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Zhi-Zhong Chen
- > Home > Persons > Zhi-Zhong Chen
Publications
- 2022
- [j83]Zhi-Zhong Chen, Fei Deng, Lusheng Wang:
Identifying duplications and lateral gene transfers simultaneously and rapidly. J. Bioinform. Comput. Biol. 20(1): 2150033:1-2150033:26 (2022) - 2021
- [j80]Yong Chen, Zhi-Zhong Chen, Guohui Lin, Lusheng Wang, An Zhang:
A randomized approximation algorithm for metric triangle packing. J. Comb. Optim. 41(1): 12-27 (2021) - 2020
- [j78]Zhi-Zhong Chen, Shohei Ueta, Jingyu Li, Lusheng Wang:
Computing a Consensus Phylogeny via Leaf Removal. J. Comput. Biol. 27(2): 175-188 (2020) - [j77]Kohei Yamada, Zhi-Zhong Chen, Lusheng Wang:
Improved Practical Algorithms for Rooted Subtree Prune and Regraft (rSPR) Distance and Hybridization Number. J. Comput. Biol. 27(9): 1422-1432 (2020) - [j76]Zhi-Zhong Chen, Youta Harada, Yuna Nakamura, Lusheng Wang:
Faster Exact Computation of rSPR Distance via Better Approximation. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 916-929 (2020) - 2019
- [j75]Zhi-Zhong Chen, Guohui Lin, Lusheng Wang, Yong Chen, Dan Wang:
Approximation Algorithms for the Maximum Weight Internal Spanning Tree Problem. Algorithmica 81(11-12): 4167-4199 (2019) - [j74]Shota Yuasa, Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
Designing and implementing algorithms for the closest string problem. Theor. Comput. Sci. 786: 32-43 (2019) - [c53]Yong Chen, Zhi-Zhong Chen, Guohui Lin, Lusheng Wang, An Zhang:
A Randomized Approximation Algorithm for Metric Triangle Packing. COCOA 2019: 119-129 - [c51]Zhi-Zhong Chen, Shohei Ueta, Jingyu Li, Lusheng Wang:
Computing a Consensus Phylogeny via Leaf Removal. ISBRA 2019: 3-15 - [c50]Kohei Yamada, Zhi-Zhong Chen, Lusheng Wang:
Better Practical Algorithms for rSPR Distance and Hybridization Number. WABI 2019: 5:1-5:12 - 2018
- [j73]Maryam Etemadi, Mehri Bagherian, Zhi-Zhong Chen, Lusheng Wang:
Better ILP models for haplotype assembly. BMC Bioinform. 19-S(1): 11-21 (2018) - [j72]Zhi-Zhong Chen, Youta Harada, Fei Guo, Lusheng Wang:
An approximation algorithm for maximum internal spanning tree. J. Comb. Optim. 35(3): 955-979 (2018) - [j71]Zhi-Zhong Chen, Qilong Feng, Chao Shen, Jianxin Wang, Lusheng Wang:
Algorithms for Pedigree Comparison. IEEE ACM Trans. Comput. Biol. Bioinform. 15(2): 422-431 (2018) - [j70]Zhi-Zhong Chen, Youta Harada, Fei Guo, Lusheng Wang:
Approximation algorithms for the scaffolding problem and its generalizations. Theor. Comput. Sci. 734: 131-141 (2018) - [c49]Zhi-Zhong Chen, Shohei Ueta, Jingyu Li, Lusheng Wang:
Finding a Center Tree of Phylogenetic Trees via Leaf Removal. BIBM 2018: 61-64 - 2017
- [c48]Zhi-Zhong Chen, Guohui Lin, Lusheng Wang, Yong Chen, Dan Wang:
Approximation Algorithms for the Maximum Weight Internal Spanning Tree Problem. COCOON 2017: 124-136 - [c47]Shota Yuasa, Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
Designing and Implementing Algorithms for the Closest String Problem. FAW 2017: 79-90 - [c46]Zhi-Zhong Chen, Youta Harada, Lusheng Wang:
A New 2-Approximation Algorithm for rSPR Distance. ISBRA 2017: 128-139 - [c45]Zhi-Zhong Chen, Youta Harada, Fei Guo, Lusheng Wang:
