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ORCIDMariusz Popenda
- > Home > Persons > Mariusz Popenda
Publications
- 2022
[j14]Kamil Luwanski, Vladyslav Hlushchenko, Mariusz Popenda, Tomasz Zok
, Joanna Sarzynska, Daniil Martsich, Marta Szachniuk, Maciej Antczak:
RNAspider: a webserver to analyze entanglements in RNA 3D structures. Nucleic Acids Res. 50(W1): 663-669 (2022)- 2020
- [j13]Tomasz Zok, Jan Badura, Sylwester Swat, Kacper Figurski, Mariusz Popenda, Maciej Antczak:
New models and algorithms for RNA pseudoknot order assignment. Int. J. Appl. Math. Comput. Sci. 30(2): 315-324 (2020) - 2018
- [j10]Maciej Antczak, Mariusz Popenda, Tomasz Zok, Michal Zurkowski, Ryszard W. Adamiak, Marta Szachniuk:
New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation. Bioinform. 34(8): 1304-1312 (2018) - [j9]Maciej Antczak, Tomasz Zok, Maciej Osowiecki, Mariusz Popenda, Ryszard W. Adamiak, Marta Szachniuk:
RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures. BMC Bioinform. 19(1): 304:1-304:11 (2018) - [j8]Tomasz Zok, Maciej Antczak, Michal Zurkowski, Mariusz Popenda, Jacek Blazewicz, Ryszard W. Adamiak, Marta Szachniuk:
RNApdbee 2.0: multifunctional tool for RNA structure annotation. Nucleic Acids Res. 46(Webserver-Issue): W30-W35 (2018) - 2015
- [j7]Agnieszka Rybarczyk, Natalia Szostak, Maciej Antczak, Tomasz Zok, Mariusz Popenda, Ryszard W. Adamiak, Jacek Blazewicz, Marta Szachniuk:
New in silico approach to assessing RNA secondary structures with non-canonical base pairs. BMC Bioinform. 16: 276:1-276:12 (2015) - [j6]Piotr Lukasiak, Maciej Antczak, Tomasz Ratajczak, Marta Szachniuk, Mariusz Popenda, Ryszard W. Adamiak, Jacek Blazewicz:
RNAssess - a web server for quality assessment of RNA 3D structures. Nucleic Acids Res. 43(Webserver-Issue): W502-W506 (2015) - 2014
- [j4]Maciej Antczak, Tomasz Zok, Mariusz Popenda, Piotr Lukasiak, Ryszard W. Adamiak, Jacek Blazewicz, Marta Szachniuk:
RNApdbee - a webserver to derive secondary structures from pdb files of knotted and unknotted RNAs. Nucleic Acids Res. 42(Webserver-Issue): 368-372 (2014)
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