Ernst Houtgast

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▷ joint publications with Vlad Mihai Sima

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Publications

2018
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Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths. Comput. Biol. Chem. 75: 54-64 (2018)
[c10]
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Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM. BIBE 2018: 243-246
2017
[c9]
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Ernst Houtgast, Vlad Mihai Sima, Zaid Al-Ars:
High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL. BIBE 2017: 492-496
2016
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Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM. SIGARCH Comput. Archit. News 44(4): 38-43 (2016)
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Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing. ARCS 2016: 130-142
[c7]
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Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms. FCCM 2016: 28
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Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms. ReConFig 2016: 1-8
2015
[c5]
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  - conf/iccad/AhmedSHBA15
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Nauman Ahmed, Vlad Mihai Sima, Ernst Houtgast, Koen Bertels, Zaid Al-Ars:
Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm. ICCAD 2015: 240-246
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Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm. SAMOS 2015: 221-227

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