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ORCID10. HealthGrid 2012: Amsterdam, The Netherlands
- Sandra Gesing, Tristan Glatard, Jens Krüger, Sílvia Delgado Olabarriaga, Tony Solomonides, Jonathan C. Silverstein, Johan Montagnat, Alban Gaignard, Dagmar Krefting:
HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012. Studies in Health Technology and Informatics 175, IOS Press 2012, ISBN 978-1-61499-053-6
Part I. HealthGrid Applications and Technologies
- Tristan Glatard, Sílvia D. Olabarriaga, Tony Solomonides:
HealthGrid 2012. 3-6
Section 1. HealthGrid Scientific Papers
- Ronald C. Price, Derick Huth, Jody Smith, Steve Harper, Wilson Pace, Gerald Pulver, Michael G. Kahn, Lisa M. Schilling, Julio C. Facelli
:
Federated Queries for Comparative Effectiveness Research: Performance Analysis. 9-18 - Ann L. Chervenak, Theo G. M. van Erp, Carl Kesselman, Mike D'Arcy, Janet Sobell, David B. Keator, Lisa Dahm, Jim Murry, Meng Law, Anton N. Hasso, Joseph Ames, Fabio Macciardi, Steven G. Potkin:
A System Architecture for Sharing De-Identified, Research-Ready Brain Scans and Health Information Across Clinical Imaging Centers. 19-28 - Robert Schuler, David E. Smith, Gowri Kumaraguruparan, Ann L. Chervenak, Anne D. Lewis, Dallas M. Hyde, Carl Kesselman:
A Flexible, Open, Decentralized System for Digital Pathology Networks. 29-38 - John D. Ainsworth, James A. Cunningham, Iain E. Buchan:
eLab: Bringing Together People, Data and Methods to Enhance Knowledge Discovery in Healthcare Settings. 39-48 - Evert Mouw, Guido van 't Noordende, Antoine H. C. van Kampen, Baas Louter, Mark Santcroos, Sílvia D. Olabarriaga:
Legal constraints on genetic data processing in European grids. 49-58 - Sébastien Moretti, Riccardo Murri, Sergio Maffioletti, Arnold Kuzniar, Briséïs Castella, Nicolas Salamin, Marc Robinson-Rechavi, Heinz Stockinger:
gcodeml: A Grid-enabled Tool for Detecting Positive Selection in Biological Evolution. 59-68 - Abel Carrión, Ignacio Blanquer, Vicente Hernández:
A Service-based BLAST command tool supported by Cloud Infrastructures. 69-77
Section 2. Life Sciences Grid Community (LSGC) Papers
- Franck Michel, Johan Montagnat, Tristan Glatard:
Technical support for Life Sciences communities on a production grid infrastructure. 81-90 - Souley Madougou, Mark Santcroos, Ammar Benabdelkader, Barbera D. C. van Schaik, Shayan Shahand, Vladimir Korkhov, Antoine H. C. van Kampen, Sílvia D. Olabarriaga:
Provenance for distributed biomedical workflow execution. 91-100
Section 3. Tutorials
- Tom Visser:
Tutorial on academic high-performance cloud computing. 103 - Jie Wu, René Siewert, Dagmar Krefting:
Hands-On Tutorial on Grid Portal development focused on Biomedical Image and Signal Processing. 104
Section 4. Demonstrations
- Jie Wu, René Siewert, Svenja Specovius, Benjamin Löhnhardt, Romanus Grütz, Frank Dickmann, Alexander Ulrich Brandt, Michael Scheel, David Oswald, Dagmar Krefting:
Web-based Interactive Visualization of Grid-enabled Neuroimaging Applications. 107 - Fulvio Galeazzi, Federica Tanlongo, Valeria Ardizzone:
DECIDE: a user friendly web-based service for early diagnosis and research on Alzheimer's disease. 108 - Vladimir Korkhov, Dagmar Krefting, Johan Montagnat, Tram Truong Huu, Tamas Kukla, Gábor Terstyánszky, David Manset, Matthan W. A. Caan, Sílvia D. Olabarriaga:
SHIWA workflow interoperability solutions for neuroimaging data analysis. 109-110 - Livia Torterolo, Francesco Ruffino:
Desktop Cloud Visualization: the new technology to remote access 3D interactive applications in the Cloud. 111-112
Part II. Science Gateways for Life Sciences
- Sandra Gesing, Jens Krüger:
Workshop Series IWSG-Life. 115-118 - Valeria Ardizzone, Riccardo Bruno, Antonio Calanducci, Carla Carrubba, Marco Fargetta, Elisa Ingrà, Giuseppina Inserra, Giuseppe La Rocca, Salvatore Monforte, Fabrizio Pistagna, Rita Ricceri, Riccardo Rotondo, Diego Scardaci, Roberto Barbera:
Science Gateways for Semantic-Web-Based Life Science Applications. 119-130 - Konstantinos Karasavvas, Katy Wolstencroft, Eleni Mina, Don Cruickshank, Alan R. Williams, David De Roure, Carole A. Goble, Marco Roos:
Opening new gateways to workflows for life scientists. 131-141 - Sonja Herres-Pawlis, Georg Birkenheuer, André Brinkmann, Sandra Gesing, Richard Grunzke, René Jäkel, Oliver Kohlbacher, Jens Krüger, Ines dos Santos Vieira:
Workflow-enhanced conformational analysis of guanidine zinc complexes via a science gateway. 142-151 - Gábor Terstyánszky, Tamás Kiss, Tamas Kukla, Zsolt Lichtenberger, Stephen C. Winter, Pamela Greenwell, Sharron McEldowney, Hans Heindl:
Application Repository and Science Gateway for Running Molecular Docking and Dynamics Simulations. 152-161 - Olaf Schneider, Rasmus H. Fogh, Ulrich Sternberg, Konstantin V. Klenin, Ivan Kondov:
Structure Simulation with Calculated NMR Parameters - Integrating COSMOS into the CCPN Framework. 162-172 - René Siewert, Svenja Specovius, Jie Wu, Dagmar Krefting:
Web-based Interactive Visualization in a Grid-enabled Neuroimaging Application Using HTML5. 173-181 - Aaron Golden, Andrew S. McLellan, Robert A. Dubin, Qiang Jing, Pilib Ó Broin, David Moskowitz, Zhengdong Zhang, Masako Suzuki, Joseph Hargitai, R. Brent Calder, John M. Greally:
The Einstein Genome Gateway using WASP - A High Throughput Multi-Layered Life Sciences Portal for XSEDE. 182-191
Part III. Science Gateways for Biomedical Research
- Shayan Shahand, Matthan W. A. Caan, Antoine H. C. van Kampen, Sílvia D. Olabarriaga:
Integrated Support for Neuroscience Research: from Study Design to Publication. 195-204 - Vincent Rouilly, Eva Pujadas, Béla Hullár, Csaba Balázs, Peter Z. Kunszt, Michael Podvinec:
iBRAIN2: Automated analysis and data handling for RNAi screens. 205-213
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