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ORCIDComputers in Biology and Medicine, Volume 158
Volume 158, May 2023
- Ivan Izonin
, Hakan Kutucu, Krishna Kant Singh:
Smart systems and data-driven services in healthcare. 106074
- Xiao-Yao Qiu, Hao Wu, Jiangyi Shao:
Corrigendum to "TALE-cmap: Protein function prediction based on a TALE-based architecture and the structure information from contact map" [Comput. Biol. Med. 149 (2022) 105938]. 106232
- Jian Li, Kongyu Liu, Yating Hu, Hongchen Zhang, Ali Asghar Heidari, Huiling Chen, Weijiang Zhang, Abeer D. Algarni, Hela Elmannai:
Eres-UNet++: Liver CT image segmentation based on high-efficiency channel attention and Res-UNet++. 106501 - Nan Mu, Zonghan Lyu, Mostafa Rezaeitaleshmahalleh, Xiaoming Zhang, Todd Rasmussen, Robert McBane, Jingfeng Jiang:
Automatic segmentation of abdominal aortic aneurysms from CT angiography using a context-aware cascaded U-Net. 106569 - Ning Xi, Linlin Jia, Yongyue Wei, Xi-An Li, Feng Chen:
Epi-DNNs: Epidemiological priors informed deep neural networks for modeling COVID-19 dynamics. 106693 - Lin Wang, Xiufen Ye, Lie Ju, Wanji He, Donghao Zhang, Xin Wang, Yelin Huang, Wei Feng, Kaimin Song, Zongyuan Ge:
Medical matting: Medical image segmentation with uncertainty from the matting perspective. 106714 - Sonain Jamil, Arunabha M. Roy:
An efficient and robust Phonocardiography (PCG)-based Valvular Heart Diseases (VHD) detection framework using Vision Transformer (ViT). 106734 - Yufei Wang, Junwen Fan, Yu Tong, Lei Wang, Lingya Wang, Cuiye Weng, Chuqiao Lai, Jingjing Song, Weixi Zhang:
Bioinformatics analysis of ferroptosis-related gene AKR1C3 as a potential biomarker of asthma and its identification in BEAS-2B cells. 106740 - Jinfeng Wang, ShuaiHui Huang, Zhiwen Wang, Dong Huang, Jing Qin, Hui Wang, Wenzhong Wang, Yong Liang:
A calibrated SVM based on weighted smooth GL1/2 for Alzheimer's disease prediction. 106752 - Phasit Charoenkwan, Pramote Chumnanpuen, Nalini Schaduangrat, Changmin Oh, Balachandran Manavalan, Watshara Shoombuatong:
PSRQSP: An effective approach for the interpretable prediction of quorum sensing peptide using propensity score representation learning. 106784 - Ruolin Gong, SiJie He, Tiantian Tian, Jian Chen, Yuewen Hao, Chen Qiao:
FRCNN-AA-CIF: An automatic detection model of colon polyps based on attention awareness and context information fusion. 106787 - Ke Men, Yihao Li, Xia Wang, Guangwei Zhang, Jingjing Hu, Yanyan Gao, Ashley Han, Wenbin Liu, Henry Han:
Estimate the incubation period of coronavirus 2019 (COVID-19). 106794 - Donghu Yu, Chen Chen, Le Sun, Shaojie Wu, Xiaoyu Tang, Liye Mei, Cheng Lei, Du Wang, Xinghuan Wang, Liang Cheng, Sheng Li:
KRT13-expressing epithelial cell population predicts better response to chemotherapy and immunotherapy in bladder cancer: Comprehensive evidences based on BCa database. 106795 - Aidi Zhao, Hong Su, Chongyang She, Xiao Huang, Hui Li, Huaiyu Qiu, Zhihong Jiang, Gao Huang:
Joint optic disc and cup segmentation based on elliptical-like morphological feature and spatial geometry constraint. 106796 - Abbas Khan, Shoaib Adil, Hafiza Ayesha Qudsia, Yasir Waheed, Fahad M. Alshabrmi, Dong-Qing Wei:
Structure-based design of promising natural products to inhibit thymidylate kinase from Monkeypox virus and validation using free energy calculations. 106797 - Chao Wang, Qiang Yang:
ScerePhoSite: An interpretable method for identifying fungal phosphorylation sites in proteins using sequence-based features. 106798 - Diogo R. Reis, Bruno César dos Santos, Lucas Bleicher, Luis E. Zárate, Cristiane Neri Nobre:
Prediction of enzymatic function with high efficiency and a reduced number of features using genetic algorithm. 106799 - XueFei Li, ShengLong Luo, Zheng Wang, Yuanyuan Miao, ManMan Zhu, XiaoBo Zheng, GuoXin Luo, FangJun Bao, ShiHao Chen, JunJie Wang:
