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Computation, Volume 3
Volume 3, Number 1, March 2015
- Scott Christley, Chase Cockrell, Gary An:

Computational Studies of the Intestinal Host-Microbiota Interactome. 2-28 - Stephen Pankavich, Peter J. Ortoleva:

A Review of Two Multiscale Methods for the Simulation of Macromolecular Assemblies: Multiscale Perturbation and Multiscale Factorization. 29-57 - Ruth E. Falconer, Alasdair N. Houston:

Visual Simulation of Soil-Microbial System Using GPGPU Technology. 58-71 - Frank B. Dazzo, Brighid C. Niccum:

Use of CMEIAS Image Analysis Software to Accurately Compute Attributes of Cell Size, Morphology, Spatial Aggregation and Color Segmentation that Signify in Situ Ecophysiological Adaptations in Microbial Biofilm Communities. 72-98 - Daniel Aguilar-Hidalgo

, María Carmen Lemos
, Antonio Córdoba:
Evolutionary Dynamics in Gene Networks and Inference Algorithms. 99-113
Volume 3, Number 2, June 2015
- Orla Coleman, Ruth Hogan, Nicole McGoldrick, Niamh Rudden, James O. McInerney:

Evolution by Pervasive Gene Fusion in Antibiotic Resistance and Antibiotic Synthesizing Genes. 114-127 - John Kaiser Calautit

, Dominic O'Connor, Polytimi Sofotasiou, Ben Richard Hughes:
CFD Simulation and Optimisation of a Low Energy Ventilation and Cooling System. 128-149 - Rafael V. Carvalho

, Jeroen van den Heuvel, Jetty Kleijn, Fons J. Verbeek:
Coupling of Petri Net Models of the Mycobacterial Infection Process and Innate Immune Response. 150-176 - Raymond J. Moran, Claire C. Morgan, Mary J. O'Connell:

A Guide to Phylogenetic Reconstruction Using Heterogeneous Models - A Case Study from the Root of the Placental Mammal Tree. 177-196 - Simon Tanaka:

Simulation Frameworks for Morphogenetic Problems. 197-221 - Alexey A. Kislitsyn

, Rostislav Savinkov
, Mario Novkovic, Lucas Onder, Gennady Bocharov:
Computational Approach to 3D Modeling of the Lymph Node Geometry. 222-234 - Jérôme Frisch

, Ralf-Peter Mundani, Ernst Rank, Christoph van Treeck:
Engineering-Based Thermal CFD Simulations on Massive Parallel Systems. 235-261 - Julien Berthaut-Gerentes, Didier Delaunay:

LES: Unsteady Atmospheric Turbulent Layer Inlet. A Precursor Method Application and Its Quality Check. 262-273 - Kazuhiro Yamamoto, Yuki Takeuchi, Shinnosuke Nishiki:

Effects of a Sprinkler on Evacuation Dynamics in Fire. 274-284 - Anja Fischer

, Frank Fischer, Gerold Jäger, Jens Keilwagen
, Paul Molitor
, Ivo Grosse:
Computational Recognition of RNA Splice Sites by Exact Algorithms for the Quadratic Traveling Salesman Problem. 285-298 - Francisco Toja-Silva, Carlos Peralta, Oscar Lopez-Garcia

, Jorge Navarro, Ignacio Cruz
:
On Roof Geometry for Urban Wind Energy Exploitation in High-Rise Buildings. 299-325 - Paul J. Gendron:

Fast Computation of the Non-Central Chi Square PDF Outside the HDR Under a Requisite Precision Constraint. 326-335
Volume 3, Number 3, September 2015
- Indrakumar Vetharaniam, Martin Upsdell

, William J. Kelly, Graeme T. Attwood, Christina D. Moon
, Philip J. Harris
:
In Silico Comparison of the Hemicelluloses Xyloglucan and Glucuronoarabinoxylan in Protecting Cellulose from Degradation. 336-353 - Christian F. Janßen, Dennis Mierke

, Micha Überrück, Silke Gralher, Thomas Rung
:
Validation of the GPU-Accelerated CFD Solver ELBE for Free Surface Flow Problems in Civil and Environmental Engineering. 354-385 - Giancarlo Alfonsi:

Numerical Simulations of Wave-Induced Flow Fields around Large-Diameter Surface-Piercing Vertical Circular Cylinder. 386-426 - Richard L. Lamb, Joshua Premo:

Computational Modeling of Teaching and Learning through Application of Evolutionary Algorithms. 427-443 - Nils Koliha, Christian F. Janßen, Thomas Rung

:
Towards Online Visualization and Interactive Monitoring of Real-Time CFD Simulations on Commodity Hardware. 444-478 - Claudio Mannini:

Applicability of URANS and DES Simulations of Flow Past Rectangular Cylinders and Bridge Sections. 479-508
Volume 3, Number 4, December 2015
- Hassam Nasarullah Chaudhry

, John Kaiser Calautit
, Ben Richard Hughes, Lik Fang Sim:
CFD and Experimental Study on the Effect of Progressive Heating on Fluid Flow inside a Thermal Wind Tunnel. 509-527 - Wayne S. Kendal, Bent Jørgensen:

A Scale Invariant Distribution of the Prime Numbers. 528-540 - Qingdong Zeng

, Jun Yao
:
Numerical Simulation of Fluid-Solid Coupling in Fractured Porous Media with Discrete Fracture Model and Extended Finite Element Method. 541-557 - Hui Wang, Zhiguo Qu, Wen Zhang, Wen-Quan Tao:

Effective Thermal Conductivity of MOF-5 Powder under a Hydrogen Atmosphere. 558-573 - Nicholas Capel, Devang Bharania, Sergei Manzhos

:
A Comparative Density Functional Theory and Density Functional Tight Binding Study of Phases of Nitrogen Including a High Energy Density Material N8. 574-585 - Konstantinos Giannakis

, Christos Papalitsas
, Kalliopi Kastampolidou
, Alexandros Singh
, Theodore Andronikos
:
Dominant Strategies of Quantum Games on Quantum Periodic Automata. 586-599 - Artin Laleian, Albert J. Valocchi

, Charles J. Werth
:
An Incompressible, Depth-Averaged Lattice Boltzmann Method for Liquid Flow in Microfluidic Devices with Variable Aperture. 600-615 - Ala Aldin M. H. M. Darghouth, Mark E. Casida, Walid Taouali, Kamel Alimi

, Mathias P. Ljungberg
, Peter Koval
, Daniel Sánchez-Portal
, Dietrich Foerster
:
Assessment of Density-Functional Tight-Binding Ionization Potentials and Electron Affinities of Molecules of Interest for Organic Solar Cells Against First-Principles GW Calculations. 616-656 - Shu Xia Tao

, Anne M. M. G. Theulings, Violeta Prodanovic, John Smedley, Harry van der Graaf:
Optical Properties of Silicon-Rich Silicon Nitride (SixNyHz) from First Principles. 657-669 - Eric T. Chung, Yalchin Efendiev, Wing Tat Leung

, Jun Ren:
Multiscale Simulations for Coupled Flow and Transport Using the Generalized Multiscale Finite Element Method. 670-686 - Hongguang Sui, Jun Yao

, Lei Zhang:
Molecular Simulation of Shale Gas Adsorption and Diffusion in Clay Nanopores. 687-700 - Muhammad Faisal

, Andreas Futschik
, Claus Vogl:
Exact Likelihood Calculation under the Infinite Sites Model. 701-713

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