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ORCIDJames Geller
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Publications
- 2024
[c126]Mahshad Koohi H. Dehkordi, Navya Martin Kollapally, Yehoshua Perl, James Geller, Fadi P. Deek, Hao Liu, Vipina Kuttichi Keloth, Gai Elhanan, Andrew J. Einstein:
Skimming of Electronic Health Records Highlighted by an Interface Terminology Curated with Machine Learning Mining. BIOSTEC (2) 2024: 498-505- 2023
- [j84]Vipina Kuttichi Keloth
, Shuxin Zhou, Luke Lindemann, Ling Zheng, Gai Elhanan, Andrew J. Einstein, James Geller, Yehoshua Perl:
Mining of EHR for interface terminology concepts for annotating EHRs of COVID patients. BMC Medical Informatics Decis. Mak. 23(1): 40 (2023) - [c122]Mahshad Koohi H. Dehkordi, Andrew J. Einstein, Shuxin Zhou, Gai Elhanan, Yehoshua Perl, Vipina Kuttichi Keloth, James Geller, Hao Liu:
Using annotation for computerized support for fast skimming of cardiology electronic health record notes. BIBM 2023: 4043-4050 - 2020
- [c110]Vipina Kuttichi Keloth, Shuxin Zhou, Andrew J. Einstein, Gai Elhanan, Yan Chen, James Geller, Yehoshua Perl:
Generating Training Data for Concept-Mining for an 'Interface Terminology' Annotating Cardiology EHRs. BIBM 2020: 1728-1735 - [c109]Vipina Kuttichi Keloth, Shuxin Zhou, Luke Lindemann, Gai Elhanan, Andrew J. Einstein, James Geller, Yehoshua Perl:
Mining Concepts for a COVID Interface Terminology for Annotation of EHRs. IEEE BigData 2020: 3753-3760 - 2019
- [j77]Vipina Kuttichi Keloth, Zhe He, Gai Elhanan, James Geller:
Alternative classification of identical concepts in different terminologies: Different ways to view the world. J. Biomed. Informatics 94 (2019) - 2018
- [j76]Ling Zheng, Yan Chen, Gai Elhanan, Yehoshua Perl, James Geller, Christopher Ochs:
Complex overlapping concepts: An effective auditing methodology for families of similarly structured BioPortal ontologies. J. Biomed. Informatics 83: 135-149 (2018) - [c93]Hao Liu, Ling Zheng, Yehoshua Perl, James Geller, Gai Elhanan:
Can a Convolutional Neural Network Support Auditing of NCI Thesaurus Neoplasm Concepts? ICBO 2018 - 2017
- [c88]Zhe He, Yehoshua Perl, Gai Elhanan, Yan Chen, James Geller, Jiang Bian:
Auditing the assignments of top-level semantic types in the UMLS semantic network to UMLS concepts. BIBM 2017: 1262-1269 - [c84]Ling Zheng, Yehoshua Perl, Gai Elhanan, Christopher Ochs, James Geller, Michael Halper:
Summarizing an Ontology: A "Big Knowledge" Coverage Approach. MedInfo 2017: 978-982 - 2016
- [c80]Ling Zheng, Yehoshua Perl, James Geller, Gai Elhanan:
How to Summarize Big Knowledge Subjects. ICBO/BioCreative 2016 - 2013
- [c66]Zhe He, Christopher Ochs, Ankur Agrawal, Yehoshua Perl, Dimitris Zeginis, Konstantinos A. Tarabanis, Gai Elhanan, Michael Halper, Natasha F. Noy, James Geller:
A Family-Based Framework for Supporting Quality Assurance of Biomedical Ontologies in BioPortal. AMIA 2013 - [c65]Christopher Ochs, Yehoshua Perl, James Geller, Michael Halper, Huanying Helen Gu, Yan Chen, Gai Elhanan:
Scalability of Abstraction-Network-Based Quality Assurance to Large SNOMED Hierarchies. AMIA 2013 - 2012
- [j58]Huanying Gu, Gai Elhanan, Yehoshua Perl, George Hripcsak, James J. Cimino, Julia Xu, Yan Chen, James Geller, C. Paul Morrey:
A study of terminology auditors' performance for UMLS semantic type assignments. J. Biomed. Informatics 45(6): 1042-1048 (2012) - 2011
- [j57]Kuo-Chuan Huang, James Geller, Michael Halper, Gai Elhanan, Yehoshua Perl:
Scalability of Piecewise Synonym Identification in Integration of SNOMED into the UMLS. Int. J. Comput. Model. Algorithms Medicine 2(3): 26-45 (2011) - [j56]Gai Elhanan, Yehoshua Perl, James Geller:
A survey of SNOMED CT direct users, 2010: impressions and preferences regarding content and quality. J. Am. Medical Informatics Assoc. 18(Supplement): 36-44 (2011) - 2009
- [c49]James Geller, C. Paul Morrey, Junchuan Xu, Michael Halper, Gai Elhanan, Yehoshua Perl, George Hripcsak:
Comparing Inconsistent Relationship Configurations Indicating UMLS Errors. AMIA 2009 - [c48]Duo Helen Wei, Michael Halper, Gai Elhanan, Yan Chen, Yehoshua Perl, James Geller, Kent A. Spackman:
Auditing SNOMED Relationships Using a Converse Abstraction Network. AMIA 2009 - 2007
- [c44]Huanying Gu, George Hripcsak, Yan Chen, C. Paul Morrey, Gai Elhanan, James J. Cimino, James Geller, Yehoshua Perl:
Evaluation of a UMLS Auditing Process of Semantic Type Assignments. AMIA 2007
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