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Medical Image Analysis, Volume 13
Volume 13, Number 1, February 2009
- Fan Zhang, Edwin R. Hancock

, Casey Goodlett, Guido Gerig
:
Probabilistic white matter fiber tracking using particle filtering and von Mises-Fisher sampling. 5-18 - Marcos Martín-Fernández

, Emma Muñoz-Moreno
, Leila Cammoun, Jean-Philippe Thiran
, Carl-Fredrik Westin, Carlos Alberola-López
:
Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data. 19-35 - Stathis Hadjidemetriou, Colin Studholme, Susanne G. Mueller, Michael Weiner, Norbert Schuff:

Restoration of MRI data for intensity non-uniformities using local high order intensity statistics. 36-48 - Xiaoning Qian, Matthew P. Brennan, Donald P. Dione, Wawrzyniec L. Dobrucki

, Marcel Jackowski, Christopher K. Breuer
, Albert J. Sinusas, Xenophon Papademetris:
A non-parametric vessel detection method for complex vascular structures. 49-61 - Gil Zwirn, Ronen Beeri

, Dan Gilon, Zvi Friedman, Solange Akselrod:
Quantitative evaluation of local myocardial blood volume in contrast echocardiography. 62-79 - Stephen L. Keeling, Thomas Kogler, Rudolf Stollberger

:
Deconvolution for DCE-MRI using an exponential approximation basis. 80-90 - Misael Rosales, Petia Radeva

, Oriol Rodriguez-Leor
, Debora Gil
:
Modelling of image-catheter motion for 3-D IVUS. 91-104 - Bruce S. Spottiswoode, Xiaodong Zhong

, Christine H. Lorenz, Bongani M. Mayosi
, Ernesta M. Meintjes
, Frederick H. Epstein:
Motion-guided segmentation for cine DENSE MRI. 105-115 - Jean-François Deprez, Elisabeth Brusseau, Cédric Schmitt, Guy Cloutier, Olivier Basset:

3D estimation of soft biological tissue deformation from radio-frequency ultrasound volume acquisitions. 116-127
- Ross T. Whitaker:

Editorial. 131 - Jérôme Boulanger, Charles Kervrann, Patrick Bouthemy:

A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery. 132-142 - Dirk Ryan Padfield, Jens Rittscher

, Nick Thomas, Badrinath Roysam:
Spatio-temporal cell cycle phase analysis using level sets and fast marching methods. 143-155 - Kishore Mosaliganti, Firdaus Janoos, M. Okan Irfanoglu, Randall Ridgway, Raghu Machiraju, Kun Huang, Joel H. Saltz, Gustavo Leone, Michael C. Ostrowski

:
Tensor classification of N-point correlation function features for histology tissue segmentation. 156-166 - Firdaus Janoos, Kishore Mosaliganti, Xiaoyin Xu, Raghu Machiraju, Kun Huang, Stephen T. C. Wong:

Robust 3D reconstruction and identification of dendritic spines from optical microscopy imaging. 167-179 - Elizabeth Jurrus, Melissa Hardy, Tolga Tasdizen, P. Thomas Fletcher, Pavel Koshevoy, Chi-Bin Chien, Winfried Denk, Ross T. Whitaker:

Axon tracking in serial block-face scanning electron microscopy. 180-188
Volume 13, Number 2, April 2009
- Hesheng Wang

, Baowei Fei
:
A modified fuzzy C-means classification method using a multiscale diffusion filtering scheme. 193-202 - Maxime Boucher, Sue Whitesides, Alan C. Evans

:
Depth potential function for folding pattern representation, registration and analysis. 203-214 - Ravi Bansal, Lawrence H. Staib

, Andrew F. Laine, Dongrong Xu, Jun Liu, Lainie F. Posecion, Bradley S. Peterson:
Calculation of the confidence intervals for transformation parameters in the registration of medical images. 215-233 - Zeike A. Taylor

, Olivier Comas, Mario Cheng, Josh Passenger, David J. Hawkes, David Atkinson
, Sébastien Ourselin
:
On modelling of anisotropic viscoelasticity for soft tissue simulation: Numerical solution and GPU execution. 234-244 - Itay Cohen, Dan Gordon:

VS: A surface-based system for topological analysis, quantization and visualization of voxel data. 245-256 - Stephan Witoszynskyj, Alexander Rauscher

