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International Journal of Computational Biology and Drug Design (IJCBDD), Volume 1
Volume 1, Number 1, 2008
- Guo-Zheng Li, Jack Y. Yang, Wen-Cong Lu, Dan Li, Mary Qu Yang:

Improving prediction accuracy of drug activities by utilising unlabelled instances with feature selection. 1-13 - Liangjiang Wang, Stephanie Jimenez Irausquin, Jack Y. Yang:

Prediction of lipid-interacting amino acid residues from sequence features. 14-25 - Mohieddine Missaoui

, David R. C. Hill, Pierre Peyret
:
A comparison of algorithms for a complete backtranslation of oligopeptides. 26-38 - Minseo Park, Deane L. Falcone, Karen M. Daniels:

Detection and prediction of alternative splicing in Arabidopsis thaliana. 39-58 - Xiaoli Li

, Jun-Xiang Lee, Bharadwaj Veeravalli, See-Kiong Ng:
Inferring Transcription Factor interactions using a novel HV-SVM classifier. 59-73 - Kenneth Sundberg, Timothy O'Connor

, Hyrum Carroll, Mark J. Clement, Quinn Snell:
Parsimony accelerated Maximum Likelihood searches. 74-87 - Swapnoneel Roy, Ashok Kumar Thakur:

Approximate strip exchanging. 88-101
Volume 1, Number 2, 2008
- Shibin Qiu, Terran Lane:

siRNA silencing efficacy prediction using the RNA string kernel. 103-121 - Abdellali Kelil

, Shengrui Wang, Ryszard Brzezinski
:
CLUSS2: an alignment-independent algorithm for clustering protein families with multiple biological functions. 122-140 - Haiying Wang

, Huiru Zheng
, Jinglu Hu:
Poisson approach to clustering analysis of regulatory sequences. 141-157 - Hyung-Won Koh, Lars Hildebrand:

A Bottom-Up Approach to the Biclustering-Problem. 158-173 - Vinhthuy Phan, Kriangsiri Malasri:

BioTDMS: a general-purpose system for integrative management of bioinformatics tools and data. 174-184 - Huitao Sheng, Kishan Mehrotra, Chilukuri K. Mohan, Ramesh Raina:

A motif extraction algorithm based on hashing and modulo-4 arithmetic. 185-199 - Zoé Lacroix, Christophe Legendre:

BIPASS: Design of alternative splicing services. 200-217
Volume 1, Number 3, 2008
- Jonathan L. Jesneck, Jack Y. Yang:

Promoting synergistic research and education in computational biology and drug design. 219-223 - Ayca C. Pehlivanli, Turgay Ibrikci, Okan K. Ersoy:

Consensual classification of drug and nondrug compounds. 224-234 - Patrick Shaughnessy, Gary Livingston, Michael V. Graves:

Towards predicting Protein-Protein Interactions in novel organisms. 235-253 - Chao Zhang

, Trupti Joshi
, Guan Ning Lin, Dong Xu:
An integrated probabilistic approach for gene function prediction using multiple sources of high-throughput data. 254-274 - Amira Djebbari, Ziying Liu, Sieu Phan, Fazel Famili:

An ensemble machine learning approach to predict survival in breast cancer. 275-294 - Christopher M. Frenz, Philippe P. Lefebvre:

Molecular modelling insights into DFNA15 mediated enhancement of POU4F3 stability. 295-301 - Carol Lushbough, Michael K. Bergman, Carolyn J. Lawrence

, Douglas M. Jennewein, Volker Brendel:
Implementing bioinformatic workflows within the BioExtract Server. 302-312 - Ning Weng, Benfano Soewito

:
Evaluating DNA sequence searching algorithms on multicore. 313-327
Volume 1, Number 4, 2008
- Pan Du, Simon M. Lin, Mary Qu Yang, Jack Y. Yang:

2009 and beyond: the decade of personalised medicine. 329-333 - Tian-Yu Liu, Guo-Zheng Li, Jack Y. Yang, Mary Qu Yang:

Feature selection for the imbalanced QSAR problems by using EasyEnsemble. 334-346 - Ankit Agrawal

, Volker Brendel, Xiaoqiu Huang:
Pairwise statistical significance and empirical determination of effective gap opening penalties for protein local sequence alignment. 347-367 - Nathan E. Wineinger, Richard E. Kennedy

, Stephen W. Erickson, Mary K. Wojczynski
, Carl E. Bruder, Hemant K. Tiwari:
Statistical issues in the analysis of DNA Copy Number Variations. 368-395 - Chia-Ju Lee, Dong Fu, Pan Du, Hongmei Jiang, Simon M. Lin, Warren A. Kibbe

:
A divide-and-conquer strategy to solve the out-of-memory problem of processing thousands of Affymetrix microarrays. 396-405 - Michael Lawrence:

Software for the interactive visualisation of experimental data in the genomic context. 406-421 - Bo-ra Hyun, Hwiesung Jung, Woo-Hyuk Jang, Suk Hoon Jung, Dong-Soo Han

:
Weighted feature value based Drug Target Protein prediction. 422-433 - Ayca C. Pehlivanli, Okan K. Ersoy, Turgay Ibrikci:

Drug/nondrug classification with consensual Self-Organising Map and Self-Organising Global Ranking algorithms. 434-445

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