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Yoshinori Tamada
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Publications
- 2012
- [j8]Kentaro Ogami, Rui Yamaguchi, Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Cristin G. Print, Satoru Miyano:
Computational gene network analysis reveals TNF-induced angiogenesis. BMC Syst. Biol. 6(S-2): S12 (2012) - 2011
- [j7]Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano:
SiGN-SSM: open source parallel software for estimating gene networks with state space models. Bioinform. 27(8): 1172-1173 (2011) - [j6]Yoshinori Tamada, Seiya Imoto, Satoru Miyano:
Parallel Algorithm for Learning Optimal Bayesian Network Structure. J. Mach. Learn. Res. 12: 2437-2459 (2011) - [j5]Yoshinori Tamada, Seiya Imoto, Hiromitsu Araki, Masao Nagasaki, Cristin G. Print, Stephen D. Charnock-Jones, Satoru Miyano:
Estimating Genome-Wide Gene Networks Using Nonparametric Bayesian Network Models on Massively Parallel Computers. IEEE ACM Trans. Comput. Biol. Bioinform. 8(3): 683-697 (2011) - [p1]Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Satoru Miyano:
Computational Drug Target Pathway Discovery: A Bayesian Network Approach. Handbook of Statistical Bioinformatics 2011: 501-532 - 2010
- [c13]Seiya Imoto, Kaname Kojima, Eric Perrier, Yoshinori Tamada, Satoru Miyano:
Searching Optimal Bayesian Network Structure on Constraint Search Space: Super-Structure Approach. JSAI-isAI Workshops 2010: 210-218 - 2009
- [c12]Satoru Miyano, Rui Yamaguchi, Yoshinori Tamada, Masao Nagasaki, Seiya Imoto:
Gene Networks Viewed through Two Models. BICoB 2009: 54-66 - [c11]Yoshinori Tamada, Hiromitsu Araki, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Yukiko Nakanishi, Yuki Tomiyasu, Kaori Yasuda, Ben Dunmore, Deborah Sanders, Sally Humphreys, Cristin G. Print, Stephen D. Charnock-Jones, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano:
Unraveling Dynamic Activities of Autocrine Pathways that Control Drug-Response Transcriptome Networks. Pacific Symposium on Biocomputing 2009: 251-263 - 2006
- [c9]Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Kaori Yasuda, Cristin G. Print, Stephen D. Charnock-Jones, Deborah Sanders, Christopher J. Savoie, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano:
Computational Strategy for Discovering Druggable Gene Networks from Genome-Wide RNA Expression Profiles. Pacific Symposium on Biocomputing 2006: 559-571 - 2005
- [j4]Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Toshiaki Katayama, Minoru Kanehisa, Satoru Miyano:
Utilizing Evolutionary Information and Gene Expression Data for Estimating Gene Networks with Bayesian Network Models. J. Bioinform. Comput. Biol. 3(6): 1295-1314 (2005) - [c8]Naoki Nariai, Yoshinori Tamada, Seiya Imoto, Satoru Miyano:
Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data. ECCB/JBI 2005: 212 - [c7]Osamu Hirose, Naoki Nariai, Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Satoru Miyano:
Estimating Gene Networks from Expression Data and Binding Location Data via Boolean Networks. ICCSA (3) 2005: 349-356 - 2003
- [c6]Yoshinori Tamada, SunYong Kim, Hideo Bannai, Seiya Imoto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano:
Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection. ECCB 2003: 227-236 - [c5]Sascha Ott, Yoshinori Tamada, Hideo Bannai, Kenta Nakai, Satoru Miyano:
Intrasplicing - Analysis of Long Intron Sequences. Pacific Symposium on Biocomputing 2003: 339-350 - 2002
- [j3]Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Kenta Nakai, Satoru Miyano:
Extensive feature detection of N-terminal protein sorting signals. Bioinform. 18(2): 298-305 (2002) - [j2]Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano:
Fast algorithm for extracting multiple unordered short motifs using bit operations. Inf. Sci. 146(1-4): 115-126 (2002) - [c4]Yoshinori Tamada, Hideo Bannai, Osamu Maruyama, Satoru Miyano:
Foundations of Designing Computational Knowledge Discovery Processes. Progress in Discovery Science 2002: 459-470 - [c3]Osamu Maruyama, Satoru Kuhara, Hideo Bannai, Satoru Miyano, Yoshinori Tamada:
Fast Algorithm for Extracting Multiple Unordered Short Motifs Using Bit Operations. JCIS 2002: 1180-1185 - 2001
- [j1]Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano:
HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process. Electron. Trans. Artif. Intell. 5(B): 73-83 (2001) - [c2]Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano:
VML: A View Modeling Language for Computational Knowledge Discovery. Discovery Science 2001: 30-44 - [c1]Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Kenta Nakai, Satoru Miyano:
Views: Fundamental Building Blocks in the Process of Knowledge Discovery. FLAIRS 2001: 233-238
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