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Nucleic Acids Research, Volume 24
Volume 24, Number 1, January 1996
- Dennis A. Benson, Mark S. Boguski, David J. Lipman, James Ostell:
GenBank. 1-5 - Patricia Rodriguez-Tomé, Peter Stoehr
, Graham Cameron, Tomas P. Flores:
The European Bioinformatics Institute (EBI) databases. 6-12 - Gifford Keen, Jillian Burton, David Crowley, Emily Dickinson, Ada Espinosa-Lujan, Ed Franks, Carol Harger, Mo Manning, Shelley March, Mia McLeod, John O'Neill, Alicia Power, Maria Pumilia, Rhonda Reinert, David Rider, John Rohrlich, Jolene Schwertfeger, Linda Smyth, Nina Thayer, Charles Troup, Chris A. Fields
:
The Genome Sequence DataBase (GSDB): meeting the challenge of genomic sequencing. 13-16 - David G. George, Winona C. Barker, Hans-Werner Mewes
, Friedhelm Pfeiffer
, Akira Tsugita:
The PIR-International Protein Sequence Database. 17-20 - Amos Bairoch
, Rolf Apweiler
:
The SWISS-PROT protein sequence data bank and its new supplement TREMBL. 21-25 - Evgeni Selkov, Svetlana Basmanova
, Terry Gaasterland, Igor Goryanin
, Yuri Grechkin, Natalia Maltsev, Valeri Nenashev, Ross A. Overbeek, Elena Panyushkina, Lyudmila Pronevitch, Evgeni Selkov Jr., Ilya Yunus:
The metabolic pathway collection from EMP: the enzymes and metabolic pathways database. 26-28 - Manfred Kröger, Ralf Wahl:
Compilation of DNA sequences of Escherichia coli K12 (ECD and ECDC; update 1995). 29-31 - Peter D. Karp
, Monica Riley, Suzanne M. Paley, Alida Pellegrini-Toole:
EcoCyc: an encyclopedia of Escherichia coli genes and metabolism. 32-39 - Monica Riley, David B. Space:
Genes and proteins of Escherichia coli (GenProtEc). 40 - Guy Perrière, Ivan Moszer, Takashi Gojobori:
NRSub: a non-redundant database for Bacillus subtilis. 41-45 - James I. Garrels:
YPD-A database for the proteins of Saccharomyces cerevisiae. 46-49 - Reinhard Dölz, Marie-Odile Mossé, Piotr P. Slonimski, Amos Bairoch
, Patrick Linder:
LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces. 50-52 - Kenneth H. Fasman, Stanley Letovsky, Robert W. Cottingham
, David T. Kingsbury:
Improvements to the GDB Human Genome Data Base. 57-63 - Maria Giuseppina Campi, Paolo Romano
, Edward Thüroff, Paola Visconti, Maria Assunta Manniello, Beatrice Iannotta, Gabriella Rondanina, Francesco Molina, Tiziana Ruzzon, Leonardo Santi:
Molecular probe data base (MPDB). 64-67 - Mathias Sprinzl, Clemens Steegborn, Frank Hübel, Sergey Steinberg:
Compilation of tRNA sequences and sequences of tRNA genes. 68-72 - Jian Gu
, Ram Reddy:
Small RNA database. 73-75 - Christian Zwieb:
The uRNA database. 76-79 - Niels Larsen, Christian Zwieb:
The Signal Recognition Particle Database (SRPDB). 80-81 - Bonnie L. Maidak, Gary J. Olsen, Niels Larsen, Ross A. Overbeek, Michael J. McCaughey, Carl R. Woese:
The Ribosomal Database Project (RDP). 82-85 - Yves Van de Peer
, Stefan Nicolaï, Peter De Rijk, Rupert De Wachter:
Database on the structure of small ribosomal subunit RNA. 86-91 - Peter De Rijk, Yves Van de Peer
, Rupert De Wachter:
Database on the structure of large ribosomal subunit RNA. 92-97 - Pamela F. Crain, James A. McCloskey:
The RNA modification database. 98-99 - Adam I. Wacey, Geoffrey Kemball-Cook, Haig H. Kazazian, Stylianos E. Antonarakis
, Rainer Schwaab, Peter Lindley, Edward G. D. Tuddenham
:
