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ORCIDAlex Zelikovsky
- > Home > Persons > Alex Zelikovsky
Publications
- 2017
[j67]Alexander Artyomenko, Nicholas C. Wu
, Serghei Mangul, Eleazar Eskin, Ren Sun, Alex Zelikovsky:
Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants. J. Comput. Biol. 24(6): 558-570 (2017)- [c119]Pelin Icer Baykal, Alexander Artyomenko, Sumathi Ramachandran, Yury Khudyakov, Alex Zelikovsky, Pavel Skums:
Assessment of HCV infection stage as recent or chronic using multi-parameter analysis and machine learning. ICCABS 2017: 1 - [c116]Alexander Artyomenko, Pelin B. Icer, Pavel Skums, Sumathi Ramachandran, Yury Khudyakov, Alex Zelikovsky:
Agent-Based in Silico Evolution of HCV Quasispecies. ISBRA 2017: 420-424 - 2016
- [c113]Alexander Artyomenko, Nicholas C. Wu, Serghei Mangul, Eleazar Eskin, Ren Sun, Alex Zelikovsky:
Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants. RECOMB 2016: 164-175 - 2015
- [j63]Pavel Skums, Alexander Artyomenko, Olga Glebova, Sumathi Ramachandran, Ion I. Mandoiu, David S. Campo, Zoya Dimitrova, Alex Zelikovsky, Yuri Khudyakov:
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling. Bioinform. 31(5): 682-690 (2015) - [c112]Alexander Artyomenko, Nicholas C. Wu, Serghei Mangul, Eleazar Eskin, Ren Sun, Alex Zelikovsky:
2SNV: Quasispecies reconstruction from PacBio reads. ICCABS 2015: 1 - 2014
- [c107]Alexander Artyomenko, Serghei Mangul, Nicholas C. Wu, Eleazar Eskin, Ren Sun, Alex Zelikovsky:
Reconstruction of influenza a virus variants from PacBio reads. ICCABS 2014: 1 - [c106]Adrian Caciula, Olga Glebova, Alexander Artyomenko, Serghei Mangul, James Lindsay, Ion I. Mandoiu, Alex Zelikovsky:
Deterministic regression algorithm for transcriptome frequency estimation. ICCABS 2014: 1 - [c103]Pavel Skums, Alexander Artyomenko, Olga Glebova, Alex Zelikovsky, David S. Campo, Zoya Dimitrova, Yuri Khudyakov:
Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data. ICCABS 2014: 1 - 2013
- [j58]Pavel Skums, Nicholas Mancuso, Alexander Artyomenko, Bassam Tork, Ion I. Mandoiu, Yuri Khudyakov, Alex Zelikovsky:
Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows. BMC Bioinform. 14(S-9): S2 (2013) - [c102]Alexander Artyomenko, Nicholas Mancuso, Alex Zelikovsky, Pavel Skums, Ion I. Mandoiu:
kGEM: An EM-based algorithm for local reconstruction of viral quasispecies. ICCABS 2013: 1 - [c99]Nicholas Mancuso, Alexander Artyomenko, Alex Zelikovsky, Pavel Skums, Ion I. Mandoiu:
Estimation of viral population structure from amplicon-based reads. ICCABS 2013: 1
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