BibTeX records: Leo S. D. Caves

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@article{DBLP:journals/alife/Caves24,
  author       = {Leo S. D. Caves},
  title        = {Review of Model Systems in Biology: History, Philosophy, and Practical
                  Concerns by Georg Striedter},
  journal      = {Artif. Life},
  volume       = {30},
  number       = {1},
  pages        = {138--142},
  year         = {2024},
  url          = {https://doi.org/10.1162/artl\_r\_00421},
  doi          = {10.1162/ARTL\_R\_00421},
  timestamp    = {Mon, 22 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/alife/Caves24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tnn/TurnerCSTL17,
  author       = {Alexander P. Turner and
                  Leo S. D. Caves and
                  Susan Stepney and
                  Andy M. Tyrrell and
                  Michael A. Lones},
  title        = {Artificial Epigenetic Networks: Automatic Decomposition of Dynamical
                  Control Tasks Using Topological Self-Modification},
  journal      = {{IEEE} Trans. Neural Networks Learn. Syst.},
  volume       = {28},
  number       = {1},
  pages        = {218--230},
  year         = {2017},
  url          = {https://doi.org/10.1109/TNNLS.2015.2497142},
  doi          = {10.1109/TNNLS.2015.2497142},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tnn/TurnerCSTL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ecal/2015,
  editor       = {Paul S. Andrews and
                  Leo S. D. Caves and
                  Ren{\'{e}} Doursat and
                  Simon J. Hickinbotham and
                  Fiona A. C. Polack and
                  Susan Stepney and
                  Tim Taylor and
                  Jon Timmis},
  title        = {Proceedings of the Thirteenth European Conference Artificial Life,
                  {ECAL} 2015, York, UK, July 20-24, 2015},
  publisher    = {{MIT} Press},
  year         = {2015},
  url          = {https://direct.mit.edu/isal/ecal2015/volume/27},
  isbn         = {978-0-262-33027-5},
  timestamp    = {Thu, 07 Jul 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ecal/2015.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tec/LonesFTCSST14,
  author       = {Michael A. Lones and
                  Luis A. Fuente and
                  Alexander P. Turner and
                  Leo S. D. Caves and
                  Susan Stepney and
                  Stephen L. Smith and
                  Andy M. Tyrrell},
  title        = {Artificial Biochemical Networks: Evolving Dynamical Systems to Control
                  Dynamical Systems},
  journal      = {{IEEE} Trans. Evol. Comput.},
  volume       = {18},
  number       = {2},
  pages        = {145--166},
  year         = {2014},
  url          = {https://doi.org/10.1109/TEVC.2013.2243732},
  doi          = {10.1109/TEVC.2013.2243732},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tec/LonesFTCSST14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/TurnerLFSCT13,
  author       = {Alexander P. Turner and
                  Michael A. Lones and
                  Luis A. Fuente and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  title        = {The incorporation of epigenetics in artificial gene regulatory networks},
  journal      = {Biosyst.},
  volume       = {112},
  number       = {2},
  pages        = {56--62},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.biosystems.2013.03.013},
  doi          = {10.1016/J.BIOSYSTEMS.2013.03.013},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biosystems/TurnerLFSCT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biosystems/FuenteLTSCT13,
  author       = {Luis A. Fuente and
                  Michael A. Lones and
                  Alexander P. Turner and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  title        = {Computational models of signalling networks for non-linear control},
  journal      = {Biosyst.},
  volume       = {112},
  number       = {2},
  pages        = {122--130},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.biosystems.2013.03.006},
  doi          = {10.1016/J.BIOSYSTEMS.2013.03.006},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biosystems/FuenteLTSCT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/LonesTSC13,
  author       = {Michael A. Lones and
                  Andy M. Tyrrell and
                  Susan Stepney and
                  Leo S. D. Caves},
  title        = {Special issue on the frontiers of natural computing},
  journal      = {Nat. Comput.},
  volume       = {12},
  number       = {4},
  pages        = {441--442},
  year         = {2013},
  url          = {https://doi.org/10.1007/s11047-013-9402-9},
  doi          = {10.1007/S11047-013-9402-9},
  timestamp    = {Thu, 02 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/LonesTSC13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nc/LonesTFSCT13,
  author       = {Michael A. Lones and
                  Alexander P. Turner and