The haemophilia A mutation search test and resource site, home page of the factor VIII mutation database: HAMSTeRS. 100-102 - F. Giannelli, P. M. Green, S. S. Sommer, M.-C. Poon, M. Ludwig, Rainer Schwaab, Pieter H. Reitsma, M. Goossens, A. Yoshioka, George G. Brownlee:
Haemophilia B (sixth edition): a database of point mutations and short additions and deletions. 103-118 - Neal F. Cariello, George R. Douglas, Thierry Soussi
:
Databases and software for the analysis of mutations in the human p53 gene, the human hprt gene and the lacZ gene in transgenic rodents. 119-120 - Christophe Béroud
, Thierry Soussi
:
APC gene: database of germline and somatic mutations in human tumors and cell lines. 121-124 - Timothy D. Kierstead, James M. Pipas:
Database of mutations that alter the large tumor antigen in simian virus 40. 125-126 - Liem Hoang, Susan Byck, Lynne Prevost, Charles R. Scriver:
PAH Mutation Analysis Consortium Database: a database for disease- producing and other allelic variation at the human PAH locus. 127-131 - Xavier Cousin
, Thierry Hotelier, Philippe Liévin, Jean-Pierre Toutant, Arnaud Chatonnet
:
A cholinesterase genes server (ESTHER): a database of cholinesterase- related sequences for multiple alignments, phylogenetic relationships, mutations and structural data retrieval. 132-136 - Gwenaëlle Collod, Christophe Béroud
, Thierry Soussi
, Claudine Junien, Catherine Boileau
:
Software and database for the analysis of mutations in the human FBN1 gene. 137-140 - M. Hollstein, Benny Shomer, M. Greenblatt, Thierry Soussi
, Eivind Hovig
, R. Montesano, C. C. Harris:
Somatic point mutations in the p53 gene of human tumors and cell lines: updated compilation. 141-146 - Christophe Béroud
, Frédérique Verdier, Thierry Soussi
:
p53 gene mutation: software and database. 147-150 - Bruce Gottlieb, Mark Trifiro, Rose Lumbroso, D. Marie Vasiliou, Leonard Pinsky:
The androgen receptor gene mutations database. 151-154 - Mark Danielsen
, Elisabeth Martinez:
The glucocorticoid receptor resource. 155-156 - Pieter H. Reitsma:
Protein C deficiency: summary of the 1995 database update. 157-159 - Mauno Vihinen
, Tsutomu Iwata, Christine Kinnon, Sau-Ping Kwan, Hans D. Ochs, Igor Vorechovsky, C. I. Edvard Smith:
BTKbase, mutation database for X-linked agammaglobulinemia (XLA). 160-165 - Kathleen L. Triman:
The 16S ribosomal RNA mutation database (16SMDB). 166-168 - Kathleen L. Triman:
The 23S Ribosomal RNA Mutation Database (23SMDB). 169-171 - Franklin Hutchinson, J. Edward Donnellan Jr.:
A general database for DNA sequence changes induced by mutagenesis of several bacterial and mammalian genes. 172-176 - Andreas M. Kogelnik, Marie T. Lott
, Michael D. Brown, Shamkant B. Navathe, Douglas C. Wallace:
MITOMAP: a human mitochondrial genome database. 177-179 - Ron D. Appel, Jean-Charles Sanchez, Amos Bairoch
, Olivier Golaz, Florence Ravier, Christian Pasquali, Graham J. Hughes, Denis F. Hochstrasser:
The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis, its status in 1995. 180-181 - Terri K. Attwood, Michael E. Beck, Alan J. Bleasby, Kirill Degtyarenko, David J. Parry-Smith:
Progress with the PRINTS protein fingerprint database. 182-188 - Amos Bairoch
, Philipp Bucher, Kay Hofmann
:
The PROSITE database, its status in 1995. 189-196 - Shmuel Pietrokovski
, Jorja G. Henikoff, Steven Henikoff
:
The Blocks database--a system for protein classification. 197-200 - Reinhard Schneider, Chris Sander:
The HSSP database of protein structure-sequence alignments. 201-205 - Liisa Holm
, Chris Sander:
The FSSP database: fold classification based on structure-structure alignment of proteins. 206-209 - János Murvai, Andrei E. Gabrielian, Péter Fábián, Zsolt Hátsági, Kirill Degtyarenko, Hedvig Hegyi, Sándor Pongor:
The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence segments. 210-213 - Yasukazu Nakamura
, Ken-nosuke Wada, Yoshiko Wada, Hirofumi Doi, Shigehiko Kanaya, Takashi Gojobori, Toshimichi Ikemura:
Condon usage tabulated from the international DNA sequence databases. 214-215 - Mark E. Dalphin
, Chris M. Brown, Peter A. Stockwell, Warren Tate:
TransTerm: a database of translational signals. 216-218 - Bruce Collier, Mark Danielsen
:
GRBase, a database linking information on proteins involved in gene regulation. 219-220 - Amos Bairoch
:
The ENZYME data bank in 1995. 221-222 - Richard J. Roberts
, Dana Macelis:
REBASE--restriction enzymes and methylases. 223-235 - James W. Brown:
The Ribonuclease P Database. 236-237 - Edgar Wingender
, P. Dietze, Holger Karas, Rainer Knüppel:
TRANSFAC: a database on transcription factors and their DNA binding sites. 238-241 - Vladimir Brusic
, George B. Rudy, Anthony P. Kyne, Leonard C. Harrison:
MHCPEP--a database of MHC-binding peptides: update 1995. 242-244 - Andreas D. Baxevanis, David Landsman
:
Histone Sequence Database: a compilation of highly-conserved nucleoprotein sequences. 245-247 - Jan E. Hansen, Ole Lund
, Jens O. Nielsen, John-E. S. Hansen, Søren Brunak
:
O-GLYCBASE: a revised database of O-glycosylated proteins. 248-252
Volume 24, Number 13, July 1996
- Neela Swaminathan, David A. Mead
, Karolyn McMaster, David George, James L. Van Etten, Piotr M. Skowron
:
Molecular cloning of the three base restriction endonuclease R.CviJI from eukaryotic Chlorella virus IL-3A. 2463-2469 - Jinsuk Woo, Rich B. Meyer Jr., Howard B. Gamper:
G/C-modified oligodeoxynucleotides with selective complementarity: synthesis and hybridization properties. 2470-2475 - Fred van Leeuwen, Eric R. Wijsman, Esther Kuyl-Yeheskiely, Gijs A. van der Marel, Jacques H. van Boom, Piet Borst:
The telomeric GGGTTA repeats of Trypanosoma brucei contain the hypermodified base J in both strands. 2476-2482 - Alexei G. Veselkov, Vadim V. Demidov, Peter E. Nielsen, Maxim D. Frank-Kamenetskii:
A new class of genome rare cutters. 2483-2487 - Aidan J. Doherty
, Louise C. Serpell
, Chris P. Ponting
:
The helix-hairpin-helix DNA-binding motif: a structural basis for non- sequence-specific recognition of DNA. 2488-2497 - Alexander Aronshtam, M. G. Marinus:
Dominant negative mutator mutations in the mutL gene of Escherichia coli. 2498-2504 - Hieronim Jakubowski
:
Proofreading in trans by an aminoacyl-tRNA synthetase: a model for single site editing by isoleucyl-tRNA synthetase. 2505-2510 - Terry Rogers Bishop, Miles W. Miller, Jennifer Beall, Leonard I. Zon, Peter Dierks:
Genetic regulation of delta-aminolevulinate dehydratase during erythropoiesis. 2511-2518 - Ulrich Güldener
, Susanne Heck, Thomas Fiedler, Jens Beinhauer, Johannes H. Hegemann:
A new efficient gene disruption cassette for repeated use in budding yeast. 2519-2524 - Gabriel Gutiérrez
, Lorenzo Márquez, Antonio Marín:
Preference for guanosine at first codon position in highly expressed Escherichia coli genes. A relationship with translational efficiency. 2525-2527 - Thorsten Schmidt, Martin Zörnig, Ralph Beneke, Tarik Möröy:
MoMuLV proviral integrations identified by Sup-F selection in tumors from infected myc/pim bitransgenic mice correlate with activation of the gfi-1 gene. 2528-2534 - Renata Gattoni, Dominique Mahé, Philippe Mähl, Nadine Fischer, Marie-Geneviève Mattei, James Stévenin, Jean-Paul Fuchs:
The human hnRNP-M proteins: structure and relation with early heat shock-induced splicing arrest and chromosome mapping. 2535-2542 - Jörg Köhler, Sabine Schäfer-Preuss, Detlev Buttgereit:
Related enhancers in the intron of the beta1 tubulin gene of Drosophila melanogaster are essential for maternal and CNS-specific expression during embryogenesis. 2543-2550 - Peter J. van der Spek
, André Eker, Suzanne Rademakers, Cécile Visser, Kaoru Sugasawa, Chikahide Masutani
, Fumio Hanaoka, Dirk Bootsma, Jan H. J. Hoeijmakers:
XPC and human homologs of RAD23: intracellular localization and relationship to other nucleotide excision repair complexes. 2551-2559 - Zu-Wen Sun, Amy Tessmer, Michael Hampsey:
Functional interaction between TFIIB and the Rpb9 (Ssu73) subunit of RNA polymerase II in Saccharomyces cerevisiae. 2560-2566 - Steven J. McBryant, Benjamin Gedulin, Karen R. Clemens, Peter E. Wright
, Joel M. Gottesfeld
:
Assessment of major and minor groove DNA interactions by the zinc fingers of Xenopus transcription factor IIIA. 2567-2574 - Xin Zhang, Robert Schleif
:
Obligatory activator-polymerase addition order at promoters. 2575-2577 - Kerstin Sollerbrant, G. Chinnadurai, Catharina Svensson:
The CtBP binding domain in the adenovirus E1A protein controls CR1- dependent transactivation. 2578-2584 - Martin Ohnacker, Lionel Minvielle-Sebastia, Walter Keller:
The Schizosaccharomyces pombe pla1 gene encodes a poly(A) polymerase and can functionally replace its Saccharomyces cerevisiae homologue. 2585-2591 - Matthias Grüne, Jens P. Fürste, Sven Klußmann, Volker A. Erdmann, Larry R. Brown:
Detection of multiple conformations of the E-domain of 5S rRNA from Escherichia coli in solution and in crystals by NMR spectroscopy. 2592-2596 - Peter C. Creaser, David A. D'Argenio, Trevor Williams:
Comparative and functional analysis of the AP2 promoter indicates that conserved octamer and initiator elements are critical for activity. 2597-2605 - Chin-Yi Huang, Guixia Bi, Paul S. Miller:
Triplex formation by oligonucleotides containing novel deoxycytidine derivatives [published erratum appears in Nucleic Acids Res 1997 Sep 15;25(18): following 3750]. 2606-2613 - Chenyan Wu, Shigui Zhu, Stacey Simpson, Pieter J. de Jong:
DOP-vector PCR: a method for rapid isolation and sequencing of insert termini from PAC clones. 2614-2615 - Tracy Money, Steve Reader, Li Jia Qu, Roy P. Dunford, Graham Moore:
AFLP-based mRNA fingerprinting. 2616-2617 - Marcel Beld, Cees Sol, Jaap Goudsmit, René Boom:
Fractionation of nucleic acids into single-stranded and double-stranded forms. 2618-2619 - Wei Xiao, Janet L. Brandsma:
High efficiency, long-term clinical expression of cottontail rabbit papillomavirus (CRPV) DNA in rabbit skin following particle-mediated DNA transfer. 2620-2622 - Susan J. Ahn, José Costa, Janet Rettig Emanuel:
PicoGreen quantitation of DNA: effective evaluation of samples pre- or post-PCR. 2623-2625
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