{a}}d Jbabdi and
Matthew A. Webster and
Jonathan R. Polimeni and
David C. Van Essen and
Mark Jenkinson},
title = {The minimal preprocessing pipelines for the Human Connectome Project},
journal = {NeuroImage},
volume = {80},
pages = {105--124},
year = {2013},
url = {https://doi.org/10.1016/j.neuroimage.2013.04.127},
doi = {10.1016/J.NEUROIMAGE.2013.04.127},
timestamp = {Fri, 30 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/GlasserSWCFAXJWPEJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/MarcusHSJWGBABRHHHOMHHRHCSECE13,
author = {Daniel S. Marcus and
Michael P. Harms and
Abraham Z. Snyder and
Mark Jenkinson and
J. Anthony Wilson and
Matthew F. Glasser and
Deanna M. Barch and
Kevin A. Archie and
Gregory C. Burgess and
Mohana Ramaratnam and
Michael R. Hodge and
William Horton and
Rick Herrick and
Timothy R. Olsen and
Michael McKay and
Matthew House and
Michael Hileman and
Erin Reid and
John W. Harwell and
Timothy S. Coalson and
Jon Schindler and
Jennifer Stine Elam and
Sandra W. Curtiss and
David C. Van Essen},
title = {Human Connectome Project informatics: Quality control, database services,
and data visualization},
journal = {NeuroImage},
volume = {80},
pages = {202--219},
year = {2013},
url = {https://doi.org/10.1016/j.neuroimage.2013.05.077},
doi = {10.1016/J.NEUROIMAGE.2013.05.077},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/neuroimage/MarcusHSJWGBABRHHHOMHHRHCSECE13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/AnticevicRDHCBE12,
author = {Alan Anticevic and
Grega Repovs and
Donna L. Dierker and
John W. Harwell and
Timothy S. Coalson and
Deanna M. Barch and
David C. Van Essen},
title = {Automated landmark identification for human cortical surface-based
registration},
journal = {NeuroImage},
volume = {59},
number = {3},
pages = {2539--2547},
year = {2012},
url = {https://doi.org/10.1016/j.neuroimage.2011.08.093},
doi = {10.1016/J.NEUROIMAGE.2011.08.093},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/neuroimage/AnticevicRDHCBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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