, Jürgen R. Reichenbach
, Markus Barth
:
Phase unwrapping of MR images using ΦUN - A fast and robust region growing algorithm. 257-268 - Marietta L. J. Scott, Paul A. Bromiley

, Neil A. Thacker, Charles E. Hutchinson, Alan Jackson
:
A fast, model-independent method for cerebral cortical thickness estimation using MRI. 269-285 - Lujie Chen, Graham M. Treece, Joel E. Lindop, Andrew H. Gee, Richard W. Prager

:
A quality-guided displacement tracking algorithm for ultrasonic elasticity imaging. 286-296 - Marcel Prastawa

, Elizabeth Bullitt, Guido Gerig
:
Simulation of brain tumors in MR images for evaluation of segmentation efficacy. 297-311 - Piotr M. Szczypinski

, Ram D. Sriram, Parupudi V. J. Sriram, D. Nageshwar Reddy:
A model of deformable rings for interpretation of wireless capsule endoscopic videos. 312-324 - William J. Godinez

, Marko Lampe
, Stefan Wörz
, Barbara Müller
, Roland Eils
, Karl Rohr:
Deterministic and probabilistic approaches for tracking virus particles in time-lapse fluorescence microscopy image sequences. 325-342
- Frank B. Sachse

, Gunnar Seemann:
Special issue: Functional imaging and modelling of the heart. 345 - Wilco Kroon, Tammo Delhaas

, Peter Bovendeerd, Theo Arts:
Computational analysis of the myocardial structure: Adaptation of cardiac myofiber orientations through deformation. 346-353 - Nikhil S. Phatak, Steve A. Maas, Alexander I. Veress

, Nathan A. Pack, Edward V. R. Di Bella
, Jeffrey A. Weiss:
Strain measurement in the left ventricle during systole with deformable image registration. 354-361 - Roy Kerckhoffs, Andrew D. McCulloch, Jeffrey H. Omens, Lawrence J. Mulligan:

Effects of biventricular pacing and scar size in a computational model of the failing heart with left bundle branch block. 362-369 - Mihaela Pop, Maxime Sermesant

, Damien Lepiller, Michael V. Truong, Elliot R. McVeigh, Eugene Crystal, Alexander Dick, Herve Delingette
, Nicholas Ayache, Graham A. Wright:
Fusion of optical imaging and MRI for the evaluation and adjustment of macroscopic models of cardiac electrophysiology: A feasibility study. 370-380
Volume 13, Number 3, June 2009
- Roger C. Tam

, Andrew Riddehough, David K. B. Li:
Detection and measurement of coverage loss in interleaved multi-acquisition brain MRIs due to motion-induced inter-slice misalignment. 381-391 - Jong-Hwan Lee

, Matthew Marzelli, Ferenc A. Jolesz, Seung-Schik Yoo:
Automated classification of fMRI data employing trial-based imagery tasks. 392-404 - Carole Frindel

, Marc C. Robini, Pierre Croisille
, Yue-Min Zhu
:
Comparison of regularization methods for human cardiac diffusion tensor MRI. 405-418 - Andrew P. King, Redha Boubertakh

, Kawal S. Rhode
, YingLiang Ma
, Phani Chinchapatnam, Gang Gao, T. Tangcharoen, Matthew Ginks, Michael Cooklin, Jaswinder S. Gill, David J. Hawkes, Reza Razavi
, Tobias Schaeffter
:
A subject-specific technique for respiratory motion correction in image-guided cardiac catheterisation procedures. 419-431 - Yogesh Rathi, Oleg V. Michailovich, Martha Elizabeth Shenton, Sylvain Bouix

:
Directional functions for orientation distribution estimation. 432-444 - Rebecca Kokes, Kevin Lister, Rao P. Gullapalli, Bao Zhang, Alan MacMillan, Howard Richard, Jaydev P. Desai:

Towards a teleoperated needle driver robot with haptic feedback for RFA of breast tumors under continuous MRI. 445-455 - Cybèle Ciofolo

, Christian Barillot:
Atlas-based segmentation of 3D cerebral structures with competitive level sets and fuzzy control. 456-470 - Tobias Klinder, Jörn Ostermann