Dynamic topography analysis of the cornea and its application to the diagnosis of keratoconus. 106800 - Shi Yan, Yao Si, Wenyang Zhou, Rui Cheng, Pingping Wang, Di Wang, Wencai Ding, Wanying Shi, Qinghua Jiang, Fan Yang, Lifen Yao:
Single-cell transcriptomics reveals the interaction between peripheral CD4+ CTLs and mesencephalic endothelial cells mediated by IFNG in Parkinson's disease. 106801 - Se-Ryong Kang, Woncheol Shin, Su Yang, Jo-Eun Kim, Kyung-Hoe Huh, Sam-Sun Lee, Min-Suk Heo, Won-Jin Yi:
Structure-preserving quality improvement of cone beam CT images using contrastive learning. 106803 - Saeed Rafieyan, Ebrahim Vasheghani-Farahani, Nafiseh Baheiraei, Hamidreza Keshavarz:
MLATE: Machine learning for predicting cell behavior on cardiac tissue engineering scaffolds. 106804 - Marcin Nowak, Eduardo Divo, Wojciech Adamczyk:
Multiscale model for blood flow after a bileaflet artificial aortic valve implantation. 106805 - Runshi Zhang, Junchen Wang, Chenghao Chen:
Automatic implant shape design for minimally invasive repair of pectus excavatum using deep learning and shape registration. 106806 - Jie Zhang, Pengfei Zhou, Yijia Zheng, Hongyan Wu:
Predicting influenza with pandemic-awareness via Dynamic Virtual Graph Significance Networks. 106807 - Xiangjun Wu, Pengli Gao, Peng Zhang, Yaxin Shang, Bingxi He, Liwen Zhang, Jingying Jiang, Hui Hui, Jie Tian:
Cross-domain knowledge transfer based parallel-cascaded multi-scale attention network for limited view reconstruction in projection magnetic particle imaging. 106809 - Ping Meng, Guohua Wang, Hongzhe Guo, Tao Jiang:
Identifying cancer driver genes using a two-stage random walk with restart on a gene interaction network. 106810 - Meike Gierig, Peter Wriggers, Michele Marino:
Arterial tissues and their inflammatory response to collagen damage: A continuum in silico model coupling nonlinear mechanics, molecular pathways, and cell behavior. 106811 - Meiling Cai, Lin Zhao, Guojie Hou, Yanan Zhang, Wei Wu, Liye Jia, Juanjuan Zhao, Long Wang, Yan Qiang:
FDTrans: Frequency Domain Transformer Model for predicting subtypes of lung cancer using multimodal data. 106812 - Guotong Li, Xiaoqiang Tang, Jianfeng Li, Mingjie Dong:
Error identification and compensation regarding the kinematic parameter of the MD-PEF for tibial deformity correction. 106813 - M. Saqib Nawaz, Philippe Fournier-Viger, Yulin He, Qin Zhang:
PSAC-PDB: Analysis and classification of protein structures. 106814 - Abdul Rahim Shihabuddin, K. Sabeena Beevi:
Multi CNN based automatic detection of mitotic nuclei in breast histopathological images. 106815 - JinLin Zheng, LiCheng Shao, Zheng Yan, XiaoFei Lai, Fang Duan:
Study subnetwork developing pattern of autism children by non-negative matrix factorization. 106816 - Seyed Ali Rakhshan, Mahdi Soltani Nejad, Marzie Zaj, Fatemeh Helen Ghane:
Global analysis and prediction scenario of infectious outbreaks by recurrent dynamic model and machine learning models: A case study on COVID-19. 106817 - Yuxuan Wu, Huiyan Jiang, Wenbo Pang:
MSRA-Net: Tumor segmentation network based on Multi-scale Residual Attention. 106818 - Lingling Du, Hanruo Liu, Lan Zhang, Yao Lu, Mengyao Li, Yang Hu, Yi Zhang:
Deep ensemble learning for accurate retinal vessel segmentation. 106829 - Aolei Yang, Wei Mao, Shi-Min Chang, Yi-Qun He, Lin-Li Li, Hai-Long Li, Fong Long, You-Hai Dong:
Computational evaluation of the axis-blade angle for measurements of implant positions in trochanteric hip fractures: A finite element analysis. 106830 - Xiaona Xie, Qianzi Liu, Xuehua Zhou, Rongtao Liang, Shengbo Yang, Min Xu, Haiyang Zhao, Chengye Li, Yanfan Chen, Xueding Cai:
Comprehensive analysis of cuproptosis-related genes in immune infiltration and prognosis in lung adenocarcinoma. 106831 - Huanlei Wang, As'ad Alizadeh, Azher M. Abed, Anahita Piranfar, Ghassan Fadhil Smaisim, Hamad Karem Hadrawi, Hussein Zekri, Davood Toghraie, Maboud Hekmatifar:
Investigation of the effects of porosity and volume fraction on the atomic behavior of cancer cells and microvascular cells of 3DN5 and 5OTF macromolecular structures during hematogenous metastasis using the molecular dynamics method. 106832 - Jinyi Qian, Yuzhou Wang, Xiner Liu, Zijian Hu, Nan Xu, Yuetong Wang, Tianqiong Shi, Chao Ye:
Improving acetoin production through construction of a genome-scale metabolic model. 106833 - Zhixun Li, Nan Zhang, Huiling Gong, Ruiyun Qiu, Wei Zhang:
MFA-Net: Multiple Feature Association Network for medical image segmentation. 106834
- Sara Sardari, Sara Sharifzadeh, Alireza Daneshkhah, Bahareh Nakisa, Seng W. Loke, Vasile Palade, Michael Duncan:
Artificial Intelligence for skeleton-based physical rehabilitation action evaluation: A systematic review. 106835
- Kai Kang, Yijun Wu, Chang Han, Li Wang, Zhile Wang, Ailin Zhao:
Homologous recombination deficiency in triple-negative breast cancer: Multi-scale transcriptomics reveals distinct tumor microenvironments and limitations in predicting immunotherapy response. 106836 - Amirmohammad Shamaei, Jana Starcuková, Zenon Starcuk:
Physics-informed deep learning approach to quantification of human brain metabolites from magnetic resonance spectroscopy data. 106837 - Linfeng Jiang, Jiajie Ou, Ruihua Liu, Yangyang Zou, Ting Xie, Hanguang Xiao, Ting Bai:
RMAU-Net: Residual Multi-Scale Attention U-Net For liver and tumor segmentation in CT images. 106838 - Fahime Khozeimeh, Roohallah Alizadehsani, Milad Shirani, Mehrzad Tartibi, Afshin Shoeibi, Hamid Alinejad-Rokny, Chandrashekhar Harlapur, Sayed Javed Sultanzadeh, Abbas Khosravi, Saeid Nahavandi, Ru San Tan, U. Rajendra Acharya:
ALEC: Active learning with ensemble of classifiers for clinical diagnosis of coronary artery disease. 106841 - Yan Zheng, Xuequn Shang, Wing-Kin Sung:
SVsearcher: A more accurate structural variation detection method in long read data. 106843 - Hua Deng, Meng Ding, Yimeng Wang, Weihua Li, Guixia Liu, Yun Tang:
ACP-MLC: A two-level prediction engine for identification of anticancer peptides and multi-label classification of their functional types. 106844 - Anne M. Fischer, Alex Rietveld, Peter Teunissen, P. C. A. M. Bakker, Mark Hoogendoorn:
End-to-end learning with interpretation on electrohysterography data to predict preterm birth. 106846
- Nazish Khalid, Adnan Qayyum, Muhammad Bilal, Ala I. Al-Fuqaha, Junaid Qadir:
Privacy-preserving artificial intelligence in healthcare: Techniques and applications. 106848
- Xiaofeng Liang, Xiaobing Lin, Zien Lin, Weiyi Lin, Zhishen Peng, Shanshan Wei:
Genes associated with cellular senescence favor melanoma prognosis by stimulating immune responses in tumor microenvironment. 106850 - Ludovico Pipitò, Thomas Arron Illingworth, Giuseppe Deganutti:
Targeting hPKM2 in cancer: A bio isosteric approach for ligand design. 106852 - Nasimeh Marvi, Javad Haddadnia, Mohammad Reza Fayyazi Bordbar:
An automated drug dependence detection system based on EEG. 106853 - Shyam Marjit, Trinav Bhattacharyya, Bitanu Chatterjee, Ram Sarkar:
Simulated annealing aided genetic algorithm for gene selection from microarray data. 106854 - Md. Asad Ullah, Sayka Alam, Abu Tayab Moin, Tanvir Ahamed, Abdullah Mohammad Shohael:
Risk factors and actionable molecular signatures in COVID-19-associated lung adenocarcinoma and lung squamous cell carcinoma patients. 106855 - Syed Jawad Hussain Shah, Ahmed Awad Albishri, Seung Suk Kang, Yugyung Lee, Scott R. Sponheim, Miseon Shim:
ETSNet: A deep neural network for EEG-based temporal-spatial pattern recognition in psychiatric disorder and emotional distress classification. 106857 - Wei Peng, Tielin Chen, Hancheng Liu, Wei Dai, Ning Yu, Wei Lan:
Improving drug response prediction based on two-space graph convolution. 106859 - Yongting Liu, Jiayao Ma, Xinwen Wang, Ping Liu, Changjing Cai, Ying Han, Shan Zeng, Ziyang Feng, Hong Shen:
Lipophagy-related gene RAB7A is involved in immune regulation and malignant progression in hepatocellular carcinoma. 106862 - Abhishek Kumar Verma, Saumya Dubey, Sandeep Kumar Srivastava:
"Identification of alkaloid compounds as potent inhibitors of Mycobacterium tuberculosis NadD using computational strategies". 106863 - Naorem Leimarembi Devi, Neelam Sharma, Gajendra P. S. Raghava:
A web server for predicting and scanning of IL-5 inducing peptides using alignment-free and alignment-based method. 106864 - Shahid Ahmad Wani, Sumeer Ahmad Khan, S. M. K. Quadri:
scJVAE: A novel method for integrative analysis of multimodal single-cell data. 106865 - Lejun Gong, Dagui Gao, Xingxing Zhang, Shiqi Chen, Jiaqi Qian:
REL-NPMI: Exploring genotype and phenotype relationship of pancreatitis based on improved normalized point-by-point mutual information. 106868 - Riasat Azim, Shulin Wang, Shoaib Ahmed Dipu, Nazmin Islam, Munshi Rezwan Ala Muid, Md. Fazla Elahe, Mei Li:
A patient-specific functional module and path identification technique from RNA-seq data. 106871 - Chengbin Guo, Yuqin Tang, Qizhuo Li, Zhao Yang, Yuqi Guo, Chuanliang Chen, Yongqiang Zhang:
Deciphering the immune heterogeneity dominated by natural killer cells with prognostic and therapeutic implications in hepatocellular carcinoma. 106872 - Meilin Liu, Zidong Wang, Han Li, Peishu Wu, Fuad E. Alsaadi, Nianyin Zeng:
AA-WGAN: Attention augmented Wasserstein generative adversarial network with application to fundus retinal vessel segmentation. 106874 - Qingpei Lai, Xiang Liu, Fan Yang, Jie Li, Yaoqin Xie, Wenjian Qin:
Constructing metabolism-protein interaction relationship to identify glioma prognosis using deep learning. 106875 - Rosario Catelli, Serena Pelosi, Carmela Comito, Clara Pizzuti, Massimo Esposito:
Lexicon-based sentiment analysis to detect opinions and attitude towards COVID-19 vaccines on Twitter in Italy. 106876 - Guang Li, Ren Togo, Takahiro Ogawa, Miki Haseyama:
Boosting automatic COVID-19 detection performance with self-supervised learning and batch knowledge ensembling. 106877 - Rui Wang, Yun Gu, Tianyi Zhang, Jie Yang:
Fast cancer metastasis location based on dual magnification hard example mining network in whole-slide images. 106880 - Gwangmin Kim, Doheon Lee:
Reverse tracking from drug-induced transcriptomes through multilayer molecular networks reveals hidden drug targets. 106881 - Yixi Xu, Ivan S. Klyuzhin, Sara Harsini, Anthony Ortiz, Shun Zhang, François Bénard, Rahul Dodhia, Carlos F. Uribe, Arman Rahmim, Juan Lavista Ferres:
Automatic segmentation of prostate cancer metastases in PSMA PET/CT images using deep neural networks with weighted batch-wise dice loss. 106882 - Shuai Jiang, Arief A. Suriawinata, Saeed Hassanpour:
MHAttnSurv: Multi-head attention for survival prediction using whole-slide pathology images. 106883 - Yunyuan Gao, Congrui Zhang, Feng Fang, Jared Cammon, Yingchun Zhang:
Multi-domain feature analysis method of MI-EEG signal based on Sparse Regularity Tensor-Train decomposition. 106887
- Xiufeng Zhang, Yansong Liu, Shengjin Guo, Zhao Song:
EG-Unet: Edge-Guided cascaded networks for automated frontal brain segmentation in MR images. 106891
- Cheng Chen, Kangneng Zhou, Siyu Qi, Tong Lu, Ruoxiu Xiao:
A learnable Gabor Convolution kernel for vessel segmentation. 106892 - Tiaozhan Zheng, Hanxi Zhou, Zhiwen Zheng, Yiqing Guo, Junfei Liu, Jingmin Zhang, Shikang Li:
The pathological significance and potential mechanism of ARHGEF6 in lung adenocarcinoma. 106894 - Lijuan Lv, Xiangpei Wang, Hongmei Wu:
Assessment of palmitic acid toxicity to animal hearts and other major organs based on acute toxicity, network pharmacology, and molecular docking. 106899
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