An Approximation Algorithm for Maximum Internal Spanning Tree. WALCOM 2017: 385-396 - 2016
- [j69]Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
Randomized Fixed-Parameter Algorithms for the Closest String Problem. Algorithmica 74(1): 466-484 (2016) - [j66]Zhi-Zhong Chen, Fei Deng, Chao Shen, Yiji Wang, Lusheng Wang:
Better ILP-Based Approaches to Haplotype Assembly. J. Comput. Biol. 23(7): 537-552 (2016) - [c44]Zhi-Zhong Chen, Eita Machida, Lusheng Wang:
An Improved Approximation Algorithm for rSPR Distance. COCOON 2016: 468-479 - [c43]Zhi-Zhong Chen, Youta Harada, Eita Machida, Fei Guo, Lusheng Wang:
Better Approximation Algorithms for Scaffolding Problems. FAW 2016: 17-28 - [i7]Zhi-Zhong Chen, Youta Harada, Lusheng Wang:
An Approximation Algorithm for Maximum Internal Spanning Tree. CoRR abs/1608.00196 (2016) - [i6]Zhi-Zhong Chen, Guohui Lin, Lusheng Wang, Yong Chen:
Approximation algorithms for the maximum weight internal spanning tree problem. CoRR abs/1608.03299 (2016) - [i5]Zhi-Zhong Chen, Eita Machida, Lusheng Wang:
A Cubic-Time 2-Approximation Algorithm for rSPR Distance. CoRR abs/1609.04029 (2016) - 2015
- [j65]Zhi-Zhong Chen, Ying Fan, Lusheng Wang:
Faster exact computation of rSPR distance. J. Comb. Optim. 29(3): 605-635 (2015) - 2014
- [j64]Zhi-Zhong Chen, Wenji Ma, Lusheng Wang:
The Parameterized Complexity of the Shared Center Problem. Algorithmica 69(2): 269-293 (2014) - [j63]Zhi-Zhong Chen, Ying Fan, Lusheng Wang:
Parameterized and approximation algorithms for finding two disjoint matchings. Theor. Comput. Sci. 556: 85-93 (2014) - [c42]Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
Randomized and Parameterized Algorithms for the Closest String Problem. CPM 2014: 100-109 - 2013
- [j62]Zhi-Zhong Chen, Fei Deng, Lusheng Wang:
Exact algorithms for haplotype assembly from whole-genome sequence data. Bioinform. 29(16): 1938-1945 (2013) - [j61]Zhi-Zhong Chen, Lusheng Wang:
An Ultrafast Tool for Minimum Reticulate Networks. J. Comput. Biol. 20(1): 38-41 (2013) - [c41]Zhi-Zhong Chen, Lusheng Wang:
Faster Exact Computation of rSPR Distance. FAW-AAIM 2013: 36-47 - [c40]Zhi-Zhong Chen, Fei Deng, Lusheng Wang:
Identifying duplications and lateral gene transfers simultaneously and rapidly. CIBCB 2013: 128-135 - [c39]Zhi-Zhong Chen, Ying Fan, Lusheng Wang:
Parameterized and Approximation Algorithms for Finding Two Disjoint Matchings. COCOA 2013: 1-12 - [i4]Weitian Tong, Zhi-Zhong Chen, Lusheng Wang, Yinfeng Xu, Jiuping Xu, Randy Goebel, Guohui Lin:
An approximation algorithm for the Bandpass-2 problem. CoRR abs/1307.7089 (2013) - 2012
- [j60]Zhi-Zhong Chen, Lusheng Wang, Satoshi Yamanaka:
A fast tool for minimum hybridization networks. BMC Bioinform. 13: 155 (2012) - [j59]Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
A three-string approach to the closest string problem. J. Comput. Syst. Sci. 78(1): 164-178 (2012) - [j58]Zhi-Zhong Chen, Lusheng Wang:
Algorithms for Reticulate Networks of Multiple Phylogenetic Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 9(2): 372-384 (2012) - [j57]Wenji Ma, Yong Yang, Zhi-Zhong Chen, Lusheng Wang:
Mutation Region Detection for Closely Related Individuals without a Known Pedigree. IEEE ACM Trans. Comput. Biol. Bioinform. 9(2): 499-510 (2012) - [j56]Zhi-Zhong Chen, Fei Deng, Lusheng Wang:
Simultaneous Identification of Duplications, Losses, and Lateral Gene Transfers. IEEE ACM Trans. Comput. Biol. Bioinform. 9(5): 1515-1528 (2012) - [c38]Zhi-Zhong Chen, Lusheng Wang:
An Improved Approximation Algorithm for the Bandpass-2 Problem. COCOA 2012: 188-199 - [c37]Zhi-Zhong Chen, Lusheng Wang, Wenji Ma:
The Parameterized Complexity of the Shared Center Problem. CPM 2012: 439-452 - 2011
- [j55]Zhi-Zhong Chen, Guohui Lin, Lusheng Wang:
An Approximation Algorithm for the Minimum Co-Path Set Problem. Algorithmica 60(4): 969-986 (2011) - [j54]Zhi-Zhong Chen, Lusheng Wang:
Fast Exact Algorithms for the Closest String and Substring Problems with Application to the Planted (L, d)-Motif Model. IEEE ACM Trans. Comput. Biol. Bioinform. 8(5): 1400-1410 (2011) - 2010
- [j53]Zhi-Zhong Chen, Lusheng Wang:
HybridNET: a tool for constructing hybridization networks. Bioinform. 26(22): 2912-2913 (2010) - [j52]Zhi-Zhong Chen, Ruka Tanahashi, Lusheng Wang:
Erratum to "An improved randomized approximation algorithm for maximum triangle packing" [Discrete Appl. Math. 157 (2009) 1640-1646]. Discret. Appl. Math. 158(9): 1045-1047 (2010) - [c35]Zhi-Zhong Chen, Michael R. Fellows, Bin Fu, Haitao Jiang, Yang Liu, Lusheng Wang, Binhai Zhu:
A Linear Kernel for Co-Path/Cycle Packing. AAIM 2010: 90-102 - [c34]Zhi-Zhong Chen, Bin Ma, Lusheng Wang:
A Three-String Approach to the Closest String Problem. COCOON 2010: 449-458 - 2009
- [j49]Zhi-Zhong Chen, Lusheng Wang, Zhanyong Wang:
Approximation Algorithms for Reconstructing the Duplication History of Tandem Repeats. Algorithmica 54(4): 501-529 (2009) - [j48]Zhi-Zhong Chen, Ruka Tanahashi, Lusheng Wang:
An improved randomized approximation algorithm for maximum triangle packing. Discret. Appl. Math. 157(7): 1640-1646 (2009) - [j47]Zhi-Zhong Chen, Lusheng Wang:
Improved Approximation Algorithms for Reconstructing the History of Tandem Repeats. IEEE ACM Trans. Comput. Biol. Bioinform. 6(3): 438-453 (2009) - 2008
- [j43]Zhi-Zhong Chen, Ruka Tanahashi, Lusheng Wang:
An improved approximation algorithm for maximum edge 2-coloring in simple graphs. J. Discrete Algorithms 6(2): 205-215 (2008) - [c32]Zhi-Zhong Chen, Ruka Tanahashi, Lusheng Wang:
An Improved Randomized Approximation Algorithm for Maximum Triangle Packing. AAIM 2008: 97-108 - [c31]Zhipeng Cai, Zhi-Zhong Chen, Guohui Lin, Lusheng Wang:
An Improved Approximation Algorithm for the Capacitated Multicast Tree Routing Problem. COCOA 2008: 286-295 - 2007
- [c29]Lusheng Wang, Zhanyong Wang, Zhi-Zhong Chen:
Approximation Algorithms for Reconstructing the Duplication History of Tandem Repeats. COCOON 2007: 493-503 - 2005
- [j34]Zhi-Zhong Chen, Yuusuke Okamoto, Lusheng Wang:
Improved deterministic approximation algorithms for Max TSP. Inf. Process. Lett. 95(2): 333-342 (2005) - [j31]Zhi-Zhong Chen, Lusheng Wang:
An Improved Randomized Approximation Algorithm for Max TSP. J. Comb. Optim. 9(4): 401-432 (2005)
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