, Matthias Ehm, Astrid Franz, Reinhard Kneser, Cristian Lorenz:
Automated model-based vertebra detection, identification, and segmentation in CT images. 471-482 - Fei Zhao, Honghai Zhang, Andreas Wahle, Matthew T. Thomas, Alan Stolpen

, Thomas D. Scholz
, Milan Sonka
:
Congenital aortic disease: 4D magnetic resonance segmentation and quantitative analysis. 483-493 - Stéphane Nicolau, Xavier Pennec

, Luc Soler, Xavier Buy
, Afshin Gangi
, Nicholas Ayache
, Jacques Marescaux:
An augmented reality system for liver thermal ablation: Design and evaluation on clinical cases. 494-506 - Ivica Kopriva, Antun Persin:

Unsupervised decomposition of low-intensity low-dimensional multi-spectral fluorescent images for tumour demarcation. 507-518 - Guillaume Piliere, Mark H. Van Horn, Robert Dixon, Joseph Stavas, Stephen R. Aylward

, Elizabeth Bullitt:
Vessel target location estimation during the TIPS procedure. 519-529 - Péter Varga

, P. K. Zysset:
Sampling sphere orientation distribution: An efficient method to quantify trabecular bone fabric on grayscale images. 530-541
- LinLin Shen, Li Bai, Dorothee Auer

:
Erratum to "3D Gabor wavelets for evaluating SPM normalization algorithm". 542
Volume 13, Number 4, August 2009
- Tobias Heimann, Hans-Peter Meinzer:

Statistical shape models for 3D medical image segmentation: A review. 543-563 - Rachid Deriche

, Jeff Calder
, Maxime Descoteaux:
Optimal real-time Q-ball imaging using regularized Kalman filtering with incremental orientation sets. 564-579 - Ravi Bansal, Lawrence H. Staib

, Dongrong Xu, Andrew F. Laine, Jun Liu, Bradley S. Peterson:
Using Perturbation theory to reduce noise in diffusion tensor fields. 580-597 - Benoît Naegel, Alexandru Cernicanu, Jean-Noël Hyacinthe

, Maurizio Tognolini, Jean-Paul Vallée
:
SNR enhancement of highly-accelerated real-time cardiac MRI acquisitions based on non-local means algorithm. 598-608 - Yangming Ou

, Dinggang Shen, Jianchao Zeng, Leon Sun, Judd W. Moul, Christos Davatzikos
:
Sampling the spatial patterns of cancer: Optimized biopsy procedures for estimating prostate cancer volume and Gleason Score. 609-620 - Daisuke Deguchi

, Kensaku Mori
, Marco Feuerstein, Takayuki Kitasaka, Calvin R. Maurer Jr., Yasuhito Suenaga, Hirotsugu Takabatake, Masaki Mori, Hiroshi Natori:
Selective image similarity measure for bronchoscope tracking based on image registration. 621-633 - Renaud Lopes, Nacim Betrouni

:
Fractal and multifractal analysis: A review. 634-649 - Clara I. Sánchez, María García

, Agustín Mayo
, María Isabel López, Roberto Hornero
:
Retinal image analysis based on mixture models to detect hard exudates. 650-658 - Songbai Ji, David W. Roberts, Alex Hartov, Keith D. Paulsen:

Brain-skull contact boundary conditions in an inverse computational deformation model. 659-672 - Patrick Schiavone, Fabrice Chassat, Thomas Boudou

, Emmanuel Promayon
, F. Valdivia, Yohan Payan
:
In vivo measurement of human brain elasticity using a light aspiration device. 673-678
Volume 13, Number 5, October 2009
- Igor Yanovsky

, Alex D. Leow, Suh Lee, Stanley J. Osher, Paul M. Thompson
:
Comparing registration methods for mapping brain change using tensor-based morphometry. 679-700 - Michiel Schaap, Coert Metz, Theo van Walsum

, Alina G. van der Giessen, Annick C. Weustink, Nico Mollet, Christian Bauer, Hrvoje Bogunovic
, Carlos Castro-Gonzalez
, Xiang Deng, Engin Dikici, Thomas O'Donnell, Michel Frenay, Ola Friman, Marcela Hernández Hoyos, Pieter H. Kitslaar, Karl Krissian, Caroline Kühnel, Miguel A. Luengo-Oroz
, Maciej Orkisz
, Örjan Smedby
, Martin Styner
, Andrzej Szymczak, Hüseyin Tek, Chunliang Wang, Simon K. Warfield
, Sebastian Zambal, Yong Zhang, Gabriel P. Krestin, Wiro J. Niessen
:
Standardized evaluation methodology and reference database for evaluating coronary artery centerline extraction algorithms. 701-714 - Haz-Edine Assemlal, David Tschumperlé, Luc Brun

