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Neuroinformatics, Volume 6
Volume 6, Number 1, March 2008
- Giorgio A. Ascoli:
Neuroinformatics Grand Challenges. 1-3 - Tianming Liu, Gang Li
, Jingxin Nie, Ashley Tarokh, Xiaobo Zhou, Lei Guo, Jarema Malicki
, Weiming Xia, Stephen T. C. Wong:
An Automated Method for Cell Detection in Zebrafish. 5-21 - Fabrizio de Vico Fallani, Laura Astolfi
, Febo Cincotti
, Donatella Mattia
, Maria Grazia Marciani
, Andrea Tocci, Serenella Salinari, Herbert Witte, Wolfram Hesse, Shangkai Gao, Alfredo Colosimo
, Fabio Babiloni
:
Cortical Network Dynamics during Foot Movements. 23-34 - Jean-Philippe Thivierge:
Higher Derivatives of ERP Responses to Cross-Modality Processing. 35-46 - Jeffrey L. Teeters, Kenneth D. Harris
, K. Jarrod Millman
, Bruno A. Olshausen, Friedrich T. Sommer:
Data Sharing for Computational Neuroscience. 47-55 - Barry G. Condron
:
A Freeware Java Tool for Spatial Point Analysis of Neuronal Structures. 57-61 - Ruggero Scorcioni, Susan N. Wright, J. Patrick Card, Giorgio A. Ascoli, Germán Barrionuevo:
Point Analysis in Java Applied to Histological Images of the Perforant Pathway: A User's Account. 63-67
Volume 6, Number 2, June 2008
- David N. Kennedy:
New Happenings at the NIH. 69-70 - Radhakrishnan Nagarajan, Barbara Clancy
:
Phylogenetic Proximity Revealed by Neurodevelopmental Event Timings. 71-79 - Lucia Rita Quitadamo
, Maria Grazia Marciani
, Gian Carlo Cardarilli
, Luigi Bianchi
:
Describing Different Brain Computer Interface Systems Through a Unique Model: A UML Implementation. 81-96 - Fuhai Li, Xiaobo Zhou, Jinmin Zhu, Weiming Xia, Jinwen Ma, Stephen T. C. Wong:
Workflow and Methods of High-Content Time-Lapse Analysis for Quantifying Intracellular Calcium Signals. 97-108 - Epifanio Bagarinao
, Kayako Matsuo, Toshiharu Nakai, Yoshio Tanaka:
BAX: A Toolbox for the Dynamic Analysis of Functional MRI Datasets. 109-115 - John Darrell Van Horn, Catherine A. Ball:
Domain-Specific Data Sharing in Neuroscience: What Do We Have to Learn from Each Other? 117-121 - Jing Zhang, Lichen Liang, Jon R. Anderson, Lael C. Gatewood, David A. Rottenberg, Stephen C. Strother
:
A Java-based fMRI Processing Pipeline Evaluation System for Assessment of Univariate General Linear Model and Multivariate Canonical Variate Analysis-based Pipelines. 123-134 - Scott C. Neu, Arthur W. Toga:
Automatic Localization of Anatomical Point Landmarks for Brain Image Processing Algorithms. 135-148
Volume 6, Number 3, September 2008
- Daniel Gardner, Huda Akil, Giorgio A. Ascoli, Douglas M. Bowden, William J. Bug, Duncan E. Donohue
, David H. Goldberg, Bernice Grafstein, Jeffrey S. Grethe
, Amarnath Gupta, Maryam Halavi, David N. Kennedy, Luis N. Marenco, Maryann E. Martone
, Perry L. Miller, Hans-Michael Müller, Adrian Robert, Gordon M. Shepherd, Paul W. Sternberg
, David C. Van Essen, Robert W. Williams
:
The Neuroscience Information Framework: A Data and Knowledge Environment for Neuroscience. 149-160 - Daniel Gardner, David H. Goldberg, Bernice Grafstein, Adrian Robert, Esther P. Gardner:
Terminology for Neuroscience Data Discovery: Multi-tree Syntax and Investigator-Derived Semantics. 161-174 - William J. Bug, Giorgio A. Ascoli, Jeffrey S. Grethe
, Amarnath Gupta, Christine Fennema-Notestine
, Angela R. Laird
, Stephen D. Larson, Daniel L. Rubin, Gordon M. Shepherd, Jessica A. Turner
, Maryann E. Martone
:
The NIFSTD and BIRNLex Vocabularies: Building Comprehensive Ontologies for Neuroscience. 175-194 - Hans-Michael Müller, Arun Rangarajan, Tracy K. Teal, Paul W. Sternberg
:
Textpresso for Neuroscience: Searching the Full Text of Thousands of Neuroscience Research Papers. 195-204 - Amarnath Gupta, William J. Bug, Luis N. Marenco, Xufei Qian, Christopher Condit, Arun Rangarajan, Hans-Michael Müller, Perry L. Miller, Brian Sanders
, Jeffrey S. Grethe
, Vadim Astakhov, Gordon M. Shepherd, Paul W. Sternberg
, Maryann E. Martone
:
Federated Access to Heterogeneous Information Resources in the Neuroscience Information Framework (NIF). 205-217 - Luis N. Marenco, Giorgio A. Ascoli, Maryann E. Martone
, Gordon M. Shepherd, Perry L. Miller:
The NIF LinkOut Broker: A Web Resource to Facilitate Federated Data Integration using NCBI Identifiers. 219-227 - Luis N. Marenco, Yuli Li, Maryann E. Martone
, Paul W. Sternberg
, Gordon M. Shepherd, Perry L. Miller:
Issues in the Design of a Pilot Concept-Based Query Interface for the Neuroinformatics Information Framework. 229-239 - Maryam Halavi, Sridevi Polavaram, Duncan E. Donohue
, Gail Hamilton, Jeffrey Hoyt, Kenneth P. Smith, Giorgio A. Ascoli:
NeuroMorpho.Org Implementation of Digital Neuroscience: Dense Coverage and Integration with the NIF. 241-252
Volume 6, Number 4, December 2008
- Erik De Schutter:
Reviewing Multi-Disciplinary Papers: a Challenge in Neuroscience? 253-255 - Ben Torben-Nielsen
, Stijn Vanderlooy, Eric O. Postma:
Non-parametric Algorithmic Generation of Neuronal Morphologies. 257-277 - Miroslaw Swiercz
, Jan Kochanowicz, John Weigele, Robert Hurst, David S. Liebeskind, Zenon Mariak
, Elias R. Melhem, Jaroslaw Krejza:
Learning Vector Quantization Neural Networks Improve Accuracy of Transcranial Color-coded Duplex Sonography in Detection of Middle Cerebral Artery Spasm - Preliminary Report. 279-290 - Massimiliano Versace, Heather Ames, Jasmin Léveillé, Bret Fortenberry, Anatoli Gorchetchnikov:
KInNeSS: A Modular Framework for Computational Neuroscience. 291-309
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