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ORCIDComputer Physics Communications, Volume 235
Volume 235, February 2019
- John Gounley
, Madhurima Vardhan, Amanda Randles:
A framework for comparing vascular hemodynamics at different points in time. 1-8 - Shinya Maeyama, Tomohiko Watanabe, Yasuhiro Idomura, Motoki Nakata, Masanori Nunami:
Implementation of a gyrokinetic collision operator with an implicit time integration scheme and its computational performance. 9-15 - Vyacheslav Olshevsky, Fabio Bacchini, Stefaan Poedts, Giovanni Lapenta:
Slurm: Fluid particle-in-cell code for plasma modeling. 16-24 - Lin Fu:
A low-dissipation finite-volume method based on a new TENO shock-capturing scheme. 25-39 - Matteo Patriarca, Patricio Farrell, Jürgen Fuhrmann, Thomas Koprucki:
Highly accurate quadrature-based Scharfetter-Gummel schemes for charge transport in degenerate semiconductors. 40-49 - Charles E. Starrett, N. M. Gill, Travis Sjostrom, C. W. Greeff:
Wide ranging equation of state with Tartarus: A hybrid Green's function/orbital based average atom code. 50-62 - Philip Ortwein, Stephen M. Copplestone, Claus-Dieter Munz, Tilman Binder, Wladimir Reschke, Stefanos Fasoulas:
A particle localization algorithm on unstructured curvilinear polynomial meshes. 63-74 - Dongxin Pan, Chengwen Zhong, Congshan Zhuo, Sha Liu:
A two-stage fourth-order gas-kinetic scheme on unstructured hybrid mesh. 75-87 - Manaschai Kunaseth, Supa Hannongbua, Aiichiro Nakano:
Shift/collapse on neighbor list (SC-NBL): Fast evaluation of dynamic many-body potentials in molecular dynamics simulations. 88-94 - Zongrui Pei, Markus Eisenbach, Sai Mu, G. Malcolm Stocks:
Error controlling of the combined Cluster-Expansion and Wang-Landau Monte-Carlo method and its application to FeCo. 95-101 - Olga Shapoval, Jean-Luc Vay, Henri Vincenti:
Two-step perfectly matched layer for arbitrary-order pseudo-spectral analytical time-domain methods. 102-110 - Jinsu Park, Peng Zhang, Hyunsuk Lee, Sooyoung Choi, Jiankai Yu, Deokjung Lee:
Performance evaluation of CMFD on inter-cycle correlation reduction of Monte Carlo simulation. 111-119 - Tonatiuh Sánchez-Vizuet, Manuel E. Solano:
A Hybridizable Discontinuous Galerkin solver for the Grad-Shafranov equation. 120-132 - Menglong Zhao, Alex Chankin, David Coster:
An iterative algorithm of coupling the Kinetic Code for Plasma Periphery (KIPP) with SOLPS. 133-152 - Jian-Xiao Liu, Lu Ju, Peng Du, Yu-Jie Liu, Hong-Wei Yang:
An improved cascaded SO-FDTD method for high temperature magnetized plasma. 153-158 - Christoph Dalitz, Yassid Ayyad, Jens Wilberg, Lukas Aymans, Daniel Bazin, Wolfgang Mittig:
Automatic trajectory recognition in Active Target Time Projection Chambers data by means of hierarchical clustering. 159-168 - Bogdan Tanygin:
Langevin dynamics simulation with dipole-dipole interactions: Massive performance improvements and advanced analytical integrator. 169-178 - Lukas Exl, Johann Fischbacher, Alexander Kovacs, Harald Oezelt, Markus Gusenbauer, Thomas Schrefl:
Preconditioned nonlinear conjugate gradient method for micromagnetic energy minimization. 179-186 - Mauro Del Ben, Felipe H. da Jornada, Andrew Canning, Nathan Wichmann, Karthik Raman, Ruchira Sasanka, Chao Yang, Steven G. Louie, Jack Deslippe:
Large-scale GW calculations on pre-exascale HPC systems. 187-195 - Sheng Bi, Li Huang, Ning-Hua Tong:
Natural orbital-based Lanczos method for Anderson impurity models. 196-209 - Jiaxiang Cai, Yushun Wang, Chaolong Jiang:
Local structure-preserving algorithms for general multi-symplectic Hamiltonian PDEs. 210-220 - Thomas Hammerschmidt, Bernhard Seiser, Michael E. Ford, Alvin N. Ladines, Sebastian Schreiber, Ning Wang, Jan Jenke, Yury Lysogorskiy, Carlos Teijeiro, Matous Mrovec, M. Cak, E. R. Margine, D. G. Pettifor, Ralf Drautz:
BOPfox program for tight-binding and analytic bond-order potential calculations. 221-233 - Xiaofeng Yang, Jia Zhao:
Efficient linear schemes for the nonlocal Cahn-Hilliard equation of phase field models. 234-245 - D. Samaddar, David Coster, Xavier Bonnin, Lee A. Berry, Wael R. Elwasif, Donald B. Batchelor:
Application of the parareal algorithm to simulations of ELMs in ITER plasma. 246-257 - Tadeusz Tomczak, Roman G. Szafran:
A new GPU implementation for lattice-Boltzmann simulations on sparse geometries. 258-278 - Joshua P. Wilson:
Generalized Finite-Difference Time-Domain method with absorbing boundary conditions for solving the nonlinear Schrödinger equation on a GPU. 279-292 - Marcin Mazdziarz:
A comment on the article "Ab initio calculations of pressure-dependence of high-order elastic constants using finite deformations approach" by I. Mosyagin, A.V. Lugovskoy, O.M. Krasilnikov, Yu.Kh. Vekilov, S.I. Simak and I.A. Abrikosov [Computer Physics Communications 220 (2017) 20-30]. 293-294 - Igor Mosyagin, A. V. Lugovskoy, O. M. Krasilnikov, Yu. Kh. Vekilov, S. I. Simak, Igor A. Abrikosov:
Reply to the comment by M. Mazdziarz on the article "Ab initio calculations of pressure-dependence of high-order elastic constants using finite deformations approach" [Computer Physics Communications 220 (2017) 20-30]. 295-296
- Alfred C. K. Farris, Ying Wai Li, Markus Eisenbach:
Histogram-free multicanonical Monte Carlo sampling to calculate the density of states. 297-304 - Ioan Hadade, Feng Wang, Mauro Carnevale, Luca di Mare:
Some useful optimisations for unstructured computational fluid dynamics codes on multicore and manycore architectures. 305-323 - Nicola Giuliani:
BlackNUFFT: Modular customizable black box hybrid parallelization of type 3 NUFFT in 3D. 324-335 - Moritz Hütten, Céline Combet, David Maurin:
CLUMPY v3: γ-ray and ν signals from dark matter at all scales. 336-345 - Jacob R. King, Ilya V. Pogorelov, Keegan M. Amyx, Michael Borland, Robert Soliday:
GPU acceleration and performance of the particle-beam-dynamics code Elegant. 346-355 - Masashi Noda, Shunsuke A. Sato, Yuta Hirokawa, Mitsuharu Uemoto, Takashi Takeuchi, Shunsuke Yamada, Atsushi Yamada, Yasushi Shinohara, Maiku Yamaguchi, Kenji Iida, Isabella Floss, Tomohito Otobe, Kyung-Min Lee, Kazuya Ishimura, Taisuke Boku, George F. Bertsch, Katsuyuki Nobusada, Kazuhiro Yabana:
SALMON: Scalable Ab-initio Light-Matter simulator for Optics and Nanoscience. 356-365 - Nico Sanna, G. Morelli, Simone Orlandini, Isabella Baccarelli:
VOLSCAT2.0: The new version of the package for electron and positron scattering off molecular targets. 366-377 - O. P. Shemyakin, P. R. Levashov, P. A. Krasnova:
TFmix: A high-precision implementation of the finite-temperature Thomas-Fermi model for a mixture of atoms. 378-387 - Markus Wallerberger, Andreas Hausoel, Patrik Gunacker, Alexander Kowalski, Nicolaus Parragh, Florian Goth, Karsten Held, Giorgio Sangiovanni:
w2dynamics: Local one- and two-particle quantities from dynamical mean field theory. 388-399 - Stanislav Poslavsky:
Rings: An efficient Java/Scala library for polynomial rings. 400-413 - Adam Glos, Jaroslaw Adam Miszczak, Mateusz Ostaszewski:
QSWalk.jl: Julia package for quantum stochastic walks analysis. 414-421 - Yao-Lung L. Fang:
FDTD: Solving 1+1D delay PDE in parallel. 422-432 - J. Ekman, Per Jönsson, Michel R. Godefroid, C. Nazé, Gediminas Gaigalas, Jacek Bieron:
ris 4: A program for relativistic isotope shift calculations. 433-446 - Takahiro Misawa, Satoshi Morita, Kazuyoshi Yoshimi, Mitsuaki Kawamura, Yuichi Motoyama, Kota Ido, Takahiro Ohgoe, Masatoshi Imada, Takeo Kato:
mVMC - Open-source software for many-variable variational Monte Carlo method. 447-462 - Ludwig Schneider, Marcus Müller:
Multi-architecture Monte-Carlo (MC) simulation of soft coarse-grained polymeric materials: SOft coarse grained Monte-Carlo Acceleration (SOMA). 463-476 - Marlon Brenes, Vipin Kerala Varma, Antonello Scardicchio, Ivan Girotto:
Massively parallel implementation and approaches to simulate quantum dynamics using Krylov subspace techniques. 477-488 - Aleksander Jablonski:
The Chandrasekhar function for modeling photoelectron transport in solids. 489-501 - F. C. Bocquet, G. Mercurio, Markus Franke, G. van Straaten, Simon Weiß, S. Soubatch, Christian Kumpf, F. Stefan Tautz:
Torricelli: A software to determine atomic spatial distributions from normal incidence x-ray standing wave data. 502-513
- Daniel Winkler, Massoud Rezavand, Michael Meister, Wolfgang Rauch:
gpuSPHASE - A shared memory caching implementation for 2D SPH using CUDA (new version announcement). 514-516
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