:
Efficient and robust computation of PDF features from diffusion MR signal. 715-729 - Oscar Acosta

, Pierrick Bourgeat
, Maria A. Zuluaga
, Jurgen Fripp
, Olivier Salvado
, Sébastien Ourselin
:
Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps. 730-743 - Songbai Ji, Alex Hartov, David W. Roberts, Keith D. Paulsen:

Data assimilation using a gradient descent method for estimation of intraoperative brain deformation. 744-756 - Keelin Murphy

, Bram van Ginneken
, Arnold M. R. Schilham, Bartjan de Hoop, H. A. Gietema, Mathias Prokop
:
A large-scale evaluation of automatic pulmonary nodule detection in chest CT using local image features and k-nearest-neighbour classification. 757-770
- Dimitris N. Metaxas, Leon Axel

:
Editorial. 771-772 - Vicky Y. Wang, Hoi Ieng Lam, Daniel B. Ennis

, Brett R. Cowan, Alistair A. Young
, Martyn P. Nash
:
Modelling passive diastolic mechanics with quantitative MRI of cardiac structure and function. 773-784 - Gert Schoonenberg, Raoul Florent, Pierre Lelong, Onno Wink, Daniel Ruijters

, John D. Carroll, Bart M. ter Haar Romeny
:
Projection-based motion compensation and reconstruction of coronary segments and cardiac implantable devices using rotational X-ray angiography. 785-792 - Stanley Durrleman

, Xavier Pennec
, Alain Trouvé, Nicholas Ayache
:
Statistical models of sets of curves and surfaces based on currents. 793-808 - William Harvey Greene, Sudhakar Chelikani, Kailas Purushothaman, J. P. S. Knisely, Zhe Chen, Xenophon Papademetris, Lawrence H. Staib

, James S. Duncan:
Constrained non-rigid registration for use in image-guided adaptive radiotherapy. 809-817
Volume 13, Number 6, December 2009
- David Lesage, Elsa D. Angelini

, Isabelle Bloch, Gareth Funka-Lea:
A review of 3D vessel lumen segmentation techniques: Models, features and extraction schemes. 819-845 - Uwe Jandt, Dirk Schäfer, Michael Grass, Volker Rasche

:
Automatic generation of 3D coronary artery centerlines using rotational X-ray angiography. 846-858 - Meindert Niemeijer, Michael D. Abràmoff

, Bram van Ginneken
:
Fast detection of the optic disc and fovea in color fundus photographs. 859-870 - László Ruskó, György Bekes, Márta Fidrich

:
Automatic segmentation of the liver from multi- and single-phase contrast-enhanced CT images. 871-882 - Guoyan Zheng

, Sebastian Gollmer, Steffen Schumann, Xiao Dong, Thomas Feilkas, Miguel Ángel González Ballester
:
A 2D/3D correspondence building method for reconstruction of a patient-specific 3D bone surface model using point distribution models and calibrated X-ray images. 883-899 - A. Kalemis, David M. Binnie, Maggie A. Flower, R. J. Ott:

Image intensity normalisation by maximising the Siddon line integral in the joint intensity distribution space. 900-909
- Marcos Martín-Fernández

, Emma Muñoz-Moreno
, Leila Cammoun, Jean-Philippe Thiran
, Carl-Fredrik Westin, Carlos Alberola-López
:
Addendum to "Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data" [Medical Image Analysis 13 (2009) 19-35]. 910
- Karol Miller:

Editorial. 911 - Grand Roman Joldes, Adam Wittek

, Karol Miller
:
Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation. 912-919 - Guangqiang Geng, Leigh A. Johnston

, Edwin Yan, Joanne M. Britto, David W. Smith
, David W. Walker, Gary F. Egan
:
Biomechanisms for modelling cerebral cortical folding. 920-930 - Tauseef ur Rehman, Eldad Haber, Gallagher Pryor, John Melonakos, Allen R. Tannenbaum:

3D nonrigid registration via optimal mass transport on the GPU. 931-940

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