                  Luis A. Fuente and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  title        = {Biochemical connectionism},
  journal      = {Nat. Comput.},
  volume       = {12},
  number       = {4},
  pages        = {453--472},
  year         = {2013},
  url          = {https://doi.org/10.1007/s11047-013-9400-y},
  doi          = {10.1007/S11047-013-9400-Y},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/LonesTFSCT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cec/FuenteLTCST13,
  author       = {Luis A. Fuente and
                  Michael A. Lones and
                  Alexander P. Turner and
                  Leo S. D. Caves and
                  Susan Stepney and
                  Andy M. Tyrrell},
  title        = {Adaptive robotic gait control using coupled artificial signalling
                  networks, hopf oscillators and inverse kinematics},
  booktitle    = {Proceedings of the {IEEE} Congress on Evolutionary Computation, {CEC}
                  2013, Cancun, Mexico, June 20-23, 2013},
  pages        = {1435--1442},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/CEC.2013.6557732},
  doi          = {10.1109/CEC.2013.6557732},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cec/FuenteLTCST13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ices/TurnerLFSCT13,
  author       = {Alexander P. Turner and
                  Michael A. Lones and
                  Luis A. Fuente and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  title        = {The artificial epigenetic network},
  booktitle    = {2013 {IEEE} International Conference on Evolvable Systems, {ICES}
                  2013, Singapore, April 16-19, 2013},
  pages        = {66--72},
  publisher    = {{IEEE}},
  year         = {2013},
  url          = {https://doi.org/10.1109/ICES.2013.6613284},
  doi          = {10.1109/ICES.2013.6613284},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ices/TurnerLFSCT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/ElSawyTVC12,
  author       = {Karim M. ElSawy and
                  Reidun Twarock and
                  Chandra S. Verma and
                  Leo S. D. Caves},
  title        = {Peptide Inhibitors of Viral Assembly: {A} Novel Route to Broad-Spectrum
                  Antivirals},
  journal      = {J. Chem. Inf. Model.},
  volume       = {52},
  number       = {3},
  pages        = {770--776},
  year         = {2012},
  url          = {https://doi.org/10.1021/ci200467s},
  doi          = {10.1021/CI200467S},
  timestamp    = {Mon, 04 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/ElSawyTVC12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipcat/TurnerLFSCT12,
  author       = {Alexander P. Turner and
                  Michael A. Lones and
                  Luis A. Fuente and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  editor       = {Michael A. Lones and
                  Stephen L. Smith and
                  Sarah A. Teichmann and
                  Felix Naef and
                  James Alfred Walker and
                  Martin Trefzer},
  title        = {Using Artificial Epigenetic Regulatory Networks to Control Complex
                  Tasks within Chaotic Systems},
  booktitle    = {Information Processign in Cells and Tissues - 9th International Conference,
                  {IPCAT} 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7223},
  pages        = {1--11},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-28792-3\_1},
  doi          = {10.1007/978-3-642-28792-3\_1},
  timestamp    = {Thu, 23 Jun 2022 19:59:03 +0200},
  biburl       = {https://dblp.org/rec/conf/ipcat/TurnerLFSCT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipcat/FuenteLTSCT12,
  author       = {Luis A. Fuente and
                  Michael A. Lones and
                  Alexander P. Turner and
                  Susan Stepney and
                  Leo S. D. Caves and
                  Andy M. Tyrrell},
  editor       = {Michael A. Lones and
                  Stephen L. Smith and
                  Sarah A. Teichmann and
                  Felix Naef and
                  James Alfred Walker and
                  Martin Trefzer},
  title        = {Evolved Artificial Signalling Networks for the Control of a Conservative
                  Complex Dynamical System},
  booktitle    = {Information Processign in Cells and Tissues - 9th International Conference,
                  {IPCAT} 2012, Cambridge, UK, March 31 - April 2, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7223},
  pages        = {38--49},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-28792-3\_7},
  doi          = {10.1007/978-3-642-28792-3\_7},
  timestamp    = {Fri, 02 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ipcat/FuenteLTSCT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecal/LonesTSC11,
  author       = {Michael A. Lones and
                  Andy M. Tyrrell and
                  Susan Stepney and
                  Leo S. D. Caves},
  editor       = {Tom Lenaerts and
                  Mario Giacobini and
                  Hugues Bersini and
