BibTeX records: Spencer Bliven

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@article{DBLP:journals/fbinf/DelucchiNBA21,
  author       = {Matteo Delucchi and
                  Paulina N{\"{a}}f and
                  Spencer Bliven and
                  Maria Anisimova},
  title        = {{TRAL} 2.0: Tandem Repeat Detection With Circular Profile Hidden Markov
                  Models and Evolutionary Aligner},
  journal      = {Frontiers Bioinform.},
  volume       = {1},
  year         = {2021},
  url          = {https://doi.org/10.3389/fbinf.2021.691865},
  doi          = {10.3389/FBINF.2021.691865},
  timestamp    = {Thu, 05 Jan 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/fbinf/DelucchiNBA21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/LafitaBPGRBPMVH19,
  author       = {Aleix Lafita and
                  Spencer Bliven and
                  Andreas Prlic and
                  Dmytro Guzenko and
                  Peter W. Rose and
                  Anthony R. Bradley and
                  Paolo Pavan and
                  Douglas Myers{-}Turnbull and
                  Yana Valasatava and
                  Michael L. Heuer and
                  Matt Larson and
                  Stephen K. Burley and
                  Jose M. Duarte},
  title        = {BioJava 5: {A} community driven open-source bioinformatics library},
  journal      = {PLoS Comput. Biol.},
  volume       = {15},
  number       = {2},
  year         = {2019},
  url          = {https://doi.org/10.1371/journal.pcbi.1006791},
  doi          = {10.1371/JOURNAL.PCBI.1006791},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/LafitaBPGRBPMVH19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/BlivenLRCPB19,
  author       = {Spencer E. Bliven and
                  Aleix Lafita and
                  Peter W. Rose and
                  Guido Capitani and
                  Andreas Prlic and
                  Philip E. Bourne},
  title        = {Analyzing the symmetrical arrangement of structural repeats in proteins
                  with CE-Symm},
  journal      = {PLoS Comput. Biol.},
  volume       = {15},
  number       = {4},
  year         = {2019},
  url          = {https://doi.org/10.1371/journal.pcbi.1006842},
  doi          = {10.1371/JOURNAL.PCBI.1006842},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BlivenLRCPB19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/BlivenLPCD18,
  author       = {Spencer Bliven and
                  Aleix Lafita and
                  Althea Parker and
                  Guido Capitani and
                  Jose M. Duarte},
  title        = {Automated evaluation of quaternary structures from protein crystals},
  journal      = {PLoS Comput. Biol.},
  volume       = {14},
  number       = {4},
  year         = {2018},
  url          = {https://doi.org/10.1371/journal.pcbi.1006104},
  doi          = {10.1371/JOURNAL.PCBI.1006104},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BlivenLPCD18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/CapitaniDBBS16,
  author       = {Guido Capitani and
                  Jose M. Duarte and
                  Kumaran Baskaran and
                  Spencer Bliven and
                  Joseph C. Somody},
  title        = {Understanding the fabric of protein crystals: computational classification
                  of biological interfaces and crystal contacts},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {4},
  pages        = {481--489},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btv622},
  doi          = {10.1093/BIOINFORMATICS/BTV622},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/CapitaniDBBS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/BrunkMMZOBCCBP16,
  author       = {Elizabeth Brunk and
                  Nathan Mih and
                  Jonathan Monk and
                  Zhen Zhang and
                  Edward J. O'Brien and
                  Spencer E. Bliven and
                  Ke Chen and
                  Roger L. Chang and
                  Philip E. Bourne and
                  Bernhard O. Palsson},
  title        = {Systems biology of the structural proteome},
  journal      = {{BMC} Syst. Biol.},
  volume       = {10},
  pages        = {26},
  year         = {2016},
  url          = {https://doi.org/10.1186/s12918-016-0271-6},
  doi          = {10.1186/S12918-016-0271-6},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/BrunkMMZOBCCBP16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@phdthesis{DBLP:phd/us/Bliven15,
  author       = {Spencer Bliven},
  title        = {Structure-Preserving Rearrangements: Algorithms for Structural Comparison
                  and Protein Analysis},
  school       = {University of California, San Diego, {USA}},
  year         = {2015},
  url          = {https://www.escholarship.org/uc/item/0t54p4gj},
  timestamp    = {Fri, 10 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/phd/us/Bliven15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/BlivenBP15,
  author       = {Spencer E. Bliven and
                  Philip E. Bourne and
                  Andreas Prlic},
  title        = {Detection of circular permutations within protein structures using
                  {CE-CP}},
  journal      = {Bioinform.},
  volume       = {31},
  number       = {8},
  pages        = {1316--1318},
  year         = {2015},
  url          = {https://doi.org/10.1093/bioinformatics/btu823},
  doi          = {10.1093/BIOINFORMATICS/BTU823},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BlivenBP15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/PrlicYBRJTCGKFHRHBBW12,
  author       = {Andreas Prlic and
                  Andrew D. Yates and
                  Spencer Bliven and
                  Peter W. Rose and
                  Julius O. B. Jacobsen and
                  Peter V. Troshin and
                  Mark Chapman and
                  Jianjiong Gao and
                  Chuan Hock Koh and
                  Sylvain Foisy and
                  Richard C. G. Holland and
                  Gediminas Rimsa and
                  Michael L. Heuer and
                  Hannes Brandst{\"{a}}tter{-}M{\"{u}}ller and
                  Philip E. Bourne and
                  Scooter Willis},
  title        = {BioJava: an open-source framework for bioinformatics in 2012},
  journal      = {Bioinform.},
  volume       = {28},
  number       = {20},
  pages        = {2693--2695},
  year         = {2012},
  url          = {https://doi.org/10.1093/bioinformatics/bts494},
  doi          = {10.1093/BIOINFORMATICS/BTS494},
  timestamp    = {Sun, 25 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PrlicYBRJTCGKFHRHBBW12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/PrlicBRBBGB10,
  author       = {Andreas Prlic and
                  Spencer Bliven and
                  Peter W. Rose and
                  Wolfgang Bluhm and
                  Chris Bizon and
                  Adam Godzik and
                  Philip E. Bourne},
  title        = {Pre-calculated protein structure alignments at the {RCSB} {PDB} website},
  journal      = {Bioinform.},
  volume       = {26},
  number       = {23},
  pages        = {2983--2985},
  year         = {2010},
  url          = {https://doi.org/10.1093/bioinformatics/btq572},
  doi          = {10.1093/BIOINFORMATICS/BTQ572},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PrlicBRBBGB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}