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ORCIDYu Xia 0002
Person information
- affiliation: McGill University, Department of Bioengineering, Montreal, QC, Canada
- affiliation (2006 - 2013): Boston University, Bioinformatics Program, MA, USA
- affiliation (2003 - 2006): Yale University, Department of Molecular Biophysics and Biochemistry, New Haven, CT, USA
- affiliation (PhD 2003): Stanford University, Department of Chemistry, CA, USA
Other persons with the same name
- Yu Xia — disambiguation page
- Yu Xia 0001 — Sichuan Normal University, College of Computer Science, China (and 3 more)
- Yu Xia 0003 — McMaster University, Hamilton, Canada
- Yu Xia 0004 — Northeastern University, D'Amore-McKim School of Business, Boston, MA, USA
- Yu Xia 0005
![[0009-0009-3130-5046]](https://dblp.uni-trier.de/img/orcid-mark.12x12.png "0009-0009-3130-5046")
— University of Edinburgh, UK (and 1 more) - Yu Xia 0006 — Hangzhou Normal University, Zhejiang, China (and 1 more)
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Journal Articles
- 2022
[j12]Mohamed A. Ghadie, Yu Xia:
Are transient protein-protein interactions more dispensable? PLoS Comput. Biol. 18(4) (2022)- 2021
- [j11]Mohamed Ghadie, Yu Xia:
Mutation Edgotype Drives Fitness Effect in Human. Frontiers Bioinform. 1 (2021) - 2020
- [j10]Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoît Charloteaux, Dong-Sic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon-gang Choi, Claudia Colabella, Georges Coppin, Cassandra D'Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Tasan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood:
A reference map of the human binary protein interactome. Nat. 580(7803): 402-408 (2020) - 2019
- [j9]Yangchun Frank Chen, Yu Xia:
Convergent perturbation of the human domain-resolved interactome by viruses and mutations inducing similar disease phenotypes. PLoS Comput. Biol. 15(2) (2019) - 2017
- [j8]Mohamed A. Ghadie, Luke Lambourne, Marc Vidal, Yu Xia:
Domain-based prediction of the human isoform interactome provides insights into the functional impact of alternative splicing. PLoS Comput. Biol. 13(8) (2017) - 2012
- [j7]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Active Clustering of Biological Sequences. J. Mach. Learn. Res. 13: 203-225 (2012) - [j6]Jasmin Coulombe-Huntington, Yu Xia:
Regulatory Network Structure as a Dominant Determinant of Transcription Factor Evolutionary Rate. PLoS Comput. Biol. 8(10) (2012) - 2010
- [j5]Jignesh R. Parikh, Bertram Klinger, Yu Xia, Jarrod A. Marto, Nils Blüthgen:
Discovering causal signaling pathways through gene-expression patterns. Nucleic Acids Res. 38(Web-Server-Issue): 109-117 (2010) - 2009
- [j4]Konstantin Voevodski, Shang-Hua Teng, Yu Xia:
Finding local communities in protein networks. BMC Bioinform. 10: 297 (2009) - [j3]Konstantin Voevodski, Shang-Hua Teng, Yu Xia:
Spectral affinity in protein networks. BMC Syst. Biol. 3: 112 (2009) - [j2]Yu Xia, Eric A. Franzosa, Mark B. Gerstein:
Integrated Assessment of Genomic Correlates of Protein Evolutionary Rate. PLoS Comput. Biol. 5(6) (2009) - 2008
- [j1]Bolan Linghu, Evan S. Snitkin, Dustin T. Holloway, Adam M. Gustafson, Yu Xia, Charles DeLisi:
High-precision high-coverage functional inference from integrated data sources. BMC Bioinform. 9 (2008)
Conference and Workshop Papers
- 2012
- [c4]Eric A. Franzosa, Yu Xia:
Structural Models for Host-Pathogen Protein-Protein Interactions: Assessing Coverage and Bias. Pacific Symposium on Biocomputing 2012: 287-298 - 2011
- [c3]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Min-sum Clustering of Protein Sequences with Limited Distance Information. SIMBAD 2011: 192-206 - 2010
- [c2]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Efficient Clustering with Limited Distance Information. UAI 2010: 632-640 - 1999
- [c1]Ram Samudrala, Yu Xia, M. Levitt, Enoch S. Huang:
A Combined Approach for Ab Initio Construction of Low Resolution Protein Tertiary Structures from Sequence. Pacific Symposium on Biocomputing 1999: 505-516
Parts in Books or Collections
- 2011
- [p2]Bolan Linghu, Guohui Liu, Yu Xia:
Using Functional Linkage Gene Networks to Study Human Diseases. Handbook of Research on Computational and Systems Biology 2011: 275-293 - 2005
- [p1]Long J. Lu, Yu Xia, Haiyuan Yu, Alexander Rives, Haoxin Lu, Falk Schubert, Mark Gerstein:
Protein Interaction Prediction by Integrating Genomic Features and Protein Interaction Network Analysis. Data Analysis and Visualization in Genomics and Proteomics 2005: 61-81
Informal and Other Publications
- 2014
- [i3]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Efficient Clustering with Limited Distance Information. CoRR abs/1408.2045 (2014) - 2011
- [i2]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Clustering Protein Sequences Given the Approximation Stability of the Min-Sum Objective Function. CoRR abs/1101.3620 (2011) - 2010
- [i1]Konstantin Voevodski, Maria-Florina Balcan, Heiko Röglin, Shang-Hua Teng, Yu Xia:
Efficient Clustering with Limited Distance Information. CoRR abs/1009.5168 (2010)
Coauthor Index
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