                  Paul Bourgine and
                  Marco Dorigo and
                  Ren{\'{e}} Doursat},
  title        = {Controlling legged robots with coupled artificial biochemical networks},
  booktitle    = {Advances in Artificial Life: 20th Anniversary Edition - Back to the
                  Origins of Alife, {ECAL} 2011, Paris, France, August 8-12, 2011},
  pages        = {465--472},
  publisher    = {{MIT} Press},
  year         = {2011},
  url          = {http://mitpress.mit.edu/sites/default/files/titles/alife/0262297140chap72.pdf},
  timestamp    = {Thu, 07 Jul 2022 15:49:20 +0200},
  biburl       = {https://dblp.org/rec/conf/ecal/LonesTSC11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alife/FaulconbridgeSMC10,
  author       = {Adam Faulconbridge and
                  Susan Stepney and
                  Julian F. Miller and
                  Leo S. D. Caves},
  editor       = {Harold Fellermann and
                  Mark D{\"{o}}rr and
                  Martin M. Hanczyc and
                  Lone Ladegaard Laursen and
                  Sarah Elizabeth Maurer and
                  Daniel Merkle and
                  Pierre{-}Alain Monnard and
                  Kasper St{\o}y and
                  Steen Rasmussen},
  title        = {RBN-World - The Hunt for a Rich AChem},
  booktitle    = {Proceedings of the Twelfth International Conference on the Synthesis
                  and Simulation of Living Systems, {ALIFE} 2010, Odense, Denmark, August
                  19-23, 2010},
  pages        = {261--268},
  publisher    = {{MIT} Press},
  year         = {2010},
  url          = {http://mitpress2.mit.edu/books/chapters/0262290758chap51.pdf},
  timestamp    = {Sun, 03 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/alife/FaulconbridgeSMC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eurogp/LonesTSC10,
  author       = {Michael A. Lones and
                  Andy M. Tyrrell and
                  Susan Stepney and
                  Leo S. D. Caves},
  editor       = {Anna Isabel Esparcia{-}Alc{\'{a}}zar and
                  Anik{\'{o}} Ek{\'{a}}rt and
                  Sara Silva and
                  Stephen Dignum and
                  A. Sima Etaner{-}Uyar},
  title        = {Controlling Complex Dynamics with Artificial Biochemical Networks},
  booktitle    = {Genetic Programming, 13th European Conference, EuroGP 2010, Istanbul,
                  Turkey, April 7-9, 2010. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {6021},
  pages        = {159--170},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-3-642-12148-7\_14},
  doi          = {10.1007/978-3-642-12148-7\_14},
  timestamp    = {Tue, 14 May 2019 10:00:50 +0200},
  biburl       = {https://dblp.org/rec/conf/eurogp/LonesTSC10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/BrooksBMNPRWABBCCCDFFGHIKLMOPPPPSTVWWYYK09,
  author       = {Bernard R. Brooks and
                  Charles L. Brooks III and
                  Alexander D. MacKerell Jr. and
                  Lennart Nilsson and
                  Robert J. Petrella and
                  Beno{\^{\i}}t Roux and
                  Y. Won and
                  G. Archontis and
                  Christian Bartels and
                  Stefan Boresch and
                  Amedeo Caflisch and
                  Leo S. D. Caves and
                  Qiang Cui and
                  Aaron R. Dinner and
                  Michael Feig and
                  S. Fischer and
                  Jiali Gao and
                  Milan Hodoscek and
                  Wonpil Im and
                  Krzysztof Kuczera and
                  Themis Lazaridis and
                  J. Ma and
                  Victor Ovchinnikov and
                  Emanuele Paci and
                  Richard W. Pastor and
                  C. B. Post and
                  J. Z. Pu and
                  Michael Schaefer and
                  Bruce Tidor and
                  Richard M. Venable and
                  H. Lee Woodcock III and
                  X. Wu and
                  W. Yang and
                  Darrin M. York and
                  Martin Karplus},
  title        = {{CHARMM:} The biomolecular simulation program},
  journal      = {J. Comput. Chem.},
  volume       = {30},
  number       = {10},
  pages        = {1545--1614},
  year         = {2009},
  url          = {https://doi.org/10.1002/jcc.21287},
  doi          = {10.1002/JCC.21287},
  timestamp    = {Thu, 08 Sep 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/BrooksBMNPRWABBCCCDFFGHIKLMOPPPPSTVWWYYK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecal/DanksSC09,
  author       = {Gemma B. Danks and
                  Susan Stepney and
                  Leo S. D. Caves},
  editor       = {George Kampis and
                  Istv{\'{a}}n Karsai and
                  E{\"{o}}rs Szathm{\'{a}}ry},
  title        = {Cotranslational Protein Folding with L-systems},
  booktitle    = {Advances in Artificial Life. Darwin Meets von Neumann - 10th European
