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Semantic ScholarComputer Applications in the Biosciences, Volume 6
Volume 6, Number 1, January 1990
A. Gabrielian, V. S. Ivanov, A. T. Kozhich:
On searching for the active sites in proteins and peptide hormones. 1-2B. Henrissat, E. Raimbaud, V. Tran, J. P. Mornon:
HCABAND: a computer program for the 2D-helical representation of protein sequences. 3-5Jih-Hsiang Chen, Shu-Yun Le, Bruce A. Shapiro, Kathleen M. Currey, Jacob V. Maizel:
A computational procedure for assessing the significance of RNA secondary structure. 7-18J. Gomel:
A fast algorithm for evaluating an approximation to the information enclosed within coronas and their sectors in square matrices. 19-21Hermann-Georg Holzhütter, Alfredo Colosimo:
SIMFIT: a microcomputer software-toolkit for modelistic studies in biochemistry. 23-28M. L. Sparling:
Analysis of mixed lipid extracts using 1H NMR spectra. 29-42G. M. Suboch, Yu. A. Sprizhitsky:
Statistical significance of some complex nucleotide combinations: a comparison of DNA models. 43-48P. Wozniak, Wojciech Makalowski:
Searching for tRNA genes in DNA sequences--an IBM microcomputer program. 49-50R. Myers, S. Olson, S. Maloy:
Computer programs for the rapid determination of enzyme kinetics on MS- DOS compatible microcomputers. 51-53K. P. Fung, James Lee:
Basic program to assess the extent and pattern of agreement between two procedures. 54M. D. Atkinson, J. S. Heslop-Harrison:
A simple method of hidden-line removal in three-dimensional modelling: hiding the problem behind filled polygons. 55-56
Volume 6, Number 2, April 1990
R. Myers, S. Olsen, S. Maloy:
Computer programs for the rapid determination of enzyme kinetics on MS- DOS compatible microcomputers. 63-65P. R. Hunter:
A character separation index suitable for binary data containing equivocal responses. 67-69Alain Viari, Henry Soldano, E. Ollivier:
A scale-independent signal processing method for sequence analysis. 71-80G. Z. Hertz, G. W. Hartzell III, Gary D. Stormo:
Identification of consensus patterns in unaligned DNA sequences known to be functionally related. 81-92J. M. Smith, D. J. Thomas:
Quantitative analysis of one-dimensional gel electrophoresis profiles. 93-99L. Menendez-Arias, R. Rodríguez:
A BASIC microcomputer program for prediction of B and T cell epitopes in proteins. 101-105A. V. Grigorjev, Andrey A. Mironov:
Mapping DNA by stochastic relaxation: a new approach to fragment sizes. 107-111D. G. Gilbert:
Two Hypercard calculators for molecular biology. 113-116D. G. Gilbert:
Dot plot sequence comparisons on Macintosh computers. 117Neil D. Rawlings, Alan J. Barrett:
FLUSYS: a software package for the collection and analysis of kinetic and scanning data from Perkin-Elmer fluorimeters. 118-119Rainer Fuchs:
Free molecular biological software available from the EMBL file server. 120-121G. W. Williams, G. P. Gibbs:
Automatic updating of the EMBL database via EMBNet. 122-123C. G. Bridges:
Olga--oligonucleotide primer design program for the Atari ST. 124-125J. H. Correia:
Management of personal bibliographic reference using a simple database program. 126-127Pasquale Petrilli, Carlo Caporale, Ciro Sepe:
PROLANG: an expandable software in protein chemistry. 128-130
Volume 6, Number 3, July 1990
M. F. Petrini, T. M. Dwyer, M. A. Wall, J. K. Mansel, J. R. Norman:
Communication between the PC and laboratory instruments. 161-164I. E. Auger, C. E. Lawrence:
Identification of the most significant amphipathic helix with application to HIV and MHV envelope proteins. 165-171T. H. Fischer, G. C. White II:
The development of a high-order Taylor expansion solution to the chemical rate equation for the simulation of complex biochemical systems. 173-177R. O. Stephen, P. M. Shelton, M. S. Bradshaw:
Generating precise mechanical stimuli and recording chordotonal organ discharge patterns using a microcomputer. 179-188Jeffrey I. Mechanick, Charles S. Peskin:
A C version of Fourier-derived affinity spectrum analysis (FASA) to resolve binding heterogeneity. 189-194S. T. Ho, Lloyd Allison, Chut N. Yee:
Restriction site mapping for three or more enzymes. 195-204K. Y. Jiang, J. Zheng, S. B. Higgins, D. M. Watterson, T. A. Craig, T. J. Lukas, L. J. Van Eldik:
A knowledge-based experimental design system for nucleic acid engineering. 205-212Marc Eberhard:
A set of programs for analysis of kinetic and equilibrium data. 213-221F. Blanca, C. Ferraz, J. Sri Widada, J. P. Liautard:
Quantitative analysis of the selective pressure exerted on homologous proteins. 223-228Alberto Diaspro, P. Scelza, Claudio Nicolini:
MUCIDS: an operative C environment for acquisition and processing of polarized-light scattered from biological specimens. 229-236Douglas L. Brutlag, Jean-Pierre Dautricourt, S. Maulik, J. Relph:
Improved sensitivity of biological sequence database searches. 237-245Webb Miller, James Ostell, Kenneth E. Rudd:
An algorithm for searching restriction maps. 247-252A. H. Reisner, Carolyn A. Bucholtz, G. A. Bell, K. Tsui, D. Rosenfeld, Gabor T. Herman:
Two- and three-dimensional image reconstructions from stained and autoradiographed histological sections. 253-261Chris A. Fields, C. A. Soderlund:
gm: a practical tool for automating DNA sequence analysis. 263-270Pier Luigi Bellon, Salvatore Lanzavecchia:
POLCA, a library running in a modern environment, implements a protocol for averaging randomly oriented images. 271-277Peter R. Sibbald, P. Argos:
Scrutineer: a computer program that flexibly seeks and describes motifs and profiles in protein sequence databases [published erratum appears in Comput Appl Biosci 1990 Oct;6(4): 431]. 279-288B. Rossaro:
Some programs useful for managing data in ecology, taxonomy and zoogeography. 289-290Joachim Mandler, Stephan Ludwig:
SUBSIS: DNASIS/PROSIS subdirectory management. 291-292R. F. Mott, T. B. Kirkwood:
STATSEARCH: a GCG-compatible program for assessing statistical significance during DNA and protein databank searches. 293-295
Volume 6, Number 4, October 1990
Bruce A. Shapiro, Kaizhong Zhang:
Comparing multiple RNA secondary structures using tree comparisons. 309-318Yoshua Bengio, Yannick Pouliot:
Efficient recognition of immunoglobulin domains from amino acid sequences using a neural network. 319-324Daniel Gautheret, François Major, Robert Cedergren:
Pattern searching/alignment with RNA primary and secondary structures: an effective descriptor for tRNA. 325-331Krzysztof J. Cios, R. E. Freasier, Lucy S. Goodenday, L. T. Andrews:
An expert system for diagnosis of coronary artery stenosis based on 201Tl scintigrams using the Dempster-Shafer theory of evidence. 333-342Mark Dubnick, David W. Mount:
SPLICE, a computer program for automated extraction of information from GenBank sequence entries. 343-346Jürgen Kleffe, Uwe Langbecker:
Exact computation of pattern probabilities in random sequences generated by Markov chains. 347-35Philippe Dessen, C. Fondrat, C. Valencien, C. Mugnier:
BISANCE: a French service for access to biomolecular sequence databases. 355-356Graham J. L. Kemp, Peter M. D. Gray:
Finding hydrophobic microdomains using an object-oriented database. 357-363Steve Winker, Ross A. Overbeek, Carl R. Woese, Gary J. Olsen, N. Pfluger:
Structure detection through automated covariance search. 365-371Xiaoqiu Huang, Ross C. Hardison, Webb Miller:
A space-efficient algorithm for local similarities. 373-381N. Gautier, A. Pave:
Object-centered representation for species systematics and identification in living systems in nature. 383-386Rodger Staden:
An improved sequence handling package that runs on the Apple Macintosh. 387-393P. L. Mauri, M. Bitonti, M. Pace, P. G. Pietta, D. Agnellini:
Automatic computation of enzyme kinetics by HPLC. 395-398W. Bains:
A program to optimize DNA sequences for protein expression. 399-400
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