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ORCIDBMC Genomics, Volume 20 - Supplements
Volume 20, Number S-2, April 2019
- Ko Abe, Masaaki Hirayama
, Kinji Ohno, Teppei Shimamura:
ENIGMA: an enterotype-like unigram mixture model for microbial association analysis. - Wenhao Qian, Ting Ma, Mao Ye, Zhiyao Li, Yuanhua Liu, Pei Hao:
Microbiota in the apical root canal system of tooth with apical periodontitis. - Bipasa Biswas, Yinglei Lai:
A distance-type measure approach to the analysis of copy number variation in DNA sequencing data. - Aldo Guzmán-Sáenz, Niina Haiminen, Saugata Basu, Laxmi Parida:
Signal enrichment with strain-level resolution in metagenomes using topological data analysis. - Kui Hua, Xuegong Zhang:
Estimating the total genome length of a metagenomic sample using k-mers. - Xia Zhang, Yanglan Gan, Guobing Zou, Jihong Guan, Shuigeng Zhou:
Genome-wide analysis of epigenetic dynamics across human developmental stages and tissues. - Yanlin Zhang, Weiwei Liu, Yu Lin, Yen Kaow Ng, Shuaicheng Li:
Large-scale 3D chromatin reconstruction from chromosomal contacts. - Dongmei Ai, Xiaoxin Li, Hongfei Pan, Jiamin Chen, Jacob A. Cram, Li C. Xia:
Explore mediated co-varying dynamics in microbial community using integrated local similarity and liquid association analysis. - Pengshuo Yang, Shaojun Yu, Lin Cheng, Kang Ning:
Meta-network: optimized species-species network analysis for microbial communities. - Sungjoon Park, Minsu Kim, Seokjun Seo, Seungwan Hong, Kyoohyung Han, Keewoo Lee, Jung Hee Cheon, Sun Kim:
A secure SNP panel scheme using homomorphically encrypted K-mers without SNP calling on the user side. - Shaokun An, Liang Ma, Lin Wan:
TSEE: an elastic embedding method to visualize the dynamic gene expression patterns of time series single-cell RNA sequencing data. - Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars:
GPU accelerated sequence alignment with traceback for GATK HaplotypeCaller. - Qijin Yin, Mengmeng Wu, Qiao Liu, Hairong Lv, Rui Jiang:
DeepHistone: a deep learning approach to predicting histone modifications. - Qi Tian, Jianxiao Zou, Jianxiong Tang, Yuan Fang, Zhongli Yu, Shicai Fan:
MRCNN: a deep learning model for regression of genome-wide DNA methylation. - Nan Du, Jiao Chen, Yanni Sun:
Improving the sensitivity of long read overlap detection using grouped short k-mer matches.
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