                  Conference, {ECAL} 2009, Budapest, Hungary, September 13-16, 2009,
                  Revised Selected Papers, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5777},
  pages        = {289--296},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-21283-3\_36},
  doi          = {10.1007/978-3-642-21283-3\_36},
  timestamp    = {Tue, 14 May 2019 10:00:42 +0200},
  biburl       = {https://dblp.org/rec/conf/ecal/DanksSC09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecal/FaulconbridgeSMC09,
  author       = {Adam Faulconbridge and
                  Susan Stepney and
                  Julian F. Miller and
                  Leo S. D. Caves},
  editor       = {George Kampis and
                  Istv{\'{a}}n Karsai and
                  E{\"{o}}rs Szathm{\'{a}}ry},
  title        = {RBN-World - {A} Sub-symbolic Artificial Chemistry},
  booktitle    = {Advances in Artificial Life. Darwin Meets von Neumann - 10th European
                  Conference, {ECAL} 2009, Budapest, Hungary, September 13-16, 2009,
                  Revised Selected Papers, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {5777},
  pages        = {377--384},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-21283-3\_47},
  doi          = {10.1007/978-3-642-21283-3\_47},
  timestamp    = {Wed, 14 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecal/FaulconbridgeSMC09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/alife/DanksSC08,
  author       = {Gemma B. Danks and
                  Susan Stepney and
                  Leo S. D. Caves},
  editor       = {Seth Bullock and
                  Jason Noble and
                  Richard A. Watson and
                  Mark A. Bedau},
  title        = {Protein folding with stochastic L-systems},
  booktitle    = {Proceedings of the Eleventh International Conference on the Synthesis
                  and Simulation of Living Systems, {ALIFE} 2008, Winchester, United
                  Kingdom, August 5-8, 2008},
  pages        = {150--157},
  publisher    = {{MIT} Press},
  year         = {2008},
  url          = {http://mitpress2.mit.edu/books/chapters/0262287196chap20.pdf},
  timestamp    = {Sun, 03 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/alife/DanksSC08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecal/DanksSC07,
  author       = {Gemma B. Danks and
                  Susan Stepney and
                  Leo S. D. Caves},
  editor       = {Fernando Almeida e Costa and
                  Luis Mateus Rocha and
                  Ernesto Costa and
                  Inman Harvey and
                  Ant{\'{o}}nio Coutinho},
  title        = {Folding Protein-Like Structures with Open L-Systems},
  booktitle    = {Advances in Artificial Life, 9th European Conference, {ECAL} 2007,
                  Lisbon, Portugal, September 10-14, 2007, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {4648},
  pages        = {1100--1109},
  publisher    = {Springer},
  year         = {2007},
  url          = {https://doi.org/10.1007/978-3-540-74913-4\_110},
  doi          = {10.1007/978-3-540-74913-4\_110},
  timestamp    = {Sun, 02 Oct 2022 15:59:28 +0200},
  biburl       = {https://dblp.org/rec/conf/ecal/DanksSC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrantREMC06,
  author       = {Barry J. Grant and
                  Ana P. C. Rodrigues and
                  Karim M. ElSawy and
                  James Andrew McCammon and
                  Leo S. D. Caves},
  title        = {Bio3d: an {R} package for the comparative analysis of protein structures},
  journal      = {Bioinform.},
  volume       = {22},
  number       = {21},
  pages        = {2695--2696},
  year         = {2006},
  url          = {https://doi.org/10.1093/bioinformatics/btl461},
  doi          = {10.1093/BIOINFORMATICS/BTL461},
  timestamp    = {Tue, 21 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/GrantREMC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcc/ChunPCWKASBBCNHF00,
  author       = {Hon M. Chun and
                  Carlos E. Padilla and
                  Donovan N. Chin and
                  Masakatsu Watanabe and
                  Valeri I. Karlov and
                  Howard E. Alper and
                  Keto Soosaar and
                  Kim B. Blair and
                  Oren M. Becker and
                  Leo S. D. Caves and
                  Robert Nagle and
                  David N. Haney and
                  Barry L. Farmer},
  title        = {{MBO(N)D:} {A} multibody method for long-time molecular dynamics simulations},
  journal      = {J. Comput. Chem.},
  volume       = {21},
  number       = {3},
  pages        = {159--184},
  year         = {2000},
  url          = {https://doi.org/10.1002/(SICI)1096-987X(200002)21:3\&\#60;159::AID-JCC1\&\#62;3.0.CO;2-J},
  doi          = {10.1002/(SICI)1096-987X(200002)21:3\&\#60;159::AID-JCC1\&\#62;3.0.CO;2-J},
  timestamp    = {Wed, 01 Apr 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcc/ChunPCWKASBBCNHF00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}